WormBase Tree Display for Feature: WBsf925250
expand all nodes | collapse all nodes | view schema
| WBsf925250 | SMap | S_parent | Sequence | OVOC_OM1b_209 |
|---|---|---|---|---|
| Sequence_details | Flanking_sequences | cttttccattttttactaatttaatttcag | gtaaacatgatttcactgtttttgattctc | |
| Mapping_target | OVOC_OM1b_209 | |||
| Origin | Species | Onchocerca volvulus | ||
| Visible | Description | SL1 trans-splice leader acceptor site | ||
| SO_term | SO:0000706 | |||
| Defined_by | Defined_by_analysis | RNASeq.ovolvulus.O_volvulus_Cameroon_isolate.WBls:0000107.Unknown.WBbt:0007833.PRJEB2965.ERX200395 | 3 | |
| RNASeq.ovolvulus.O_volvulus_Cameroon_isolate.WBls:0000108.Unknown.WBbt:0007833.PRJEB2965.ERX200391 | 4 | |||
| RNASeq.ovolvulus.O_volvulus_Cameroon_isolate.WBls:0000110.Unknown.WBbt:0007833.PRJEB2965.ERX200396 | 11 | |||
| RNASeq.ovolvulus.O_volvulus_Cameroon_isolate.WBls:0000110.Unknown.WBbt:0007833.PRJEB2965.ERX200397 | 4 | |||
| Remark | Defined by RNASeq data (example read: ERR225735.20362510.+.SL1 + 92M) from RNASeq.ovolvulus.O_volvulus_Cameroon_isolate.WBls:0000107.Unknown.WBbt:0007833.PRJEB2965.ERX200395 with 3 reads | |||
| Defined by RNASeq data (example read: ERR225731.24730448.+.SL1 + 91M) from RNASeq.ovolvulus.O_volvulus_Cameroon_isolate.WBls:0000108.Unknown.WBbt:0007833.PRJEB2965.ERX200391 with 4 reads | ||||
| Defined by RNASeq data (example read: ERR225736.18798594.+.SL1 + 92M) from RNASeq.ovolvulus.O_volvulus_Cameroon_isolate.WBls:0000110.Unknown.WBbt:0007833.PRJEB2965.ERX200396 with 11 reads | ||||
| Defined by RNASeq data (example read: ERR225737.25053953.+.SL1 + 92M) from RNASeq.ovolvulus.O_volvulus_Cameroon_isolate.WBls:0000110.Unknown.WBbt:0007833.PRJEB2965.ERX200397 with 4 reads | ||||
| Method | SL1 |
