WormBase Tree Display for Feature: WBsf922231
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WBsf922231 | SMap | S_parent | Sequence | OVOC_OM1b_7 |
---|---|---|---|---|
Sequence_details | Flanking_sequences | tcttggtgactcgtttgatttccttttttgtagcgttgttgtgttattaatttaatagctaag | agtgggacggaattacagtaatggtggctgcaccaaaggttaagaaacatgctgtaccgaagcggagcaaaaagttggagagtggaaagacaacgaagaagaagaagaagcaaacaataaaatataatctcgaatgtaaaaatcctgtcgaagatggtatcatgaatgtaaacgattttgtgagttttttgaattttcaaaacttgttagaaattggatttgtagaagggatgtcctgccggggtttgcctcatcttttctgatgttacagttcaaataaaagttctgtagcttttgggggatggagggaaattgaaataaccgtcttgcacatctcatttcagccctcaaatgcttcgatgagtt | |
Mapping_target | OVOC_OM1b_7 | |||
Origin | Species | Onchocerca volvulus | ||
Visible | Description | SL1 trans-splice leader acceptor site | ||
SO_term | SO:0000706 | |||
Defined_by | Defined_by_analysis | RNASeq.ovolvulus.O_volvulus_Cameroon_isolate.WBls:0000108.Unknown.WBbt:0007833.PRJEB2965.ERX200391 | 1 | |
RNASeq.ovolvulus.O_volvulus_Cameroon_isolate.WBls:0000108.Unknown.WBbt:0007833.PRJEB2965.ERX200392 | 1 | |||
RNASeq.ovolvulus.O_volvulus_Cameroon_isolate.WBls:0000110.Unknown.WBbt:0007833.PRJEB2965.ERX200396 | 2 | |||
Remark | Defined by RNASeq data (example read: ERR225731.34455112.+.SL1 - 18S75M) from RNASeq.ovolvulus.O_volvulus_Cameroon_isolate.WBls:0000108.Unknown.WBbt:0007833.PRJEB2965.ERX200391 with 1 reads | |||
Defined by RNASeq data (example read: ERR225732.25631581.+.SL1 - 18S75M) from RNASeq.ovolvulus.O_volvulus_Cameroon_isolate.WBls:0000108.Unknown.WBbt:0007833.PRJEB2965.ERX200392 with 1 reads | ||||
Defined by RNASeq data (example read: ERR225736.8510013.+.SL1 - 18S74M) from RNASeq.ovolvulus.O_volvulus_Cameroon_isolate.WBls:0000110.Unknown.WBbt:0007833.PRJEB2965.ERX200396 with 2 reads | ||||
Method | SL1 |