WormBase Tree Display for Feature: WBsf933343
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| WBsf933343 | SMap | S_parent | Sequence | OVOC_OM2_15 |
|---|---|---|---|---|
| Sequence_details | Flanking_sequences | taagcattttttgcatgaagtacttttcag | tgttttatgagaaaagattcgatgttatgt | |
| Mapping_target | OVOC_OM2_15 | |||
| Origin | Species | Onchocerca volvulus | ||
| Visible | Description | SL1 trans-splice leader acceptor site | ||
| SO_term | SO:0000706 | |||
| Defined_by | Defined_by_analysis | RNASeq.ovolvulus.O_volvulus_Cameroon_isolate.WBls:0000104.Male.WBbt:0007833.PRJEB2965.ERX200394 | 6 | |
| RNASeq.ovolvulus.O_volvulus_Cameroon_isolate.WBls:0000107.Unknown.WBbt:0007833.PRJEB2965.ERX200395 | 1 | |||
| RNASeq.ovolvulus.O_volvulus_Cameroon_isolate.WBls:0000108.Unknown.WBbt:0007833.PRJEB2965.ERX200391 | 1 | |||
| RNASeq.ovolvulus.O_volvulus_Cameroon_isolate.WBls:0000108.Unknown.WBbt:0007833.PRJEB2965.ERX200392 | 4 | |||
| RNASeq.ovolvulus.O_volvulus_Cameroon_isolate.WBls:0000108.Unknown.WBbt:0007833.PRJEB2965.ERX200393 | 5 | |||
| RNASeq.ovolvulus.O_volvulus_Cameroon_isolate.WBls:0000110.Unknown.WBbt:0007833.PRJEB2965.ERX200396 | 13 | |||
| RNASeq.ovolvulus.O_volvulus_Cameroon_isolate.WBls:0000110.Unknown.WBbt:0007833.PRJEB2965.ERX200397 | 11 | |||
| Remark | Defined by RNASeq data (example read: ERR225734.5842659.+.SL1 + 92M) from RNASeq.ovolvulus.O_volvulus_Cameroon_isolate.WBls:0000104.Male.WBbt:0007833.PRJEB2965.ERX200394 with 6 reads | |||
| Defined by RNASeq data (example read: ERR225735.7988291.+.SL1 + 92M) from RNASeq.ovolvulus.O_volvulus_Cameroon_isolate.WBls:0000107.Unknown.WBbt:0007833.PRJEB2965.ERX200395 with 1 reads | ||||
| Defined by RNASeq data (example read: ERR225731.24853426.+.SL1 + 92M) from RNASeq.ovolvulus.O_volvulus_Cameroon_isolate.WBls:0000108.Unknown.WBbt:0007833.PRJEB2965.ERX200391 with 1 reads | ||||
| Defined by RNASeq data (example read: ERR225732.22870935.+.SL1 + 92M) from RNASeq.ovolvulus.O_volvulus_Cameroon_isolate.WBls:0000108.Unknown.WBbt:0007833.PRJEB2965.ERX200392 with 4 reads | ||||
| Defined by RNASeq data (example read: ERR225733.35558456.+.SL1 + 91M) from RNASeq.ovolvulus.O_volvulus_Cameroon_isolate.WBls:0000108.Unknown.WBbt:0007833.PRJEB2965.ERX200393 with 5 reads | ||||
| Defined by RNASeq data (example read: ERR225736.20563405.+.SL1 + 93M) from RNASeq.ovolvulus.O_volvulus_Cameroon_isolate.WBls:0000110.Unknown.WBbt:0007833.PRJEB2965.ERX200396 with 13 reads | ||||
| Defined by RNASeq data (example read: ERR225737.24711936.+.SL1 + 91M) from RNASeq.ovolvulus.O_volvulus_Cameroon_isolate.WBls:0000110.Unknown.WBbt:0007833.PRJEB2965.ERX200397 with 11 reads | ||||
| Method | SL1 |
