Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Feature: WBsf019340

expand all nodes | collapse all nodes | view schema

Name Class

WBsf019340SMapS_parentSequenceT21D12
Sequence_detailsFlanking_sequencesATTTCTTGTTTTCAATACTTATTATTGCAGAATGGAACCGTCCAACATATGGCGGACGTC
Mapping_targetT21D12
OriginSpeciesCaenorhabditis elegans
VisibleDescriptionSL1 trans-splice leader acceptor site
SO_termSO:0000706
Defined_byDefined_by_sequenceyk1520d10.5Curator_confirmedWBPerson1846
Inferred_automaticallymake_missing_tsl_features.pl
yk1584g05.5Curator_confirmedWBPerson1846
Inferred_automaticallymake_missing_tsl_features.pl
Adult_spe-9_23dC_8days_post-L4_molt_bundle_of_reads_supporting_sl1_IV_259205_259206_-_wb170
dauer_entry_daf-2_25dC_48hrs_post-L1_bundle_of_reads_supporting_sl1_IV_259205_259206_-_wb170
dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_bundle_of_reads_supporting_sl1_IV_259205_259206_-_wb170
Adult_spe-9_23dC_8days_post-L4_molt_bundle_of_reads_supporting_SL1_IV_259204_259205_-_wb170
dauer_entry_daf-2_25dC_48hrs_post-L1_bundle_of_reads_supporting_SL1_IV_259204_259205_-_wb170
dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_bundle_of_reads_supporting_SL1_IV_259204_259205_-_wb170
embryo_him-8_20dC_post-L1_bundle_of_reads_supporting_SL1_IV_259204_259205_-_wb170
late_embryo_20dC_4.5hrs_post-early_embryo_bundle_of_reads_supporting_SL1_IV_259204_259205_-_wb170
lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_bundle_of_reads_supporting_SL1_IV_259204_259205_-_wb170
male_mid-L4_25dC_30hrs_post-L1_bundle_of_reads_supporting_SL1_IV_259204_259205_-_wb170
mid-L1_20dC_4hrs_post-L1_bundle_of_reads_supporting_SL1_IV_259204_259205_-_wb170
mid-L2_20dC_14hrs_post-L1_bundle_of_reads_supporting_SL1_IV_259204_259205_-_wb170
mid-L3_20dC_25hrs_post-L1_bundle_of_reads_supporting_SL1_IV_259204_259205_-_wb170
mid-L4_20dC_36hrs_post-L1_bundle_of_reads_supporting_SL1_IV_259204_259205_-_wb170
Young_Adult_25dC_46hrs_post-L1_bundle_of_reads_supporting_SL1_IV_259204_259205_-_wb170
elegans_PE_SS_GG4129|c1_g1_i2Inferred_automaticallymake_missing_tsl_features.pl
Defined_by_paperWBPaper00037948
Defined_by_analysisRNASeq.elegans.N2.WBls:0000027.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX0018726
RNASeq.elegans.N2.WBls:0000038.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX0018741
RNASeq.elegans.N2.WBls:0000035.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX0018758
RNASeq.elegans.N2.WBls:0000021.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX0048661
RNASeq.elegans.CB4689.WBls:0000038.Male.WBbt:0007833.PRJNA33023.SRX0048685
RNASeq.elegans.CB1370.WBls:0000031.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX0081392
RNASeq.elegans.CB1370.WBls:0000052.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX0081403
RNASeq.elegans.N2.WBls:0000038.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX0081442
RNASeq.elegans.CB1489.WBls:0000003.Male.WBbt:0007833.PRJNA33023.SRX0115691
RNASeq.elegans.N2.WBls:0000063.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX0140061
RNASeq.elegans.N2.WBls:0000063.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX01400822
RNASeq.elegans.N2.WBls:0000063.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX0140091
RNASeq.elegans.JK1107.WBls:0000038.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX014010102
RNASeq.elegans.N2.WBls:0000024.Hermaphrodite.WBbt:0007833.PRJNA128465.SRX0282012
RNASeq.elegans.N2.WBls:0000035.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX0368811
RNASeq.elegans.N2.WBls:0000041.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX0369701
RNASeq.elegans.JK1107.WBls:0000038.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX03720034
RNASeq.elegans.CB4689.WBls:0000038.Male.WBbt:0007833.PRJNA33023.SRX04746916
RNASeq.elegans.N2.WBls:0000063.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX1039861
RNASeq.elegans.N2.WBls:0000027.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX14566138
RNASeq.elegans.N2.WBls:0000027.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX15160781
AssociationsAssociated_with_CDST21D12.2a
Associated_with_transcriptT21D12.2a.1
RemarkDefined by RNASeq data from RNASeq.elegans.N2.WBls:0000027.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX001872 with 6 reads
Defined by RNASeq data from RNASeq.elegans.N2.WBls:0000038.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX001874 with 1 reads
Defined by RNASeq data from RNASeq.elegans.N2.WBls:0000035.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX001875 with 8 reads
Defined by RNASeq data from RNASeq.elegans.N2.WBls:0000021.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX004866 with 1 reads
Defined by RNASeq data from RNASeq.elegans.CB4689.WBls:0000038.Male.WBbt:0007833.PRJNA33023.SRX004868 with 5 reads
Defined by RNASeq data from RNASeq.elegans.CB1370.WBls:0000031.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX008139 with 2 reads
Defined by RNASeq data from RNASeq.elegans.CB1370.WBls:0000052.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX008140 with 3 reads
Defined by RNASeq data from RNASeq.elegans.N2.WBls:0000038.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX008144 with 2 reads
Defined by RNASeq data from RNASeq.elegans.CB1489.WBls:0000003.Male.WBbt:0007833.PRJNA33023.SRX011569 with 1 reads
Defined by RNASeq data from RNASeq.elegans.N2.WBls:0000063.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX014006 with 1 reads
Defined by RNASeq data from RNASeq.elegans.N2.WBls:0000063.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX014008 with 22 reads
Defined by RNASeq data from RNASeq.elegans.N2.WBls:0000063.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX014009 with 1 reads
Defined by RNASeq data from RNASeq.elegans.JK1107.WBls:0000038.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX014010 with 102 reads
Defined by RNASeq data from RNASeq.elegans.N2.WBls:0000024.Hermaphrodite.WBbt:0007833.PRJNA128465.SRX028201 with 2 reads
Defined by RNASeq data from RNASeq.elegans.N2.WBls:0000035.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX036881 with 1 reads
Defined by RNASeq data from RNASeq.elegans.N2.WBls:0000041.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX036970 with 1 reads
Defined by RNASeq data from RNASeq.elegans.JK1107.WBls:0000038.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX037200 with 34 reads
Defined by RNASeq data from RNASeq.elegans.CB4689.WBls:0000038.Male.WBbt:0007833.PRJNA33023.SRX047469 with 16 reads
Defined by RNASeq data from RNASeq.elegans.N2.WBls:0000063.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX103986 with 1 reads
Defined by RNASeq data from RNASeq.elegans.N2.WBls:0000027.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX145661 with 38 reads
Defined by RNASeq data from RNASeq.elegans.N2.WBls:0000027.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX151607 with 81 reads
MethodSL1