WormBase Tree Display for Feature: WBsf925808
expand all nodes | collapse all nodes | view schema
WBsf925808 | SMap | S_parent | Sequence | OVOC_OM1b_7 |
---|---|---|---|---|
Sequence_details | Flanking_sequences | ccttcccggactatcttgtcggtaaatttatcagcagttccaaatgttacaaaaatgttgattttccctacaattaataatttcattactcgtttcagagtgggtatgaattctctggaaagtctgttttcatggttgatgttttttccttttgtaatgtattactgaattgctgtgattttttcgattatttcactacactgtgtacttattcatggaaattggattctggaagaatttagcataaatttgaatatcatcatatatcatattatgcatgaagtgtgctctgtatcaaaatatttgtgctctgtgagaatttgaaaaattaatcctaattcattgttgttaattttcag | cttgaagaaattttcgatgaagcattgcaagaaaatttatattttcgtcaacaagtgaatgaactgcaaaagcgtattatacagttggaagatgataaacaaacacggcaagaaaatgttgctctaagagaggaggcggagaaaatacgcaatgctgatatggagcgtttgagacgagaaaatgctattctgaatcgaaaacagaagcagaaagatggtagtaataatgattatataaatttgcttaaggagcaggtcagtttcgatttgtactttgtcaatgtttttttgggcctaaattttcaatttactatggttatacatttt | |
Mapping_target | OVOC_OM1b_7 | |||
Origin | Species | Onchocerca volvulus | ||
Visible | Description | SL1 trans-splice leader acceptor site | ||
SO_term | SO:0000706 | |||
Defined_by | Defined_by_analysis | RNASeq.ovolvulus.O_volvulus_Cameroon_isolate.WBls:0000108.Unknown.WBbt:0007833.PRJEB2965.ERX200392 | 1 | |
RNASeq.ovolvulus.O_volvulus_Cameroon_isolate.WBls:0000110.Unknown.WBbt:0007833.PRJEB2965.ERX200396 | 4 | |||
RNASeq.ovolvulus.O_volvulus_Cameroon_isolate.WBls:0000110.Unknown.WBbt:0007833.PRJEB2965.ERX200397 | 2 | |||
Remark | Defined by RNASeq data (example read: ERR225732.2708384.+.SL1 - 92M) from RNASeq.ovolvulus.O_volvulus_Cameroon_isolate.WBls:0000108.Unknown.WBbt:0007833.PRJEB2965.ERX200392 with 1 reads | |||
Defined by RNASeq data (example read: ERR225736.26460097.+.SL1 - 91M) from RNASeq.ovolvulus.O_volvulus_Cameroon_isolate.WBls:0000110.Unknown.WBbt:0007833.PRJEB2965.ERX200396 with 4 reads | ||||
Defined by RNASeq data (example read: ERR225737.13183890.+.SL1 - 91M) from RNASeq.ovolvulus.O_volvulus_Cameroon_isolate.WBls:0000110.Unknown.WBbt:0007833.PRJEB2965.ERX200397 with 2 reads | ||||
Method | SL1 |