WormBase Tree Display for Feature: WBsf925339
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WBsf925339 | SMap | S_parent | Sequence | OVOC_OM1b_209 |
---|---|---|---|---|
Sequence_details | Flanking_sequences | atttaccggataactttcatttcatttcag | ttttcactatgtcaacgatcttcgatgatc | |
Mapping_target | OVOC_OM1b_209 | |||
Origin | Species | Onchocerca volvulus | ||
Visible | Description | SL1 trans-splice leader acceptor site | ||
SO_term | SO:0000706 | |||
Defined_by | Defined_by_analysis | RNASeq.ovolvulus.O_volvulus_Cameroon_isolate.WBls:0000104.Male.WBbt:0007833.PRJEB2965.ERX200394 | 5 | |
RNASeq.ovolvulus.O_volvulus_Cameroon_isolate.WBls:0000107.Unknown.WBbt:0007833.PRJEB2965.ERX200395 | 7 | |||
RNASeq.ovolvulus.O_volvulus_Cameroon_isolate.WBls:0000108.Unknown.WBbt:0007833.PRJEB2965.ERX200391 | 8 | |||
RNASeq.ovolvulus.O_volvulus_Cameroon_isolate.WBls:0000108.Unknown.WBbt:0007833.PRJEB2965.ERX200392 | 6 | |||
RNASeq.ovolvulus.O_volvulus_Cameroon_isolate.WBls:0000108.Unknown.WBbt:0007833.PRJEB2965.ERX200393 | 7 | |||
RNASeq.ovolvulus.O_volvulus_Cameroon_isolate.WBls:0000110.Unknown.WBbt:0007833.PRJEB2965.ERX200396 | 8 | |||
RNASeq.ovolvulus.O_volvulus_Cameroon_isolate.WBls:0000110.Unknown.WBbt:0007833.PRJEB2965.ERX200397 | 2 | |||
Remark | Defined by RNASeq data (example read: ERR225734.4453953.+.SL1 + 92M) from RNASeq.ovolvulus.O_volvulus_Cameroon_isolate.WBls:0000104.Male.WBbt:0007833.PRJEB2965.ERX200394 with 5 reads | |||
Defined by RNASeq data (example read: ERR225735.25380337.+.SL1 + 90M) from RNASeq.ovolvulus.O_volvulus_Cameroon_isolate.WBls:0000107.Unknown.WBbt:0007833.PRJEB2965.ERX200395 with 7 reads | ||||
Defined by RNASeq data (example read: ERR225731.16932488.+.SL1 + 91M) from RNASeq.ovolvulus.O_volvulus_Cameroon_isolate.WBls:0000108.Unknown.WBbt:0007833.PRJEB2965.ERX200391 with 8 reads | ||||
Defined by RNASeq data (example read: ERR225732.9703070.+.SL1 + 92M) from RNASeq.ovolvulus.O_volvulus_Cameroon_isolate.WBls:0000108.Unknown.WBbt:0007833.PRJEB2965.ERX200392 with 6 reads | ||||
Defined by RNASeq data (example read: ERR225733.34721532.+.SL1 + 91M) from RNASeq.ovolvulus.O_volvulus_Cameroon_isolate.WBls:0000108.Unknown.WBbt:0007833.PRJEB2965.ERX200393 with 7 reads | ||||
Defined by RNASeq data (example read: ERR225736.14180081.+.SL1 + 91M) from RNASeq.ovolvulus.O_volvulus_Cameroon_isolate.WBls:0000110.Unknown.WBbt:0007833.PRJEB2965.ERX200396 with 8 reads | ||||
Defined by RNASeq data (example read: ERR225737.12510477.+.SL1 + 92M) from RNASeq.ovolvulus.O_volvulus_Cameroon_isolate.WBls:0000110.Unknown.WBbt:0007833.PRJEB2965.ERX200397 with 2 reads | ||||
Method | SL1 |