WormBase Tree Display for Feature: WBsf025079
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| WBsf025079 | SMap | S_parent | Sequence | F54D8 | ||
|---|---|---|---|---|---|---|
| Sequence_details | Flanking_sequences | GCGCAAGTGTAGTTTCAGAATTGTATAAAAAGTCG | AAAAAATTATTGCAAAACAAGAACAATTTGAAAAA | |||
| Mapping_target | F54D8 | |||||
| Source_location | 190 | CHROMOSOME_III | 5082948 | 5082949 | ||
| Origin | Species | Caenorhabditis elegans | ||||
| Visible | Description | polyA site | ||||
| SO_term | SO:0000553 | |||||
| Defined_by | Defined_by_sequence | yk100e6.5 | Inferred_automatically | find_missing_polya_feature_data.pl | ||
| mid-L1_20dC_4hrs_post-L1_bundle_of_reads_supporting_polyA_III_5082948_-_wb170 | ||||||
| mid-L3_20dC_25hrs_post-L1_bundle_of_reads_supporting_polyA_III_5082948_-_wb170 | ||||||
| Defined_by_paper | WBPaper00037808 | |||||
| WBPaper00037948 | ||||||
| Defined_by_analysis | RNASeq_Hillier.L1_larva | |||||
| RNASeq_Hillier.L3_larva | ||||||
| RNASeq_Fire.all_stages_ssRNALigSeq | ||||||
| Associations | Associated_with_transcript | F54D8.2.4 | ||||
| Remark | [110125 gw3] This polyA_site feature was defined by the Bartel paper. | |||||
| Bartel data confident_cleavagesite score: 247.0 | ||||||
| Method | polyA_site |
