WormBase Tree Display for Feature: WBsf011184
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| WBsf011184 | SMap | S_parent | Sequence | T14B4 | |
|---|---|---|---|---|---|
| Sequence_details | Flanking_sequences | ACTAACTTCTAATTCTTTATAATATTTCAG | GTAACCGAGGTTGTCGAAGAGACCGTCGTC | ||
| Mapping_target | T14B4 | ||||
| Origin | Species | Caenorhabditis elegans | |||
| History | Acquires_merge | WBsf016267 | |||
| Visible | Description | SL1 trans-splice leader acceptor site | |||
| SO_term | SO:0000706 | ||||
| Defined_by | Defined_by_sequence | yk816b05.5 | Curator_confirmed | WBPerson1846 | |
| Inferred_automatically | make_missing_tsl_features.pl | ||||
| yk1366b06.5 | Curator_confirmed | WBPerson1846 | |||
| Inferred_automatically | make_missing_tsl_features.pl | ||||
| yk1393b05.5 | Curator_confirmed | WBPerson1846 | |||
| Inferred_automatically | make_missing_tsl_features.pl | ||||
| yk1467d08.5 | Curator_confirmed | WBPerson1846 | |||
| Inferred_automatically | make_missing_tsl_features.pl | ||||
| yk1472e02.5 | Curator_confirmed | WBPerson1846 | |||
| Inferred_automatically | make_missing_tsl_features.pl | ||||
| yk1573c11.5 | Curator_confirmed | WBPerson1846 | |||
| Inferred_automatically | make_missing_tsl_features.pl | ||||
| yk1583h03.5 | Curator_confirmed | WBPerson1846 | |||
| Inferred_automatically | make_missing_tsl_features.pl | ||||
| yk1666c11.5 | Curator_confirmed | WBPerson1846 | |||
| Inferred_automatically | make_missing_tsl_features.pl | ||||
| yk1692g07.5 | Curator_confirmed | WBPerson1846 | |||
| Inferred_automatically | make_missing_tsl_features.pl | ||||
| yk1700e03.5 | Curator_confirmed | WBPerson1846 | |||
| Inferred_automatically | make_missing_tsl_features.pl | ||||
| yk1703g02.5 | Curator_confirmed | WBPerson1846 | |||
| Inferred_automatically | make_missing_tsl_features.pl | ||||
| yk1709f05.5 | Curator_confirmed | WBPerson1846 | |||
| Inferred_automatically | make_missing_tsl_features.pl | ||||
| yk1710c08.5 | Curator_confirmed | WBPerson1846 | |||
| Inferred_automatically | make_missing_tsl_features.pl | ||||
| yk1729a01.5 | Curator_confirmed | WBPerson1846 | |||
| Inferred_automatically | make_missing_tsl_features.pl | ||||
| yk1737f11.5 | Curator_confirmed | WBPerson1846 | |||
| Inferred_automatically | make_missing_tsl_features.pl | ||||
| yk1743g01.5 | Curator_confirmed | WBPerson1846 | |||
| Inferred_automatically | make_missing_tsl_features.pl | ||||
| ce1012803ah0602 | Curator_confirmed | WBPerson1846 | |||
| SW026-14_K2105 | Paper_evidence | WBPaper00006407 | |||
| Inferred_automatically | ace-TEC_RED.pl | ||||
| Adult_spe-9_23dC_8days_post-L4_molt_bundle_of_reads_supporting_sl1_II_6712172_6712173_-_wb170 | |||||
| dauer_entry_daf-2_25dC_48hrs_post-L1_bundle_of_reads_supporting_sl1_II_6712172_6712173_-_wb170 | |||||
| Adult_spe-9_23dC_8days_post-L4_molt_bundle_of_reads_supporting_SL1_II_6712171_6712172_-_wb170 | |||||
| dauer_daf-2_25dC_91hrs_post-L1_bundle_of_reads_supporting_SL1_II_6712171_6712172_-_wb170 | |||||
| dauer_entry_daf-2_25dC_48hrs_post-L1_bundle_of_reads_supporting_SL1_II_6712171_6712172_-_wb170 | |||||
| early_embryo_bundle_of_reads_supporting_SL1_II_6712171_6712172_-_wb170 | |||||
| embryo_him-8_20dC_post-L1_bundle_of_reads_supporting_SL1_II_6712171_6712172_-_wb170 | |||||
| late_embryo_20dC_4.5hrs_post-early_embryo_bundle_of_reads_supporting_SL1_II_6712171_6712172_-_wb170 | |||||
| lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_bundle_of_reads_supporting_SL1_II_6712171_6712172_-_wb170 | |||||
| male_mid-L4_25dC_30hrs_post-L1_bundle_of_reads_supporting_SL1_II_6712171_6712172_-_wb170 | |||||
| mid-L1_20dC_4hrs_post-L1_bundle_of_reads_supporting_SL1_II_6712171_6712172_-_wb170 | |||||
| mid-L2_20dC_14hrs_post-L1_bundle_of_reads_supporting_SL1_II_6712171_6712172_-_wb170 | |||||
| mid-L3_20dC_25hrs_post-L1_bundle_of_reads_supporting_SL1_II_6712171_6712172_-_wb170 | |||||
| mid-L4_20dC_36hrs_post-L1_bundle_of_reads_supporting_SL1_II_6712171_6712172_-_wb170 | |||||
| elegans_PE_SS_GG2997|c5_g1_i1 | Inferred_automatically | make_missing_tsl_features.pl | |||
| Defined_by_paper | WBPaper00037948 | ||||
| Defined_by_analysis | TEC-RED | ||||
| RNASeq.elegans.N2.WBls:0000027.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX001872 | 7 | ||||
| RNASeq.elegans.N2.WBls:0000035.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX001875 | 2 | ||||
| RNASeq.elegans.N2.WBls:0000004.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX004864 | 24 | ||||
| RNASeq.elegans.N2.WBls:0000021.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX004866 | 60 | ||||
| RNASeq.elegans.CB4689.WBls:0000038.Male.WBbt:0007833.PRJNA33023.SRX004868 | 3 | ||||
| RNASeq.elegans.MT10430.WBls:0000024.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX004869 | 1 | ||||
| RNASeq.elegans.BA671.WBls:0000041.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX008136 | 1 | ||||
| RNASeq.elegans.CB1370.WBls:0000031.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX008139 | 5 | ||||
| RNASeq.elegans.N2.WBls:0000038.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX008144 | 7 | ||||
| RNASeq.elegans.CB1489.WBls:0000003.Male.WBbt:0007833.PRJNA33023.SRX011569 | 30 | ||||
| RNASeq.elegans.N2.WBls:0000063.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX014006 | 3 | ||||
| RNASeq.elegans.N2.WBls:0000063.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX014007 | 3 | ||||
| RNASeq.elegans.N2.WBls:0000063.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX014008 | 22 | ||||
| RNASeq.elegans.N2.WBls:0000063.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX014009 | 4 | ||||
| RNASeq.elegans.JK1107.WBls:0000038.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX014010 | 54 | ||||
| RNASeq.elegans.N2.WBls:0000035.Hermaphrodite.WBbt:0007833.PRJNA51225.SRX026728 | 1 | ||||
| RNASeq.elegans.N2.WBls:0000024.Hermaphrodite.WBbt:0007833.PRJNA51225.SRX026729 | 1 | ||||
| RNASeq.elegans.N2.WBls:0000041.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX035162 | 1 | ||||
| RNASeq.elegans.N2.WBls:0000035.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX036881 | 54 | ||||
| RNASeq.elegans.N2.WBls:0000041.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX036882 | 2 | ||||
| RNASeq.elegans.N2.WBls:0000041.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX036970 | 5 | ||||
| RNASeq.elegans.N2.WBls:0000004.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX037186 | 14 | ||||
| RNASeq.elegans.N2.WBls:0000004.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX037197 | 15 | ||||
| RNASeq.elegans.CB1489.WBls:0000003.Male.WBbt:0007833.PRJNA33023.SRX037198 | 58 | ||||
| RNASeq.elegans.JK1107.WBls:0000038.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX037200 | 45 | ||||
| RNASeq.elegans.N2.WBls:0000021.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX047446 | 40 | ||||
| RNASeq.elegans.CB4689.WBls:0000038.Male.WBbt:0007833.PRJNA33023.SRX047469 | 34 | ||||
| RNASeq.elegans.N2.WBls:0000027.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX047653 | 15 | ||||
| RNASeq.elegans.N2.WBls:0000063.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX047787 | 1 | ||||
| RNASeq.elegans.N2.WBls:0000021.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX049270 | 2 | ||||
| RNASeq.elegans.N2.WBls:0000004.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX085111 | 1 | ||||
| RNASeq.elegans.N2.WBls:0000010.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX085217 | 2 | ||||
| RNASeq.elegans.N2.WBls:0000010.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX085218 | 10 | ||||
| RNASeq.elegans.N2.WBls:0000021.Hermaphrodite.WBbt:0005451.PRJNA33023.SRX085286 | 1 | ||||
| RNASeq.elegans.N2.WBls:0000004.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX092371 | 1 | ||||
| RNASeq.elegans.N2.WBls:0000004.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX092372 | 4 | ||||
| RNASeq.elegans.N2.WBls:0000004.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX092477 | 1 | ||||
| RNASeq.elegans.N2.WBls:0000004.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX092478 | 1 | ||||
| RNASeq.elegans.N2.WBls:0000004.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX092479 | 2 | ||||
| RNASeq.elegans.N2.WBls:0000004.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX092480 | 1 | ||||
| RNASeq.elegans.N2.WBls:0000063.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX103986 | 1 | ||||
| RNASeq.elegans.N2.WBls:0000008.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX145480 | 3 | ||||
| RNASeq.elegans.N2.WBls:0000004.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX145486 | 16 | ||||
| RNASeq.elegans.N2.WBls:0000004.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX145660 | 9 | ||||
| RNASeq.elegans.N2.WBls:0000027.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX145661 | 100 | ||||
| RNASeq.elegans.N2.WBls:0000027.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX151607 | 46 | ||||
| RNASeq.elegans.N2.WBls:0000041.Hermaphrodite.WBbt:0005175.PRJNA33023.SRX151618 | 1 | ||||
| Associations | Associated_with_CDS | T14B4.7 | |||
| Associated_with_transcript | T14B4.7.1 | ||||
| Remark | Defined by RNASeq data from RNASeq.elegans.N2.WBls:0000027.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX001872 with 7 reads | ||||
| Defined by RNASeq data from RNASeq.elegans.N2.WBls:0000035.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX001875 with 2 reads | |||||
| Defined by RNASeq data from RNASeq.elegans.N2.WBls:0000004.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX004864 with 24 reads | |||||
| Defined by RNASeq data from RNASeq.elegans.N2.WBls:0000021.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX004866 with 60 reads | |||||
| Defined by RNASeq data from RNASeq.elegans.CB4689.WBls:0000038.Male.WBbt:0007833.PRJNA33023.SRX004868 with 3 reads | |||||
| Defined by RNASeq data from RNASeq.elegans.MT10430.WBls:0000024.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX004869 with 1 reads | |||||
| Defined by RNASeq data from RNASeq.elegans.BA671.WBls:0000041.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX008136 with 1 reads | |||||
| Defined by RNASeq data from RNASeq.elegans.CB1370.WBls:0000031.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX008139 with 5 reads | |||||
| Defined by RNASeq data from RNASeq.elegans.N2.WBls:0000038.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX008144 with 7 reads | |||||
| Defined by RNASeq data from RNASeq.elegans.CB1489.WBls:0000003.Male.WBbt:0007833.PRJNA33023.SRX011569 with 30 reads | |||||
| Defined by RNASeq data from RNASeq.elegans.N2.WBls:0000063.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX014006 with 3 reads | |||||
| Defined by RNASeq data from RNASeq.elegans.N2.WBls:0000063.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX014007 with 3 reads | |||||
| Defined by RNASeq data from RNASeq.elegans.N2.WBls:0000063.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX014008 with 22 reads | |||||
| Defined by RNASeq data from RNASeq.elegans.N2.WBls:0000063.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX014009 with 4 reads | |||||
| Defined by RNASeq data from RNASeq.elegans.JK1107.WBls:0000038.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX014010 with 54 reads | |||||
| Defined by RNASeq data from RNASeq.elegans.N2.WBls:0000035.Hermaphrodite.WBbt:0007833.PRJNA51225.SRX026728 with 1 reads | |||||
| Defined by RNASeq data from RNASeq.elegans.N2.WBls:0000024.Hermaphrodite.WBbt:0007833.PRJNA51225.SRX026729 with 1 reads | |||||
| Defined by RNASeq data from RNASeq.elegans.N2.WBls:0000041.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX035162 with 1 reads | |||||
| Defined by RNASeq data from RNASeq.elegans.N2.WBls:0000035.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX036881 with 54 reads | |||||
| Defined by RNASeq data from RNASeq.elegans.N2.WBls:0000041.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX036882 with 2 reads | |||||
| Defined by RNASeq data from RNASeq.elegans.N2.WBls:0000041.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX036970 with 5 reads | |||||
| Defined by RNASeq data from RNASeq.elegans.N2.WBls:0000004.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX037186 with 14 reads | |||||
| Defined by RNASeq data from RNASeq.elegans.N2.WBls:0000004.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX037197 with 15 reads | |||||
| Defined by RNASeq data from RNASeq.elegans.CB1489.WBls:0000003.Male.WBbt:0007833.PRJNA33023.SRX037198 with 58 reads | |||||
| Defined by RNASeq data from RNASeq.elegans.JK1107.WBls:0000038.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX037200 with 45 reads | |||||
| Defined by RNASeq data from RNASeq.elegans.N2.WBls:0000021.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX047446 with 40 reads | |||||
| Defined by RNASeq data from RNASeq.elegans.CB4689.WBls:0000038.Male.WBbt:0007833.PRJNA33023.SRX047469 with 34 reads | |||||
| Defined by RNASeq data from RNASeq.elegans.N2.WBls:0000027.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX047653 with 15 reads | |||||
| Defined by RNASeq data from RNASeq.elegans.N2.WBls:0000063.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX047787 with 1 reads | |||||
| Defined by RNASeq data from RNASeq.elegans.N2.WBls:0000021.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX049270 with 2 reads | |||||
| Defined by RNASeq data from RNASeq.elegans.N2.WBls:0000004.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX085111 with 1 reads | |||||
| Defined by RNASeq data from RNASeq.elegans.N2.WBls:0000010.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX085217 with 2 reads | |||||
| Defined by RNASeq data from RNASeq.elegans.N2.WBls:0000010.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX085218 with 10 reads | |||||
| Defined by RNASeq data from RNASeq.elegans.N2.WBls:0000021.Hermaphrodite.WBbt:0005451.PRJNA33023.SRX085286 with 1 reads | |||||
| Defined by RNASeq data from RNASeq.elegans.N2.WBls:0000004.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX092371 with 1 reads | |||||
| Defined by RNASeq data from RNASeq.elegans.N2.WBls:0000004.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX092372 with 4 reads | |||||
| Defined by RNASeq data from RNASeq.elegans.N2.WBls:0000004.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX092477 with 1 reads | |||||
| Defined by RNASeq data from RNASeq.elegans.N2.WBls:0000004.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX092478 with 1 reads | |||||
| Defined by RNASeq data from RNASeq.elegans.N2.WBls:0000004.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX092479 with 2 reads | |||||
| Defined by RNASeq data from RNASeq.elegans.N2.WBls:0000004.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX092480 with 1 reads | |||||
| Defined by RNASeq data from RNASeq.elegans.N2.WBls:0000063.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX103986 with 1 reads | |||||
| Defined by RNASeq data from RNASeq.elegans.N2.WBls:0000008.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX145480 with 3 reads | |||||
| Defined by RNASeq data from RNASeq.elegans.N2.WBls:0000004.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX145486 with 16 reads | |||||
| Defined by RNASeq data from RNASeq.elegans.N2.WBls:0000004.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX145660 with 9 reads | |||||
| Defined by RNASeq data from RNASeq.elegans.N2.WBls:0000027.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX145661 with 100 reads | |||||
| Defined by RNASeq data from RNASeq.elegans.N2.WBls:0000027.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX151607 with 46 reads | |||||
| Defined by RNASeq data from RNASeq.elegans.N2.WBls:0000041.Hermaphrodite.WBbt:0005175.PRJNA33023.SRX151618 with 1 reads | |||||
| Method | SL1 |
