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WormBase Tree Display for Feature: WBsf025133

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Name Class

WBsf025133SMapS_parentSequenceF54D8
Sequence_detailsFlanking_sequencesTTGTGTTGTTGAAGAAAATAAATTATTTTATTCTCATAACTTTTTTCAATCGAAGGATGTTTTCAGAGAA
Mapping_targetF54D8
Source_location190CHROMOSOME_III51084585108459
OriginSpeciesCaenorhabditis elegans
VisibleDescriptionpolyA site
SO_termSO:0000553
Defined_byDefined_by_sequenceyk433h12.5Inferred_automaticallyfind_missing_polya_feature_data.pl
make_missing_tsl_features.pl
yk515e3.5Inferred_automaticallyfind_missing_polya_feature_data.pl
make_missing_tsl_features.pl
early_embryo_bundle_of_reads_supporting_polyA_III_5108458_-_wb170
embryo_him-8_20dC_post-L1_bundle_of_reads_supporting_polyA_III_5108458_-_wb170
late_embryo_20dC_4.5hrs_post-early_embryo_bundle_of_reads_supporting_polyA_III_5108458_-_wb170
mid-L1_20dC_4hrs_post-L1_bundle_of_reads_supporting_polyA_III_5108458_-_wb170
Defined_by_paperWBPaper00037808
WBPaper00037948
Defined_by_analysisRNASeq_Hillier.early_embryo
RNASeq_Hillier.embryo_him-8
RNASeq_Hillier.late_embryo
RNASeq_Hillier.L1_larva
RNASeq_Fire.all_stages_ssRNALigSeq
Remark[110125 gw3] This polyA_site feature was defined by the Bartel paper.
Bartel data confident_cleavagesite score: 9439.0
MethodpolyA_site