WormBase Tree Display for Feature: WBsf175293
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| WBsf175293 | SMap | S_parent | Sequence | Y37D8A | ||
|---|---|---|---|---|---|---|
| Sequence_details | Flanking_sequences | ATAACGTTCGGAATAAATATTTTGTCGGGG | TTTCTTGGCGGGGTAAACCACCTCGTCCCA | |||
| Mapping_target | Y37D8A | |||||
| Source_location | 190 | CHROMOSOME_III | 12867469 | 12867470 | ||
| Origin | Species | Caenorhabditis elegans | ||||
| Visible | Description | polyA_site defined by RNASeq short reads (Hillier et al.) | ||||
| Defined_by | Defined_by_sequence | mid-L3_20dC_25hrs_post-L1_bundle_of_reads_supporting_polyA_III_12867469_-_wb170 | ||||
| mid-L4_20dC_36hrs_post-L1_bundle_of_reads_supporting_polyA_III_12867469_-_wb170 | ||||||
| Young_Adult_25dC_46hrs_post-L1_bundle_of_reads_supporting_polyA_III_12867469_-_wb170 | ||||||
| Defined_by_paper | WBPaper00037808 | |||||
| WBPaper00037948 | ||||||
| Defined_by_analysis | RNASeq_Hillier.Young_Adult | |||||
| RNASeq_Hillier.L4_larva | ||||||
| RNASeq_Hillier.L3_larva | ||||||
| RNASeq_Fire.all_stages_ssRNALigSeq | ||||||
| Remark | [110125 gw3] This polyA_site feature was defined by the Bartel paper. | |||||
| Bartel data confident_cleavagesite score: 41.0 | ||||||
| Method | polyA_site |
