WormBase Tree Display for Feature: WBsf928556
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| WBsf928556 | SMap | S_parent | Sequence | OVOC_OM2_79 |
|---|---|---|---|---|
| Sequence_details | Flanking_sequences | aagtaagctatttatagcggcgtttttcag | gtatcattcgagaattcagttacctgtaat | |
| Mapping_target | OVOC_OM2_79 | |||
| Origin | Species | Onchocerca volvulus | ||
| Visible | Description | SL1 trans-splice leader acceptor site | ||
| SO_term | SO:0000706 | |||
| Defined_by | Defined_by_analysis | RNASeq.ovolvulus.O_volvulus_Cameroon_isolate.WBls:0000104.Male.WBbt:0007833.PRJEB2965.ERX200394 | 3 | |
| RNASeq.ovolvulus.O_volvulus_Cameroon_isolate.WBls:0000107.Unknown.WBbt:0007833.PRJEB2965.ERX200395 | 4 | |||
| RNASeq.ovolvulus.O_volvulus_Cameroon_isolate.WBls:0000108.Unknown.WBbt:0007833.PRJEB2965.ERX200391 | 7 | |||
| RNASeq.ovolvulus.O_volvulus_Cameroon_isolate.WBls:0000108.Unknown.WBbt:0007833.PRJEB2965.ERX200392 | 8 | |||
| RNASeq.ovolvulus.O_volvulus_Cameroon_isolate.WBls:0000108.Unknown.WBbt:0007833.PRJEB2965.ERX200393 | 8 | |||
| RNASeq.ovolvulus.O_volvulus_Cameroon_isolate.WBls:0000110.Unknown.WBbt:0007833.PRJEB2965.ERX200396 | 5 | |||
| RNASeq.ovolvulus.O_volvulus_Cameroon_isolate.WBls:0000110.Unknown.WBbt:0007833.PRJEB2965.ERX200397 | 6 | |||
| Remark | Defined by RNASeq data (example read: ERR225734.11241603.+.SL1 - 34M351N58M) from RNASeq.ovolvulus.O_volvulus_Cameroon_isolate.WBls:0000104.Male.WBbt:0007833.PRJEB2965.ERX200394 with 3 reads | |||
| Defined by RNASeq data (example read: ERR225735.24689402.+.SL1 - 33M351N58M) from RNASeq.ovolvulus.O_volvulus_Cameroon_isolate.WBls:0000107.Unknown.WBbt:0007833.PRJEB2965.ERX200395 with 4 reads | ||||
| Defined by RNASeq data (example read: ERR225731.7237412.+.SL1 - 32M351N58M) from RNASeq.ovolvulus.O_volvulus_Cameroon_isolate.WBls:0000108.Unknown.WBbt:0007833.PRJEB2965.ERX200391 with 7 reads | ||||
| Defined by RNASeq data (example read: ERR225732.9790325.+.SL1 - 32M351N58M) from RNASeq.ovolvulus.O_volvulus_Cameroon_isolate.WBls:0000108.Unknown.WBbt:0007833.PRJEB2965.ERX200392 with 8 reads | ||||
| Defined by RNASeq data (example read: ERR225733.21963732.+.SL1 - 32M351N58M) from RNASeq.ovolvulus.O_volvulus_Cameroon_isolate.WBls:0000108.Unknown.WBbt:0007833.PRJEB2965.ERX200393 with 8 reads | ||||
| Defined by RNASeq data (example read: ERR225736.20116954.+.SL1 - 33M351N58M) from RNASeq.ovolvulus.O_volvulus_Cameroon_isolate.WBls:0000110.Unknown.WBbt:0007833.PRJEB2965.ERX200396 with 5 reads | ||||
| Defined by RNASeq data (example read: ERR225737.13832899.+.SL1 - 33M351N58M) from RNASeq.ovolvulus.O_volvulus_Cameroon_isolate.WBls:0000110.Unknown.WBbt:0007833.PRJEB2965.ERX200397 with 6 reads | ||||
| Method | SL1 |
