WormBase Tree Display for Feature: WBsf020250
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WBsf020250 | SMap | S_parent | Sequence | Y54G2A | |
---|---|---|---|---|---|
Sequence_details | Flanking_sequences | CTCACACACAACGAATTATTTTTTTCTGCAG | TAACATCTTCGACGAGTGCTGCTTTTTCTAC | ||
Mapping_target | Y54G2A | ||||
Origin | Species | Caenorhabditis elegans | |||
Visible | Description | SL1 trans-splice leader acceptor site | |||
SO_term | SO:0000706 | ||||
Defined_by | Defined_by_sequence | SW026-7_M0709 | Paper_evidence | WBPaper00006407 | |
Inferred_automatically | ace-TEC_RED.pl | ||||
Adult_spe-9_23dC_8days_post-L4_molt_bundle_of_reads_supporting_sl1_IV_3002680_3002681_-_wb170 | |||||
dauer_daf-2_25dC_91hrs_post-L1_bundle_of_reads_supporting_sl1_IV_3002680_3002681_-_wb170 | |||||
dauer_entry_daf-2_25dC_48hrs_post-L1_bundle_of_reads_supporting_sl1_IV_3002680_3002681_-_wb170 | |||||
Adult_spe-9_23dC_8days_post-L4_molt_bundle_of_reads_supporting_SL1_IV_3002679_3002680_-_wb170 | |||||
dauer_daf-2_25dC_91hrs_post-L1_bundle_of_reads_supporting_SL1_IV_3002679_3002680_-_wb170 | |||||
dauer_entry_daf-2_25dC_48hrs_post-L1_bundle_of_reads_supporting_SL1_IV_3002679_3002680_-_wb170 | |||||
embryo_him-8_20dC_post-L1_bundle_of_reads_supporting_SL1_IV_3002679_3002680_-_wb170 | |||||
late_embryo_20dC_4.5hrs_post-early_embryo_bundle_of_reads_supporting_SL1_IV_3002679_3002680_-_wb170 | |||||
lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_bundle_of_reads_supporting_SL1_IV_3002679_3002680_-_wb170 | |||||
mid-L1_20dC_4hrs_post-L1_bundle_of_reads_supporting_SL1_IV_3002679_3002680_-_wb170 | |||||
mid-L2_20dC_14hrs_post-L1_bundle_of_reads_supporting_SL1_IV_3002679_3002680_-_wb170 | |||||
mid-L3_20dC_25hrs_post-L1_bundle_of_reads_supporting_SL1_IV_3002679_3002680_-_wb170 | |||||
Defined_by_analysis | TEC-RED | ||||
RNASeq.elegans.N2.WBls:0000035.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX001875 | 3 | ||||
RNASeq.elegans.N2.WBls:0000021.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX004866 | 2 | ||||
RNASeq.elegans.BA671.WBls:0000041.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX008136 | 2 | ||||
RNASeq.elegans.CB1370.WBls:0000032.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX008138 | 1 | ||||
RNASeq.elegans.CB1370.WBls:0000031.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX008139 | 1 | ||||
RNASeq.elegans.CB1489.WBls:0000003.Male.WBbt:0007833.PRJNA33023.SRX011569 | 1 | ||||
RNASeq.elegans.N2.WBls:0000063.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX014007 | 1 | ||||
RNASeq.elegans.N2.WBls:0000063.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX014008 | 3 | ||||
RNASeq.elegans.N2.WBls:0000063.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX014009 | 1 | ||||
RNASeq.elegans.JK1107.WBls:0000038.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX014010 | 1 | ||||
RNASeq.elegans.N2.WBls:0000041.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX036969 | 2 | ||||
RNASeq.elegans.N2.WBls:0000041.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX036970 | 1 | ||||
RNASeq.elegans.N2.WBls:0000004.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX037186 | 1 | ||||
RNASeq.elegans.CB1489.WBls:0000003.Male.WBbt:0007833.PRJNA33023.SRX037198 | 3 | ||||
RNASeq.elegans.CB4689.WBls:0000038.Male.WBbt:0007833.PRJNA33023.SRX047469 | 2 | ||||
RNASeq.elegans.CB1370.WBls:0000031.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX047470 | 3 | ||||
RNASeq.elegans.N2.WBls:0000041.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX047635 | 1 | ||||
RNASeq.elegans.N2.WBls:0000027.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX047653 | 1 | ||||
RNASeq.elegans.MT10430.WBls:0000024.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX049744 | 1 | ||||
RNASeq.elegans.N2.WBls:0000024.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX139602 | 1 | ||||
RNASeq.elegans.N2.WBls:0000027.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX151607 | 6 | ||||
RNASeq.elegans.N2.WBls:0000041.Hermaphrodite.WBbt:0005175.PRJNA33023.SRX151618 | 1 | ||||
Remark | Defined by RNASeq data from RNASeq.elegans.N2.WBls:0000035.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX001875 with 3 reads | ||||
Defined by RNASeq data from RNASeq.elegans.N2.WBls:0000021.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX004866 with 2 reads | |||||
Defined by RNASeq data from RNASeq.elegans.BA671.WBls:0000041.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX008136 with 2 reads | |||||
Defined by RNASeq data from RNASeq.elegans.CB1370.WBls:0000032.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX008138 with 1 reads | |||||
Defined by RNASeq data from RNASeq.elegans.CB1370.WBls:0000031.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX008139 with 1 reads | |||||
Defined by RNASeq data from RNASeq.elegans.CB1489.WBls:0000003.Male.WBbt:0007833.PRJNA33023.SRX011569 with 1 reads | |||||
Defined by RNASeq data from RNASeq.elegans.N2.WBls:0000063.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX014007 with 1 reads | |||||
Defined by RNASeq data from RNASeq.elegans.N2.WBls:0000063.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX014008 with 3 reads | |||||
Defined by RNASeq data from RNASeq.elegans.N2.WBls:0000063.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX014009 with 1 reads | |||||
Defined by RNASeq data from RNASeq.elegans.JK1107.WBls:0000038.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX014010 with 1 reads | |||||
Defined by RNASeq data from RNASeq.elegans.N2.WBls:0000041.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX036969 with 2 reads | |||||
Defined by RNASeq data from RNASeq.elegans.N2.WBls:0000041.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX036970 with 1 reads | |||||
Defined by RNASeq data from RNASeq.elegans.N2.WBls:0000004.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX037186 with 1 reads | |||||
Defined by RNASeq data from RNASeq.elegans.CB1489.WBls:0000003.Male.WBbt:0007833.PRJNA33023.SRX037198 with 3 reads | |||||
Defined by RNASeq data from RNASeq.elegans.CB4689.WBls:0000038.Male.WBbt:0007833.PRJNA33023.SRX047469 with 2 reads | |||||
Defined by RNASeq data from RNASeq.elegans.CB1370.WBls:0000031.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX047470 with 3 reads | |||||
Defined by RNASeq data from RNASeq.elegans.N2.WBls:0000041.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX047635 with 1 reads | |||||
Defined by RNASeq data from RNASeq.elegans.N2.WBls:0000027.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX047653 with 1 reads | |||||
Defined by RNASeq data from RNASeq.elegans.MT10430.WBls:0000024.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX049744 with 1 reads | |||||
Defined by RNASeq data from RNASeq.elegans.N2.WBls:0000024.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX139602 with 1 reads | |||||
Defined by RNASeq data from RNASeq.elegans.N2.WBls:0000027.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX151607 with 6 reads | |||||
Defined by RNASeq data from RNASeq.elegans.N2.WBls:0000041.Hermaphrodite.WBbt:0005175.PRJNA33023.SRX151618 with 1 reads | |||||
Method | SL1 |