WormBase Tree Display for Feature: WBsf925728
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| WBsf925728 | SMap | S_parent | Sequence | OVOC_OM1b_7 |
|---|---|---|---|---|
| Sequence_details | Flanking_sequences | ttgcaagatatgcaaaatttcaactttcag | cagcattttcgtcgggaaatgtcatttgtg | |
| Mapping_target | OVOC_OM1b_7 | |||
| Origin | Species | Onchocerca volvulus | ||
| Visible | Description | SL1 trans-splice leader acceptor site | ||
| SO_term | SO:0000706 | |||
| Defined_by | Defined_by_analysis | RNASeq.ovolvulus.O_volvulus_Cameroon_isolate.WBls:0000104.Male.WBbt:0007833.PRJEB2965.ERX200394 | 8 | |
| RNASeq.ovolvulus.O_volvulus_Cameroon_isolate.WBls:0000107.Unknown.WBbt:0007833.PRJEB2965.ERX200395 | 3 | |||
| RNASeq.ovolvulus.O_volvulus_Cameroon_isolate.WBls:0000108.Unknown.WBbt:0007833.PRJEB2965.ERX200391 | 11 | |||
| RNASeq.ovolvulus.O_volvulus_Cameroon_isolate.WBls:0000108.Unknown.WBbt:0007833.PRJEB2965.ERX200392 | 23 | |||
| RNASeq.ovolvulus.O_volvulus_Cameroon_isolate.WBls:0000108.Unknown.WBbt:0007833.PRJEB2965.ERX200393 | 21 | |||
| RNASeq.ovolvulus.O_volvulus_Cameroon_isolate.WBls:0000110.Unknown.WBbt:0007833.PRJEB2965.ERX200396 | 17 | |||
| RNASeq.ovolvulus.O_volvulus_Cameroon_isolate.WBls:0000110.Unknown.WBbt:0007833.PRJEB2965.ERX200397 | 17 | |||
| Remark | Defined by RNASeq data (example read: ERR225734.12028218.+.SL1 + 91M) from RNASeq.ovolvulus.O_volvulus_Cameroon_isolate.WBls:0000104.Male.WBbt:0007833.PRJEB2965.ERX200394 with 8 reads | |||
| Defined by RNASeq data (example read: ERR225735.730132.+.SL1 + 91M) from RNASeq.ovolvulus.O_volvulus_Cameroon_isolate.WBls:0000107.Unknown.WBbt:0007833.PRJEB2965.ERX200395 with 3 reads | ||||
| Defined by RNASeq data (example read: ERR225731.14598347.+.SL1 + 94M) from RNASeq.ovolvulus.O_volvulus_Cameroon_isolate.WBls:0000108.Unknown.WBbt:0007833.PRJEB2965.ERX200391 with 11 reads | ||||
| Defined by RNASeq data (example read: ERR225732.32006835.+.SL1 + 91M) from RNASeq.ovolvulus.O_volvulus_Cameroon_isolate.WBls:0000108.Unknown.WBbt:0007833.PRJEB2965.ERX200392 with 23 reads | ||||
| Defined by RNASeq data (example read: ERR225733.34914954.+.SL1 + 91M) from RNASeq.ovolvulus.O_volvulus_Cameroon_isolate.WBls:0000108.Unknown.WBbt:0007833.PRJEB2965.ERX200393 with 21 reads | ||||
| Defined by RNASeq data (example read: ERR225736.15751644.+.SL1 + 92M) from RNASeq.ovolvulus.O_volvulus_Cameroon_isolate.WBls:0000110.Unknown.WBbt:0007833.PRJEB2965.ERX200396 with 17 reads | ||||
| Defined by RNASeq data (example read: ERR225737.22419054.+.SL1 + 91M) from RNASeq.ovolvulus.O_volvulus_Cameroon_isolate.WBls:0000110.Unknown.WBbt:0007833.PRJEB2965.ERX200397 with 17 reads | ||||
| Method | SL1 |
