WormBase Tree Display for Feature: WBsf929072
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WBsf929072 | SMap | S_parent | Sequence | OVOC_OM2_79 |
---|---|---|---|---|
Sequence_details | Flanking_sequences | ttttttatcatgtaaactaaatttttgcag | ataacggtaatgaaattcgcaaatggaaat | |
Mapping_target | OVOC_OM2_79 | |||
Origin | Species | Onchocerca volvulus | ||
Visible | Description | SL1 trans-splice leader acceptor site | ||
SO_term | SO:0000706 | |||
Defined_by | Defined_by_analysis | RNASeq.ovolvulus.O_volvulus_Cameroon_isolate.WBls:0000107.Unknown.WBbt:0007833.PRJEB2965.ERX200395 | 3 | |
RNASeq.ovolvulus.O_volvulus_Cameroon_isolate.WBls:0000108.Unknown.WBbt:0007833.PRJEB2965.ERX200391 | 4 | |||
RNASeq.ovolvulus.O_volvulus_Cameroon_isolate.WBls:0000108.Unknown.WBbt:0007833.PRJEB2965.ERX200392 | 1 | |||
RNASeq.ovolvulus.O_volvulus_Cameroon_isolate.WBls:0000108.Unknown.WBbt:0007833.PRJEB2965.ERX200393 | 1 | |||
RNASeq.ovolvulus.O_volvulus_Cameroon_isolate.WBls:0000110.Unknown.WBbt:0007833.PRJEB2965.ERX200396 | 14 | |||
RNASeq.ovolvulus.O_volvulus_Cameroon_isolate.WBls:0000110.Unknown.WBbt:0007833.PRJEB2965.ERX200397 | 1 | |||
Remark | Defined by RNASeq data (example read: ERR225735.23284436.+.SL1 - 92M) from RNASeq.ovolvulus.O_volvulus_Cameroon_isolate.WBls:0000107.Unknown.WBbt:0007833.PRJEB2965.ERX200395 with 3 reads | |||
Defined by RNASeq data (example read: ERR225731.14772735.+.SL1 - 91M) from RNASeq.ovolvulus.O_volvulus_Cameroon_isolate.WBls:0000108.Unknown.WBbt:0007833.PRJEB2965.ERX200391 with 4 reads | ||||
Defined by RNASeq data (example read: ERR225732.20584418.+.SL1 - 91M) from RNASeq.ovolvulus.O_volvulus_Cameroon_isolate.WBls:0000108.Unknown.WBbt:0007833.PRJEB2965.ERX200392 with 1 reads | ||||
Defined by RNASeq data (example read: ERR225733.839990.+.SL1 - 92M) from RNASeq.ovolvulus.O_volvulus_Cameroon_isolate.WBls:0000108.Unknown.WBbt:0007833.PRJEB2965.ERX200393 with 1 reads | ||||
Defined by RNASeq data (example read: ERR225736.19568298.+.SL1 - 91M) from RNASeq.ovolvulus.O_volvulus_Cameroon_isolate.WBls:0000110.Unknown.WBbt:0007833.PRJEB2965.ERX200396 with 14 reads | ||||
Defined by RNASeq data (example read: ERR225737.23518156.+.SL1 - 93M) from RNASeq.ovolvulus.O_volvulus_Cameroon_isolate.WBls:0000110.Unknown.WBbt:0007833.PRJEB2965.ERX200397 with 1 reads | ||||
Method | SL1 |