WormBase Tree Display for Feature: WBsf925132
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| WBsf925132 | SMap | S_parent | Sequence | OVOC_OM1b_209 |
|---|---|---|---|---|
| Sequence_details | Flanking_sequences | tcagtttcctaatagtttcattctttacag | gattttgcatcatcataaaatgactttata | |
| Mapping_target | OVOC_OM1b_209 | |||
| Origin | Species | Onchocerca volvulus | ||
| Visible | Description | SL1 trans-splice leader acceptor site | ||
| SO_term | SO:0000706 | |||
| Defined_by | Defined_by_analysis | RNASeq.ovolvulus.O_volvulus_Cameroon_isolate.WBls:0000104.Male.WBbt:0007833.PRJEB2965.ERX200394 | 2 | |
| RNASeq.ovolvulus.O_volvulus_Cameroon_isolate.WBls:0000107.Unknown.WBbt:0007833.PRJEB2965.ERX200395 | 10 | |||
| RNASeq.ovolvulus.O_volvulus_Cameroon_isolate.WBls:0000108.Unknown.WBbt:0007833.PRJEB2965.ERX200391 | 2 | |||
| RNASeq.ovolvulus.O_volvulus_Cameroon_isolate.WBls:0000108.Unknown.WBbt:0007833.PRJEB2965.ERX200392 | 13 | |||
| RNASeq.ovolvulus.O_volvulus_Cameroon_isolate.WBls:0000108.Unknown.WBbt:0007833.PRJEB2965.ERX200393 | 23 | |||
| RNASeq.ovolvulus.O_volvulus_Cameroon_isolate.WBls:0000110.Unknown.WBbt:0007833.PRJEB2965.ERX200396 | 15 | |||
| RNASeq.ovolvulus.O_volvulus_Cameroon_isolate.WBls:0000110.Unknown.WBbt:0007833.PRJEB2965.ERX200397 | 7 | |||
| Remark | Defined by RNASeq data (example read: ERR225734.1229552.+.SL1 - 91M) from RNASeq.ovolvulus.O_volvulus_Cameroon_isolate.WBls:0000104.Male.WBbt:0007833.PRJEB2965.ERX200394 with 2 reads | |||
| Defined by RNASeq data (example read: ERR225735.19261716.+.SL1 - 91M) from RNASeq.ovolvulus.O_volvulus_Cameroon_isolate.WBls:0000107.Unknown.WBbt:0007833.PRJEB2965.ERX200395 with 10 reads | ||||
| Defined by RNASeq data (example read: ERR225731.10579643.+.SL1 - 92M) from RNASeq.ovolvulus.O_volvulus_Cameroon_isolate.WBls:0000108.Unknown.WBbt:0007833.PRJEB2965.ERX200391 with 2 reads | ||||
| Defined by RNASeq data (example read: ERR225732.4985159.+.SL1 - 90M) from RNASeq.ovolvulus.O_volvulus_Cameroon_isolate.WBls:0000108.Unknown.WBbt:0007833.PRJEB2965.ERX200392 with 13 reads | ||||
| Defined by RNASeq data (example read: ERR225733.31638223.+.SL1 - 90M) from RNASeq.ovolvulus.O_volvulus_Cameroon_isolate.WBls:0000108.Unknown.WBbt:0007833.PRJEB2965.ERX200393 with 23 reads | ||||
| Defined by RNASeq data (example read: ERR225736.23736777.+.SL1 - 90M) from RNASeq.ovolvulus.O_volvulus_Cameroon_isolate.WBls:0000110.Unknown.WBbt:0007833.PRJEB2965.ERX200396 with 15 reads | ||||
| Defined by RNASeq data (example read: ERR225737.4879340.+.SL1 - 91M) from RNASeq.ovolvulus.O_volvulus_Cameroon_isolate.WBls:0000110.Unknown.WBbt:0007833.PRJEB2965.ERX200397 with 7 reads | ||||
| Method | SL1 |
