WormBase Tree Display for Feature: WBsf019532
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| WBsf019532 | SMap | S_parent | Sequence | T23F2 | |
|---|---|---|---|---|---|
| Sequence_details | Flanking_sequences | GTGAAAAAAATACAACAATTCAATTTCTAG | ATGCACGTGGTTATTGTCCATCCTGAACAA | ||
| Mapping_target | T23F2 | ||||
| Origin | Species | Caenorhabditis elegans | |||
| Visible | Description | SL1 trans-splice leader acceptor site | |||
| SO_term | SO:0000706 | ||||
| Defined_by | Defined_by_sequence | yk1711f09.5 | Curator_confirmed | WBPerson1846 | |
| Inferred_automatically | make_missing_tsl_features.pl | ||||
| early_embryo_bundle_of_reads_supporting_SL1_X_5493723_5493724_+_wb170 | |||||
| late_embryo_20dC_4.5hrs_post-early_embryo_bundle_of_reads_supporting_SL1_X_5493723_5493724_+_wb170 | |||||
| mid-L2_20dC_14hrs_post-L1_bundle_of_reads_supporting_SL1_X_5493723_5493724_+_wb170 | |||||
| Defined_by_analysis | RNASeq.elegans.N2.WBls:0000027.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX001872 | 1 | |||
| RNASeq.elegans.N2.WBls:0000004.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX037197 | 1 | ||||
| RNASeq.elegans.N2.WBls:0000021.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX047446 | 1 | ||||
| RNASeq.elegans.CB4689.WBls:0000038.Male.WBbt:0007833.PRJNA33023.SRX047469 | 1 | ||||
| RNASeq.elegans.N2.WBls:0000027.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX047653 | 1 | ||||
| RNASeq.elegans.N2.WBls:0000027.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX145661 | 1 | ||||
| RNASeq.elegans.N2.WBls:0000027.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX151607 | 4 | ||||
| Associations | Associated_with_CDS | T23F2.1a | |||
| Associated_with_transcript | T23F2.1a.1 | ||||
| Remark | Defined by RNASeq data from RNASeq.elegans.N2.WBls:0000027.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX001872 with 1 reads | ||||
| Defined by RNASeq data from RNASeq.elegans.N2.WBls:0000004.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX037197 with 1 reads | |||||
| Defined by RNASeq data from RNASeq.elegans.N2.WBls:0000021.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX047446 with 1 reads | |||||
| Defined by RNASeq data from RNASeq.elegans.CB4689.WBls:0000038.Male.WBbt:0007833.PRJNA33023.SRX047469 with 1 reads | |||||
| Defined by RNASeq data from RNASeq.elegans.N2.WBls:0000027.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX047653 with 1 reads | |||||
| Defined by RNASeq data from RNASeq.elegans.N2.WBls:0000027.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX145661 with 1 reads | |||||
| Defined by RNASeq data from RNASeq.elegans.N2.WBls:0000027.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX151607 with 4 reads | |||||
| Method | SL1 |
