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WormBase Tree Display for Gene: WBGene00006868

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Name Class

WBGene00006868SMapS_parentSequenceM03A1
IdentityVersion1
NameCGC_namevab-1Person_evidenceWBPerson261
Sequence_nameM03A1.1
Molecular_nameM03A1.1
M03A1.1.1
CE25060
Other_nameCELE_M03A1.1Accession_evidenceNDBBX284602
Public_namevab-1
DB_infoDatabase (13)
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:43WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classvab
Reference_alleleWBVar00142901
AlleleWBVar00142887Inferred_automatically (12)
WBVar00144496Inferred_automaticallyFrom strain object: CZ5686
From strain object: CZ7112
From strain object: CZ793
From strain object: CZ910
WBVar00143429
WBVar00142973
WBVar00142974
WBVar00143031
WBVar00142880
WBVar02124990
WBVar00726702
WBVar00726703
WBVar02108821
WBVar00726704
WBVar01499702
WBVar00726705
WBVar02129815
WBVar00726706
WBVar02129816
WBVar00726707
WBVar02129817
WBVar02129818
WBVar00726708
WBVar00726709
WBVar00726710
WBVar00726711
WBVar00726712
WBVar00726713
WBVar00143543
WBVar00726714
WBVar00726715
WBVar00726716
WBVar00726717
WBVar00726718
WBVar00726719
WBVar01413402
WBVar00726720
WBVar01413404
WBVar00726721
WBVar01413405
WBVar00726722
WBVar01413406
WBVar00726723
WBVar00726724
WBVar01413408
WBVar00726725
WBVar01498435
WBVar00726726
WBVar00726727
WBVar00726728
WBVar00726729
WBVar00726730
WBVar00726731
WBVar00088139
WBVar00726732
WBVar00726733
WBVar01559419
WBVar01559420
WBVar01492739
WBVar00726734
WBVar01559421
WBVar00726735
WBVar01492740
WBVar00726736
WBVar01559422
WBVar01719575
WBVar00726737
WBVar01559423
WBVar01719576
WBVar02109776
WBVar01559424
WBVar00726738
WBVar01719577
WBVar01993939
WBVar01719578
WBVar00143715
WBVar01559425
WBVar00726739
WBVar01559426
WBVar00726740
WBVar01248451
WBVar00726741
WBVar01559427
WBVar01559428
WBVar00726742
WBVar01559429
WBVar02055654
WBVar00726743
WBVar01916681
WBVar01934598
WBVar00726744
WBVar00726745
WBVar01934599
WBVar01916682
WBVar00142901
WBVar00726746
WBVar01400064
WBVar01393568
WBVar00726747
WBVar00726748
WBVar01393569
WBVar02108130
WBVar00726749
WBVar00726750
WBVar01248462
WBVar00726751
WBVar02017868
WBVar00550253
WBVar00726752
WBVar01371900
WBVar00550254
WBVar01305825
WBVar00726753
WBVar01371911
WBVar00726754
WBVar01305826
WBVar00550255
WBVar01371922
WBVar00726755
WBVar00550256
WBVar00726756
WBVar01305832
WBVar00550258
WBVar01305833
WBVar00726757
WBVar01371934
WBVar00550260
WBVar01603719
WBVar01305834
WBVar00726758
WBVar00550264
WBVar01248474
WBVar00550265
WBVar00726759
WBVar01305836
WBVar01603720
WBVar00260074
WBVar01305847
WBVar01603721
WBVar01371945
WBVar00550266
WBVar00726760
WBVar01371956
WBVar01305848
WBVar01603722
WBVar00726761
WBVar00550267
WBVar00550268
WBVar00726762
WBVar01305849
WBVar01603723
WBVar00550269
WBVar01305853
WBVar00726763
WBVar01603724
WBVar00726764
WBVar01603725
WBVar01371967
WBVar00550274
WBVar01305854
WBVar00726765
WBVar01603726
WBVar01305855
WBVar00726766
WBVar01603727
WBVar01239356
WBVar01305856
WBVar00726767
WBVar01371978
WBVar01305857
WBVar00726768
WBVar01305862
WBVar01305865
WBVar00726769
WBVar01371989
WBVar01248485
WBVar01372000
WBVar00364328
WBVar01305880
WBVar00726770
WBVar00726771
WBVar02002646
WBVar00364329
WBVar01372011
WBVar00364330
WBVar00092905
WBVar00726772
WBVar00364331
WBVar00726773
WBVar00726774
WBVar01404978
WBVar00364332
WBVar02106498
WBVar02029198
WBVar00726775
WBVar02029199
WBVar00364333
WBVar01248496
WBVar02029200
WBVar00726776
WBVar00364334
WBVar01792107
WBVar00726777
WBVar02089205
WBVar02029201
WBVar00364335
WBVar00364336
WBVar00726778
WBVar00726779
WBVar00364337
WBVar01248507
WBVar00364338
WBVar00726780
WBVar00726781
WBVar00364339
WBVar00726782
WBVar00364340
WBVar00726783
WBVar00364341
WBVar00364342
WBVar00726784
WBVar00364343
WBVar00726785
WBVar00726786
WBVar00364344
WBVar00364345
WBVar01248518
WBVar00726787
WBVar00726788
WBVar00364346
WBVar00726789
WBVar00364347
WBVar00364348
WBVar00171625
WBVar00726790
WBVar00364349
WBVar00726791
WBVar00222916
WBVar00171626
WBVar00364350
WBVar00726792
WBVar00222917
WBVar00171627
WBVar01248529
WBVar00726793
WBVar00364351
WBVar00222918
WBVar00171628
WBVar00171629
WBVar00222919
WBVar00726794
WBVar00364352
WBVar00364353
WBVar00171630
WBVar00726795
WBVar00222920
WBVar01248540
WBVar00171631
WBVar00726796
WBVar00364354
WBVar00222921
WBVar00314483
WBVar01248551
WBVar00171632
WBVar00726797
WBVar00222922
WBVar00364355
WBVar00171633
WBVar00222923
WBVar00364356
WBVar00726798
WBVar00726799
WBVar00364357
WBVar00171634
WBVar00171635
WBVar00364358
WBVar00726800
WBVar00726801
WBVar00364359
WBVar00171636
WBVar00726802
WBVar01943360
WBVar00364360
WBVar00171637
WBVar00171638
WBVar00364361
WBVar00726803
WBVar00726804
WBVar00364362
WBVar00171639
WBVar01248562
WBVar00364363
WBVar01895039
WBVar00726805
WBVar00171640
WBVar02087393
WBVar00364364
WBVar00171641
WBVar02087394
WBVar00726806
WBVar01437531
WBVar00171643
WBVar00364365
WBVar02087395
WBVar01437532
WBVar00726807
WBVar00726808
WBVar00364366
WBVar01437533
WBVar00171644
WBVar00726809
WBVar01437534
WBVar00364367
WBVar00171645
WBVar00171646
WBVar00726810
WBVar00364368
WBVar01437538
WBVar00171647
WBVar01949020
WBVar01437539
WBVar00726811
WBVar01248573
WBVar00171648
WBVar01949021
WBVar01437540
WBVar00726812
WBVar00726813
WBVar01949022
WBVar00171649
WBVar01437541
WBVar00726814
WBVar01949023
WBVar01437542
WBVar00171650
WBVar01949024
WBVar01836110
WBVar00171651
WBVar01437543
WBVar00726815
WBVar01949025
WBVar01437544
WBVar00726816
WBVar01949026
WBVar00726817
WBVar01949027
WBVar00726818
WBVar00726819
WBVar01494481
WBVar00726820
WBVar02033165
WBVar00726821
WBVar00726822
WBVar02033166
WBVar01959943
WBVar00726823
WBVar00726824
WBVar01959946
WBVar01959947
WBVar01959949
WBVar01959953
WBVar01823140
WBVar01959955
WBVar00276994
WBVar01959960
WBVar01959962
WBVar01959963
WBVar01626490
WBVar02076345
WBVar01783113
WBVar01783114
WBVar01783115
WBVar00103630
WBVar01505000
WBVar00103631
WBVar01477404
WBVar02124985
WBVar02068148
WBVar01477405
WBVar02124986
WBVar01477406
WBVar02124987
WBVar01477407
WBVar02124988
WBVar01371231
WBVar01477408
WBVar01495072
WBVar01371232
WBVar02124989
WBVar02124991
WBVar00260915
WBVar01817642
WBVar00726684
WBVar00726685
WBVar00726686
WBVar01576916
WBVar00726687
WBVar02096660
WBVar00726688
WBVar01576917
WBVar01576918
WBVar00726689
WBVar00726690
WBVar01982406
WBVar01576919
WBVar00726691
WBVar01576920
WBVar00726692
WBVar01576921
WBVar00726693
WBVar01576922
WBVar00726694
WBVar00726695
WBVar00726696
WBVar00726697
WBVar00726698
WBVar00726699
WBVar00143415
WBVar00726700
WBVar00726701
Legacy_informatione2 : notched head variable dystrophy of ventral cephalic region especially in L1; penetrance < 70%. ES3/0 ME3. NA8 (e1063 : penetrance 35%; e2027spo : penetrance > 90%).
See also e2, e116, e118, e200, e699, e721, e1063, e2027
[C.elegansII] e2 : notched head, variable dystrophy of ventral cephalic region, especially in L1; penetrance < 70%. ES3/0 ME3. OA>10: e1063 (penetrance 35%), e2027spo (penetrance > 90%), e699 etc. [Brenner 1974; Lewis and Hodgkin 1979; CB; CZ]
Strain (24)
RNASeq_FPKM (74)
GO_annotation (38)
Ortholog (113)
Paralog (69)
Structured_descriptionConcise_descriptionvab-1 encodes an ephrin receptor; during development, vab-1 activity is required for neural and epithelial morphogenesis as well as for proper axon targeting and neuronal cell migration; in addition, VAB-1 functions as a major sperm protein receptor in a sperm-sensing control mechanism that regulates oocyte meiotic maturation; VAB-1::GFP reporters are expressed in neuronal cells and in oocytes and sheath cells of the proximal gonad.Paper_evidenceWBPaper00003020
WBPaper00003843
WBPaper00005670
WBPaper00027013
Curator_confirmedWBPerson1843
Date_last_updated28 Feb 2007 00:00:00
Automated_descriptionEnables ephrin receptor activity and protein domain specific binding activity. Involved in several processes, including cell development; embryonic morphogenesis; and regulation of axon guidance. Located in axon and plasma membrane. Expressed in several structures, including hypodermal cell; neuroblasts; neurons; oocyte; and somatic nervous system. Human ortholog(s) of this gene implicated in several diseases, including Alzheimer's disease; aortic dissection; cataract 6 multiple types; and gastrointestinal system cancer (multiple). Is an ortholog of several human genes including EPHB1 (EPH receptor B1); EPHB2 (EPH receptor B2); and EPHB3 (EPH receptor B3).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Disease_infoPotential_model (14)
Molecular_infoCorresponding_CDSM03A1.1
Corresponding_CDS_historyM03A1.1b:wp274
Corresponding_transcriptM03A1.1.1
Other_sequence (11)
Associated_feature (54)
Experimental_infoRNAi_result (27)
Expr_pattern (16)
Drives_constructWBCnstr00000707
WBCnstr00006419
WBCnstr00009616
WBCnstr00018076
WBCnstr00034120
WBCnstr00042438
Construct_product (15)
AntibodyWBAntibody00000876
WBAntibody00001049
WBAntibody00001576
WBAntibody00002037
WBAntibody00002313
Microarray_results (28)
Expression_clusterWBPaper00030922:glycosylated_protein
WBPaper00033065:cyc-1(RNAi)_downregulated
WBPaper00035269:cde-1_regulated
WBPaper00037950:A-class-motor-neurons_L1-larva_expressed
WBPaper00037950:A-class-motor-neurons_L2-larva_expressed
WBPaper00037950:CEP-sheath-cells_Day1-adult_expressed
WBPaper00037950:GABAergic-motor-neurons_L1-larva_expressed
WBPaper00037950:GABAergic-motor-neurons_L2-larva_expressed
WBPaper00037950:hypodermis_L3-L4-larva_expressed
WBPaper00037950:PVD-OLL-neurons_L3-L4-larva_expressed
WBPaper00044426:rotenone_24h_downregulated
WBPaper00044656:tatn-1(qd182)_downregulated
WBPaper00044736:flat_dev_expression
WBPaper00044760:germline_specific
WBPaper00044786:emr-1(RNAi);lem-2(tm1582)_downregulated
WBPaper00045420:fertilization_downregulated_transcript
WBPaper00045521:Oogenic
WBPaper00045729:gld-2(RNAi)_downregulated
WBPaper00048923:Aging_regulated
WBPaper00048988:neuron_expressed
WBPaper00049545:cco-1(RNAi)_upregulated
WBPaper00049545:jmjd-3.1(+)_upregulated
WBPaper00049545:rgef-1p-jmjd-1.2(+)_upregulated
WBPaper00049626:UNC-75_target
WBPaper00049942:hsf-1(RNAi)_upregulated
WBPaper00050015:ifg-1(RNAi)_upregulated
WBPaper00050234:lin-28(RNAi)_upregulated
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050488:mir-34(OverExpression)_vs_N2_regulated_adult_20C
WBPaper00050488:N2_vs_mir-34(OverExpression)_regulated_adult_25C
WBPaper00050496:unc-39(hp701)_regulated
WBPaper00050712:RC301_vs_DA650_4h-PA_upregulated
WBPaper00050726:OsmoticStress_regulated_Food
WBPaper00050990:hypodermis_expressed
WBPaper00050990:NMDA-neuron_expressed
WBPaper00050990:seam_expressed
WBPaper00051039:germline_enriched
WBPaper00052884:emb-4(hc60)_downregulated
WBPaper00053184:sma-2(rax5)_downregulated
WBPaper00053184:sma-4(rax3)_downregulated
WBPaper00053295:lin-22(icb38)_upregulated
WBPaper00053599:female_vs_male_upregulated
WBPaper00053599:oocyte_vs_mitosis_downregulated
WBPaper00053810:nuo-6(qm200)_downregulated
WBPaper00053814:15C_downregulated_OP50
WBPaper00055226:ADR-2_target_N2
WBPaper00055334:DLC-1_interacting
WBPaper00055354:eat-2(ad1116)_upregulated
WBPaper00055354:Rapamycin-Allantoin_upregulated
WBPaper00055354:Rapamycin-Metformin_upregulated
WBPaper00055354:Rapamycin-Psora-Allantoin_upregulated
WBPaper00055354:Rapamycin-Psora_upregulated
WBPaper00055354:Rapamycin-Rifampicin-Allantoin_upregulated
WBPaper00055354:Rapamycin-Rifampicin-Psora_upregulated
WBPaper00055354:Rapamycin-Rifampicin_upregulated
WBPaper00055354:Rapamycin_upregulated
WBPaper00055354:Rifampicin-Psora_upregulated
WBPaper00055626:pry-1(mu38)_upregulated
WBPaper00055648:germline_expressed
WBPaper00055971:nhl-2(ok818)_25C_upregulated
WBPaper00056284:ints-5(RNAi)_downregulated
WBPaper00056826:SGP_biased
WBPaper00057154:HeatShock_downregulated_mRNA
WBPaper00057154:HeatShock_upregulated_miRNA-target
WBPaper00057288:iff-1(RNAi)_upregulated_transcript
WBPaper00058598:sin-3(tm1276)_downregulated
WBPaper00059471:EGL-43_interacting
WBPaper00059763:neuron_expressed
WBPaper00060014:set-2(tm1630)_downregulated
WBPaper00060100:SiNP_upregulated_mRNA
WBPaper00060683:hlh-11(ko1)_downregulated
WBPaper00060811:L1_vs_adult_upregulated_neural
WBPaper00060909:atfs-1(cmh15)_upregulated
WBPaper00061007:HB101_downregulated
WBPaper00061007:S.aquatilis_downregulated
WBPaper00061203:sin-3(tm1276)_upregulated
WBPaper00061203:spr-1(ok2144)_upregulated
WBPaper00061340:ABarpaaa_lineage
WBPaper00061340:ALM_BDU
WBPaper00061340:AVH
WBPaper00061340:AVJ
WBPaper00061340:CAN
WBPaper00061340:CEPsh
WBPaper00061340:DVC
WBPaper00061340:FLP
WBPaper00061340:F_U
WBPaper00061340:g2_parent
WBPaper00061340:Glia
WBPaper00061340:Intestinal_and_rectal_muscle
WBPaper00061340:K_Kprime
WBPaper00061340:mu_sph
WBPaper00061340:Neuroblast_HSN_PHB
WBPaper00061340:Neuroblast_PVC_LUA
WBPaper00061340:Neuroblast_URX_CEPDx
WBPaper00061340:Parents_of_U_F_B_DVA
WBPaper00061340:Parent_of_PVP_and_rect_V
WBPaper00061340:PLM_ALN_grandparent
WBPaper00061340:PLM_ALN_great_grandparent
WBPaper00061340:rect_D
WBPaper00061527:mbk-2_1585-tol-1_22538
WBPaper00061527:npp-8_4368-E01B7.1_7741
WBPaper00061651:MC_enriched
WBPaper00061651:PDA_enriched
WBPaper00061651:VA12_enriched
WBPaper00064088:Day-1-adult_vs_L4_downregulated_daf-16(mu86);glp-1(e2141)
WBPaper00064088:Day-1-adult_vs_L4_downregulated_fem-3(q20)
WBPaper00064088:Day-1-adult_vs_L4_downregulated_glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_downregulated_daf-16(mu86);glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_downregulated_glp-1(e2141)
WBPaper00064229:B.thuringiensis-Cry5Ba_downregulated
WBPaper00064502:spe-44(fx110)_upregulated
WBPaper00064716:paraquat_upregulated
WBPaper00065096:25C_vs_20C_upregulated
WBPaper00065096:Day10_vs_Day1_upregulated
WBPaper00065835:Day11_vs_Day1_upregulated
WBPaper00065841:44_0
WBPaper00065841:65_0
WBPaper00065841:108_0
WBPaper00065841:118_0
WBPaper00065841:119_0
WBPaper00065841:136_0
WBPaper00065993:glp-1(e2141)_downregulated
WBPaper00066110:Doxorubicin_downregulated_diploid
WBPaper00066110:tetraploid_vs_diploid_downregulated
WBPaper00066146:germline-inx-14(RNAi)_downregulated_PA14
cgc4386_cluster_6_4
cgc4489_group_2
WBPaper00024671:AFD_AWB_vs_unsorted_upregulated
WBPaper00025141:unc-4::GFP_Expressed_Genes
WBPaper00026929:Resveratrol_regulated_daf-16
WBPaper00026929:sir-2.1_overexpression_regulated
WBPaper00027111:rrf-2(ok210)_upregulated
WBPaper00031003:hlh_1_enriched
WBPaper00031252:AIN-1_IP_enriched
WBPaper00031252:AIN-2_IP_enriched
WBPaper00031832:slr-2_regulated
WBPaper00034661:AgNPs_downregulated
WBPaper00034739:N2lessDR1350
WBPaper00035084:embryo_enriched_AIN-2_IP
WBPaper00035873:dpy-9_regulated
WBPaper00035873:dpy-10_regulated
WBPaper00035905:FBF-1_Associated
WBPaper00040210:Chlorpyrifos_24C_regulated
WBPaper00040858:eQTL_regulated_juvenile
WBPaper00040963:Q100_down
WBPaper00040963:Q200_down
WBPaper00040963:TA300_down
WBPaper00041002:HQ_3d_2.0mM_Down
WBPaper00041606:CE_X.nematophila_regulated
WBPaper00041939:UVC-EtBr-exposed_vs_EtBr-exposed_3h
WBPaper00045263:0.1mM-paraquat_upregulated
WBPaper00048989:N2_rapamycin_downregulated
[cgc5767]:expression_class_E
[cgc5767]:expression_class_E_pi(23_min)
[cgc5767]:expression_class_SE
[cgc5767]:expression_class_SE_pi(23_min)
[cgc6390]:Cluster_E
[cgc6390]:oogenesis-enriched
Interaction (248)
Anatomy_functionWBbtf0217
WBbtf0220
WBProcessWBbiopr:00000001
WBbiopr:00000068
WBbiopr:00000120
Map_infoMapIIPosition-3.85469Error0.013028
Well_ordered
PositiveInside_rearrmDf14
mDf15
Positive_cloneM03A1Person_evidenceWBPerson105
Inferred_automaticallyFrom sequence, transcript, pseudogene data
Mapping_data2_point266
Multi_point48
881
882
1880
4031
4032
Pos_neg_data (12)
Reference (154)
MethodGene