WormBase Tree Display for Gene: WBGene00020465

WBGene00020465 SMap: S_parent: Sequence: CHROMOSOME_IV
  Identity: Version: 1
    Name: Sequence_name: T12E12.6
      Molecular_name: T12E12.6
        T12E12.6.1
        CE37272
      Other_name: CELE_T12E12.6 Accession_evidence: NDB BX284604
      Public_name: T12E12.6
    DB_info: Database: AceView gene 4G330
        WormQTL gene WBGene00020465
        WormFlux gene WBGene00020465
        NDB locus_tag CELE_T12E12.6
        Panther gene CAEEL|WormBase=WBGene00020465|UniProtKB=A5A631
          family PTHR11533
        NCBI gene 188454
        RefSeq protein NM_068430.4
        TREEFAM TREEFAM_ID TF315550
        TrEMBL UniProtAcc A5A631
        UniProt_GCRP UniProtAcc A5A631
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:03 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele: WBVar00094587 Inferred_automatically: From strain object: RB2606
      WBVar01481874
      WBVar01481875
      WBVar01481876
      WBVar01481877
      WBVar01499365
      WBVar01786365
      WBVar02133925
      WBVar02133926
      WBVar00425394
      WBVar00425395
      WBVar00425396
      WBVar00425397
      WBVar00425398
      WBVar00425399
      WBVar01794702
      WBVar00425400
      WBVar00425401
      WBVar00425402
      WBVar00425403
      WBVar02117342
      WBVar02147917
      WBVar00911125
      WBVar01499395
      WBVar00911126
      WBVar01499396
      WBVar00911127
      WBVar02124896
      WBVar00911128
      WBVar00911129
      WBVar00911130
      WBVar00911131
      WBVar00911132
      WBVar00911133
      WBVar00911134
      WBVar00911135
      WBVar00911136
      WBVar00911137
      WBVar00911138
      WBVar00911139
      WBVar00911140
      WBVar02096199
      WBVar00911141
      WBVar02096200
      WBVar00911142
      WBVar00911143
      WBVar00911144
      WBVar02094364
      WBVar00911145
      WBVar02094365
      WBVar00261388
      WBVar00911146
      WBVar00911147
      WBVar00911148
      WBVar00261391
      WBVar00911149
      WBVar00911150
      WBVar00911151
      WBVar00261394
      WBVar00911152
      WBVar00911153
      WBVar00911154
      WBVar00911155
      WBVar00911156
      WBVar01499242
      WBVar00911157
      WBVar00911158
      WBVar00911159
      WBVar00911160
      WBVar00911161
      WBVar00911162
      WBVar02051612
      WBVar02121621
      WBVar02003858
      WBVar01569683
      WBVar01569684
      WBVar01499633
      WBVar01649926
      WBVar01515901
      WBVar01772246
      WBVar01966299
      WBVar01452501
      WBVar01966300
      WBVar01452502
      WBVar01452503
      WBVar02068714
      WBVar01500245
    Strain: WBStrain00033281
    RNASeq_FPKM (74)
    GO_annotation (18)
    Ortholog (28)
    Paralog (13)
    Structured_description: Automated_description: Predicted to enable metalloaminopeptidase activity; peptide binding activity; and zinc ion binding activity. Involved in embryo development; regulation of egg-laying behavior; and regulation of meiotic cell cycle process involved in oocyte maturation. Predicted to be located in cytoplasm. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: T12E12.6
    Corresponding_CDS_history: T12E12.6:wp129
    Corresponding_transcript: T12E12.6.1
    Other_sequence: Dviv_isotig12151
      Dviv_isotig12149
    Associated_feature: WBsf651805
      WBsf230096
  Experimental_info: RNAi_result: WBRNAi00053218 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1022002
      Expr1156804
      Expr2006134
      Expr2024349
    Drives_construct: WBCnstr00025118
    Construct_product: WBCnstr00025118
    Microarray_results (20)
    Expression_cluster: WBPaper00037950:A-class-motor-neurons_L1-larva_expressed
      WBPaper00037950:AVE-neuron_L1-larva_expressed
      WBPaper00037950:BAG-neuron_blastula-embryo_expressed
      WBPaper00037950:bodywall-muscle_L1-larva_expressed
      WBPaper00037950:CEP-sheath-cells_Day1-adult_expressed
      WBPaper00037950:GABAergic-motor-neurons_L1-larva_expressed
      WBPaper00037950:germline-precursors_blastula-embryo_expressed
      WBPaper00037950:intestine_L1-larva_expressed
      WBPaper00037950:pharyngeal-muscle_L1-larva_expressed
      WBPaper00038438:D.coniospora_12hr_downregulated_RNAseq
      WBPaper00040221:DAF-12_target_ALF4
      WBPaper00040560:hpl-2_L3_upregulated
      WBPaper00042215:wdr-23(tm1817)_upregulated
      WBPaper00042477:rsr-2(RNAi)_upregulated_TilingArray
      WBPaper00044260:1-methylnicotinamide_upregulated
      WBPaper00044260:nicotinc-acid_upregulated
      WBPaper00044736:oscillating_dev_expression
      WBPaper00044786:emr-1(RNAi);lem-2(tm1582)_upregulated
      WBPaper00045316:prg-1_upregulated_L4
      WBPaper00045390:tunicamycin_upregulated
      WBPaper00045390:ubc-9(RNAi)_upregulated
      WBPaper00045774:clk-1_downregulated
      WBPaper00045934:wrn-1(gk99)_upregulated
      WBPaper00048690:gonad-hermaphrodite-biased
      WBPaper00048988:daf-2(e1370)_downregulated_neuron
      WBPaper00048988:neuron_expressed
      WBPaper00049498:npr-1(ur89)_regulated_1
      WBPaper00049545:jmjd-3.1(+)_upregulated
      WBPaper00050488:20C_vs_25C_regulated_mir-34(OverExpression)_adult
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_adult_20C
      WBPaper00050488:mir-34(OverExpression)_vs_N2_regulated_adult_20C
      WBPaper00050726:OsmoticStress_regulated_Food
      WBPaper00050726:OsmoticStress_regulated_NoFood
      WBPaper00050801:DAF-12_dauer_regulome
      WBPaper00050801:DAF-16_dauer_regulome
      WBPaper00050801:DPY-21_dauer_regulome
      WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day2-adult
      WBPaper00051404:alg-1(gk214)_downregulated
      WBPaper00051404:alg-2(ok304)_downregulated
      WBPaper00053020:sid-3(ok973)_upregulated
      WBPaper00053388:dauer_regulated_Cluster5
      WBPaper00053771:down_by_skn-1(RNAi)_at_24h-NaCl
      WBPaper00053771:down_by_skn-1(RNAi)_at_dpy-7(e88)
      WBPaper00054410:set-9(rw5)_downregulated
      WBPaper00054410:set-26(tm2467)_downregulated
      WBPaper00054493:hpl-2(tm1489)_upregulated
      WBPaper00055013:hmg-3(bar24)_downregulated
      WBPaper00055013:spt-16(RNAi)_downregulated
      WBPaper00055862:antimycin_damt-1(gk961032)_regulated
      WBPaper00055941:atfs-1(et15)_upregulated
      WBPaper00055941:nuo-6(qm200);atfs-1(gk3094)_upregulated
      WBPaper00056169:rrf-3(pk1426)_downregulated_L4
      WBPaper00056169:rrf-3(pk1426)_upregulated_L1
      WBPaper00056290:hsp-6(mg585)_upregulated
      WBPaper00056330:glycine_downregulated
      WBPaper00056471:aak-1(tm1944);aak-2(ok524)_upregulated
      WBPaper00056617:adr-1_upregulated_L4_transcript
      WBPaper00056617:adr-2_upregulated_L4_transcript
      WBPaper00057068:numr-1(RNAi)_downregulated
      WBPaper00058598:mex-1(or286)_upregulated
      WBPaper00058598:mex-3(eu149)_upregulated
      WBPaper00058598:sin-3(tm1276)_downregulated
      WBPaper00058598:spn-4(tm291)_upregulated
      WBPaper00058927:high-redox-state_upregulated
      WBPaper00058948:npr-8(ok1439)_downregulated_PA14
      WBPaper00058969:RIS_depleted
      WBPaper00059117:B.subtilis_upregulated
      WBPaper00059328:mrps-5(RNAi)_downregulated_mRNA
      WBPaper00060014:set-2(tm1630)_downregulated
      WBPaper00060084:cco-1(RNAi)_downregulated_N2
      WBPaper00060434:pH4.33_vs_pH6.33_downrgulated
      WBPaper00060909:atfs-1(cmh15)_downregulated
      WBPaper00060909:atfs-1(et18)_downregulated
      WBPaper00060911:prx-5(RNAi)_upregulated_mRNA
      WBPaper00061203:sin-3(tm1276)_upregulated
      WBPaper00061340:Anterior_arcade_cell
      WBPaper00061340:ant_arc_V
      WBPaper00061340:mc1
      WBPaper00061340:pm1_pm2
      WBPaper00061340:pm7
      WBPaper00061340:pm8
      WBPaper00061390:N2_ascarosides_downregulated
      WBPaper00061424:Diet_MYb120_upregulated
      WBPaper00061439:unc-30(ok613)_upregulated
      WBPaper00061439:unc-30(ok613)_upregulated_P.aeruginosa-infection
      WBPaper00061527:col-128-cdh-10_9234
      WBPaper00061653:alh-4(hj221)_downregulated
      WBPaper00061753:csr-1(tor159)_upregulated_25C
      WBPaper00062056:lin-35(n745)_downregulated
      WBPaper00062156:jmjd-5(zr1234)_upregulated
      WBPaper00062446:nhr-8(hd117)_upregulated
      WBPaper00062456:doxycycline_upregulated_N2_transcript
      WBPaper00062534:fat-P-80_downregulated
      WBPaper00062534:fat-P-80_downregulated_ech-6(RNAi)
      WBPaper00064532:pals-25(icb98)_downregulated
      WBPaper00064661:lpd-3(ok2138)_upregulated
      WBPaper00064933:bcf-1(ylf1)_upregulated_transcript
      WBPaper00065086:JU1400_N.ferruginous_regulated
      WBPaper00065096:npr-8(ok1439)_upregulated_Day1_20C
      WBPaper00065315:mating_upregulated_Day2-7
      WBPaper00065581:hpk-1(pk1393)_upregulated
      WBPaper00065746:eat-2(ad1113)_downregulated
      WBPaper00065749:Heat-Shock_downregulated_endu-2(tm4977)
      WBPaper00065749:Heat-Shock_downregulated_N2
      WBPaper00065841:139_0
      WBPaper00066110:tetraploid_vs_diploid_upregulated
      WBPaper00025141:N2_Expressed_Genes
      WBPaper00031832:slr-2_regulated
      WBPaper00032948:FedUp
      WBPaper00034739:N2lessDR1350
      WBPaper00034739:RIL17lessRIL14
      WBPaper00035588:alg-1(-)_upregulated
      WBPaper00036130:mir-243_up_regulated
      WBPaper00036286:Pattern_G
      WBPaper00038172:aak-2overexpression_down_regulated
      WBPaper00038172:tax-6null_down_regulated
      WBPaper00040116:pRJ-FR.5_down_regulated
      WBPaper00040210:Chlorpyrifos_16C_regulated
      WBPaper00041939:control_vs_UVC-EtBr-exposed_48h
      WBPaper00046548:dafachronic-acid_upregulated
      WBPaper00047070:N2_starvation_downregulated
      WBPaper00048989:N2_rapamycin_upregulated
      WBPaper00056330:mrps-5(RNAi)_upregulated
    Interaction (65)
  Map_info: Positive: Positive_clone: T12E12 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: IV 1.89056
  Reference: WBPaper00055090
  Method: Gene