Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Gene: WBGene00015418

expand all nodes | collapse all nodes | view schema

Name Class

WBGene00015418SMapS_parentSequenceCHROMOSOME_III
IdentityVersion3
NameCGC_namepac-1Person_evidenceWBPerson6440
WBPerson440
Sequence_nameC04D8.1
Molecular_name (18)
Other_nameCEGAPAccession_evidenceEMBLU02289
CELE_C04D8.1Accession_evidenceNDBBX284603
Public_namepac-1
DB_infoDatabaseAceViewgene3J607
WormQTLgeneWBGene00015418
WormFluxgeneWBGene00015418
NDBlocus_tagCELE_C04D8.1
PanthergeneCAEEL|WormBase=WBGene00015418|UniProtKB=P34288
familyPTHR23176
NCBIgene176201
RefSeqproteinNM_001136361.5
NM_001306726.3
NM_001306727.4
NM_001306725.3
NM_066476.7
NM_001306728.4
SwissProtUniProtAccP34288
TrEMBLUniProtAccU4PM34
U4PRC7
U4PBN0
U4PBA1
UniProt_GCRPUniProtAccP34288
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:30:56WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
207 Feb 2008 17:23:14WBPerson2970Name_changeCGC_namepac-1
303 Nov 2008 13:41:14WBPerson1849EventAcquires_mergeWBGene00018372
Acquires_mergeWBGene00018372
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classpac
AlleleWBVar00275272Inferred_automaticallyFrom strain object: FT93
From strain object: FT99
WBVar00275271
WBVar00845142
WBVar00845143
WBVar00845144
WBVar00845145
WBVar00845146
WBVar00845147
WBVar00845148
WBVar00845149
WBVar01500260
WBVar00845150
WBVar00845151
WBVar02070796
WBVar00099967
WBVar00845152
WBVar00099969
WBVar00845153
WBVar01999745
WBVar00845154
WBVar00845155
WBVar00845156
WBVar01939318
WBVar00845157
WBVar01939319
WBVar00845158
WBVar00845159
WBVar00845160
WBVar00845161
WBVar00845162
WBVar00845163
WBVar01480033
WBVar00845164
WBVar00845165
WBVar01480034
WBVar00845166
WBVar01480035
WBVar00845167
WBVar01480036
WBVar00845168
WBVar00845169
WBVar00845170
WBVar00845171
WBVar00142462
WBVar00845172
WBVar02147044
WBVar01266279
WBVar01995590
WBVar00845173
WBVar00845174
WBVar01397073
WBVar01266280
WBVar00845175
WBVar01397074
WBVar01266287
WBVar00845176
WBVar00845177
WBVar00845178
WBVar00845179
WBVar00845180
WBVar00845181
WBVar02051180
WBVar00845182
WBVar00845183
WBVar00309929
WBVar00845184
WBVar00845185
WBVar00845186
WBVar02073262
WBVar00845187
WBVar00845188
WBVar00845189
WBVar01401651
WBVar01447126
WBVar01447127
WBVar00845190
WBVar00068323
WBVar02018994
WBVar01447128
WBVar00845191
WBVar01447130
WBVar00845192
WBVar01983975
WBVar01447131
WBVar00845193
WBVar01983976
WBVar01447133
WBVar00068328
WBVar00845194
WBVar00845195
WBVar00403505
WBVar00403506
WBVar00845196
WBVar00403507
WBVar00845197
WBVar02053440
WBVar00403508
WBVar00845198
WBVar02053441
WBVar00845199
WBVar00403509
WBVar00403510
WBVar01817908
WBVar00403511
WBVar00068338
WBVar00403512
WBVar00403513
WBVar00403514
WBVar00403515
WBVar01913304
WBVar00068343
WBVar00403516
WBVar01629041
WBVar01629042
WBVar00403517
WBVar02074219
WBVar00403518
WBVar00403519
WBVar00236769
WBVar00403520
WBVar00236770
WBVar00403521
WBVar00068353
WBVar00236771
WBVar00403522
WBVar00403523
WBVar01566988
WBVar00564318
WBVar01566989
WBVar00263217
WBVar00403524
WBVar00403525
WBVar01566990
WBVar00403526
WBVar01499774
WBVar01566991
WBVar00403527
WBVar01566992
WBVar00233833
WBVar00403528
WBVar01898733
WBVar00403529
WBVar00068363
WBVar00403530
WBVar00403531
WBVar00403532
WBVar00403533
WBVar00068368
WBVar00403534
WBVar01408979
WBVar00403535
WBVar01408980
WBVar00403536
WBVar00068373
WBVar00403537
WBVar01408981
WBVar00403538
WBVar01408982
WBVar00403539
WBVar01408985
WBVar00403540
WBVar00403541
WBVar00068378
WBVar00403542
WBVar00403543
WBVar00403544
WBVar01490776
WBVar00403545
WBVar00068383
WBVar00403546
WBVar01903924
WBVar00403547
WBVar01823296
WBVar00845054
WBVar00403548
WBVar00845055
WBVar00068388
WBVar00403549
WBVar00403550
WBVar00845056
WBVar00403551
WBVar00845057
WBVar01496671
WBVar00845058
WBVar00403552
WBVar00403553
WBVar00068393
WBVar00845059
WBVar00845060
WBVar00403554
WBVar00242998
WBVar00065539
WBVar00242999
WBVar00403555
WBVar01896365
WBVar00845061
WBVar00403556
WBVar00845062
WBVar00243000
WBVar00845063
WBVar00068398
WBVar00403557
WBVar00243001
WBVar00845064
WBVar00403558
WBVar00065544
WBVar00243002
WBVar00845065
WBVar00403559
WBVar00845066
WBVar00845067
WBVar00068403
WBVar00065549
WBVar00845068
WBVar00845069
WBVar00845070
WBVar00068408
WBVar00263258
WBVar00845071
WBVar00052667
WBVar00845072
WBVar00845073
WBVar00845074
WBVar01723029
WBVar00845075
WBVar00845076
WBVar00065564
WBVar00845077
WBVar00845078
WBVar00845079
WBVar00065569
WBVar00845080
WBVar00068423
WBVar00845081
WBVar00845082
WBVar01962899
WBVar01962900
WBVar00065574
WBVar00845083
WBVar00845084
WBVar00845085
WBVar00068428
WBVar00845086
WBVar00845087
WBVar00065579
WBVar00845088
WBVar00845089
WBVar00845090
WBVar00845091
WBVar00065584
WBVar00845092
WBVar00304305
WBVar01607167
WBVar00845093
WBVar00845094
WBVar00304306
WBVar01838246
WBVar00845095
WBVar00065589
WBVar00304307
WBVar01838248
WBVar00845096
WBVar01838250
WBVar00845097
WBVar01838251
WBVar00845098
WBVar00845099
WBVar01838252
WBVar00845100
WBVar01838253
WBVar02145153
WBVar00065599
WBVar00845101
WBVar01838254
WBVar01838255
WBVar00845102
WBVar01838256
WBVar00845103
WBVar00065604
WBVar00845104
WBVar00093181
WBVar00845105
WBVar00845106
WBVar00845107
WBVar00065609
WBVar00845108
WBVar02069641
WBVar01990245
WBVar00259248
WBVar00845109
WBVar00845110
WBVar00313126
WBVar00845111
WBVar00845112
WBVar00845113
WBVar00845114
WBVar00845115
WBVar00845116
WBVar00845117
WBVar00845118
WBVar01645690
WBVar00845119
WBVar01645691
WBVar01331580
WBVar01645692
WBVar00845120
WBVar01645693
WBVar00845121
WBVar01952420
WBVar01645694
WBVar00845122
WBVar00845123
WBVar01952421
WBVar00845124
WBVar01952422
WBVar00845125
WBVar01893630
WBVar01952423
WBVar00845126
WBVar01952424
WBVar01952425
WBVar00845127
WBVar01952426
WBVar00845128
WBVar00845129
WBVar00845130
WBVar00845131
WBVar02132393
WBVar00845132
WBVar02132394
WBVar00845133
WBVar00845134
WBVar01489756
WBVar00845135
WBVar00845136
WBVar00845137
WBVar00845138
WBVar00845139
WBVar00845140
WBVar00845141
StrainWBStrain00032310
WBStrain00007530
WBStrain00007531
RNASeq_FPKM (74)
GO_annotation (18)
Contained_in_operonCEOP3814
Ortholog (40)
ParalogWBGene00008006Caenorhabditis elegansFrom_analysisPanther
Structured_descriptionConcise_descriptionpac-1 encodes a RhoGAP (Rho guanosine triphosphatase (GTPase) activating protein); in the embryo, PAC-1 is essential for establishment of radial (inner-outer) asymmetry and specifically, for differential localization of PAR-6, PAR-3, and PKC-3 to outer somatic cell surfaces devoid of cell-cell contacts; in regulating PAR protein localization, PAC-1 appears to act by spatially regulating activity of the CDC-42 Rho GTPase which can bind PAR-6 and is required, genetically, for PAR-6 localization to the outer cell surface; a PAC-1::GFP fusion protein expressed in the early embryo and in cultured embryos localizes to points of cell-cell contact.Paper_evidenceWBPaper00031968
Curator_confirmedWBPerson1843
Date_last_updated30 Jun 2008 00:00:00
Automated_descriptionEnables GTPase activator activity. Involved in Rho protein signal transduction; protein localization; and regulation of gastrulation. Located in cell junction. Expressed in anus; epithelial cell; hypodermis; pharynx; and pm7. Is an ortholog of human ARHGAP23 (Rho GTPase activating protein 23).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSC04D8.1a
C04D8.1b
C04D8.1d
C04D8.1e
C04D8.1f
C04D8.1g
Corresponding_CDS_historyC04D8.1:wp92
C04D8.1a:wp196
C04D8.1c:wp275
Corresponding_transcriptC04D8.1a.1
C04D8.1b.1
C04D8.1d.1
C04D8.1e.1
C04D8.1f.1
C04D8.1g.1
Other_sequence (24)
Associated_feature (62)
Experimental_infoRNAi_resultWBRNAi00010104Inferred_automaticallyRNAi_primary
WBRNAi00039589Inferred_automaticallyRNAi_primary
WBRNAi00058797Inferred_automaticallyRNAi_primary
WBRNAi00111060Inferred_automaticallyRNAi_primary
WBRNAi00021621Inferred_automaticallyRNAi_primary
WBRNAi00005915Inferred_automaticallyRNAi_primary
WBRNAi00005216Inferred_automaticallyRNAi_primary
Expr_patternExpr68
Expr2035
Expr8161
Expr12368
Expr13517
Expr1016440
Expr1036597
Expr1143693
Expr2014677
Expr2032910
Drives_constructWBCnstr00020487
WBCnstr00020494
WBCnstr00028863
Construct_product (16)
Microarray_resultsSMD_9ZC21.8
SMD_C04D8.1
SMD_ZC21.8
174038_at
176267_at
189101_at
A_12_P115271
A_12_P115587
Aff_C04D8.1
GPL13394_WBGene00015418
GPL13914_C04D8.1
GPL14144_C04D8.1a_3368-3427_0.853_36_A
GPL14144_C04D8.1a_3558-3617_0.842_47_B
GPL14144_C04D8.1a_4593-4652_0.953_1_C
GPL19516_CGZ0002305
GPL19516_CGZ0002306
GPL19516_CGZ0002307
GPL19516_CGZ0002308
GPL19516_CGZ0002309
GPL19516_CGZ0002310
GPL19516_CGZ0002311
GPL21109_C04D8.1a
GPL21109_Cat_F42H10.9
GPL3518_CE24970
GPL3518_CE26357
GPL8304_CE_WBGene00015418_A
GPL8304_CE_WBGene00015418_B
GPL8304_CE_WBGene00015418_C
GPL8304_CE_WBGene00018372_A
GPL8673_C04D8_1P03024
GPL8673_C04D8_1P03512
GPL8673_C04D8_1P03789
GPL8673_F42H10_9P00345
GPL8673_F42H10_9P00465
GPL8673_F42H10_9P00818
GPL9450_C04D8.1
GPL9450_F42H10.9
cea2.i.19588
cea2.p.55947
Expression_cluster (124)
Interaction (75)
Map_infoMapIIIPosition-0.25513Error0.000591
PositivePositive_cloneC04D8Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
Reference (16)
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene