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WormBase Tree Display for Gene: WBGene00001485

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Name Class

WBGene00001485EvidencePerson_evidenceWBPerson3175
Author_evidenceKwasnicka DA
SMapS_parentSequenceY113G7A
IdentityVersion1
NameCGC_namefre-1
Sequence_nameY113G7A.8
Molecular_nameY113G7A.8a
Y113G7A.8a.1
CE23279
Y113G7A.8b
CE48258
Y113G7A.8b.1
Other_nametag-62CGC_data_submission
CELE_Y113G7A.8Accession_evidenceNDBBX284605
Public_namefre-1
DB_infoDatabase (11)
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:24WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classfre
AlleleWBVar01466610
WBVar01104583
WBVar01752998
WBVar01752999
WBVar00229324
WBVar01104584
WBVar01466611
WBVar01466612
WBVar01104585
WBVar01753000
WBVar01753001
WBVar01104586
WBVar00229326
WBVar01104587
WBVar01753002
WBVar00229327
WBVar00234866
WBVar01104588
WBVar01753003
WBVar00234867
WBVar01104589
WBVar01753004
WBVar00229330
WBVar01753005
WBVar00234868
WBVar01104590
WBVar01694274
WBVar00229332
WBVar00229333
WBVar01694275
WBVar01104591
WBVar01753006
WBVar00234869
WBVar01678406
WBVar01499709
WBVar01678407
WBVar00234870
WBVar01753007
WBVar01104592
WBVar01104593
WBVar01678408
WBVar01753008
WBVar00234871
WBVar01753009
WBVar01678409
WBVar01104594
WBVar01941140
WBVar01104595
WBVar01678410
WBVar01753010
WBVar01941141
WBVar01104596
WBVar00229338
WBVar01678411
WBVar01941142
WBVar01753011
WBVar01941143
WBVar01104597
WBVar01753012
WBVar01941144
WBVar01598697
WBVar01104598
WBVar00229340
WBVar01598698
WBVar01941145
WBVar01104599
WBVar01598699
WBVar01941146
WBVar02083259
WBVar01941147
WBVar02083260
WBVar01978439
WBVar01598700
WBVar02083261
WBVar01598701
WBVar01941148
WBVar01978440
WBVar02083262
WBVar01978441
WBVar00603256
WBVar01978442
WBVar02083263
WBVar02120068
WBVar01978443
WBVar02083264
WBVar01978444
WBVar02083265
WBVar01978445
WBVar02111053
WBVar02083266
WBVar01978446
WBVar00105831
WBVar01978447
WBVar00105832
WBVar01978448
WBVar01978449
WBVar01978450
WBVar00105837
WBVar01978451
WBVar00105841
WBVar01978452
WBVar00105842
WBVar02015415
WBVar01543905
WBVar00105844
WBVar01543906
WBVar02015416
WBVar02071374
WBVar00105845
WBVar01543907
WBVar02071375
WBVar00105846
WBVar01543908
WBVar01543909
WBVar00105847
WBVar00105851
WBVar01543910
WBVar02112170
WBVar01543911
WBVar02074928
WBVar01543912
WBVar01693571
WBVar01543913
WBVar01693572
WBVar01543914
WBVar01543915
WBVar01693573
WBVar01543916
WBVar01543917
WBVar02075306
WBVar01543918
WBVar01543919
WBVar01543920
WBVar02068975
WBVar01543921
WBVar01543922
WBVar01499566
WBVar02078866
WBVar00092036
WBVar01900007
WBVar00489441
WBVar00489442
WBVar01900008
WBVar02005104
WBVar00489443
WBVar01900009
WBVar00489444
WBVar00489445
WBVar00489446
WBVar00489447
WBVar00489448
WBVar00489449
WBVar02116251
WBVar00489450
WBVar02116252
WBVar02079624
WBVar00489451
WBVar00489452
WBVar00489453
WBVar00489454
WBVar00489455
WBVar00489456
WBVar00489457
WBVar00489458
WBVar00599021
WBVar02095280
WBVar00489459
WBVar02074418
WBVar00489460
WBVar00489461
WBVar02074419
WBVar01525264
WBVar00489462
WBVar01525265
WBVar00489463
WBVar02097126
WBVar01525266
WBVar00489464
WBVar01913889
WBVar00261390
WBVar00489465
WBVar01525267
WBVar01913890
WBVar01913891
WBVar00489466
WBVar01786782
WBVar01525268
WBVar01913892
WBVar01525269
WBVar02112957
WBVar02138393
WBVar01525270
WBVar01525271
WBVar02138394
WBVar01525272
WBVar01525273
WBVar01525274
WBVar00238633
WBVar01525275
WBVar00238634
WBVar01525276
WBVar00238636
WBVar01525277
WBVar01525278
WBVar00238637
WBVar01525279
WBVar00238638
WBVar01525280
WBVar00238639
WBVar01525281
WBVar00238640
WBVar00238641
WBVar01525282
WBVar01525283
WBVar01525284
WBVar01494833
WBVar01525285
WBVar01639418
WBVar01525287
WBVar01639419
WBVar01549371
WBVar01549372
WBVar01639420
WBVar01525288
WBVar01525289
WBVar01549373
WBVar01525290
WBVar02051062
WBVar01525291
WBVar01525292
WBVar02063287
WBVar01525293
WBVar02091633
WBVar02063288
WBVar01525294
WBVar01525295
WBVar02063289
WBVar01525296
WBVar02063290
WBVar01829623
WBVar02063291
WBVar01525297
WBVar01499446
WBVar01829624
WBVar01485829
WBVar02063292
WBVar01829625
WBVar01485830
WBVar01525299
WBVar01829626
WBVar01500000
WBVar01525300
WBVar01485831
WBVar02063293
WBVar01485832
WBVar02013617
WBVar01525301
WBVar01525302
WBVar01485833
WBVar01525303
WBVar01525304
WBVar01525305
WBVar01525306
WBVar01525307
WBVar02026075
WBVar01525308
WBVar02100479
WBVar02026076
WBVar01525309
WBVar01525310
WBVar02026077
WBVar01525311
WBVar01877324
WBVar02026078
WBVar01525312
WBVar01877325
WBVar02026079
WBVar02026080
WBVar01525313
WBVar00261802
WBVar01877326
WBVar00072224
WBVar02026081
WBVar01877327
WBVar00072225
WBVar02026082
WBVar01877328
WBVar00072226
WBVar01877329
WBVar01877330
WBVar00072227
WBVar02070361
WBVar00145580
WBVar01877331
WBVar00072228
WBVar00072229
WBVar01877332
WBVar00072230
WBVar01877333
WBVar01822230
WBVar00072231
WBVar02085771
WBVar01877334
WBVar02085772
WBVar01877335
WBVar00072232
WBVar01498549
WBVar02118713
WBVar02085773
WBVar00072233
WBVar01877336
WBVar00072234
WBVar01877337
WBVar02085774
WBVar00072235
WBVar00299040
WBVar01877338
WBVar01877339
WBVar00072236
WBVar00072237
WBVar01877340
WBVar01104543
WBVar01877341
WBVar00072238
WBVar01104544
WBVar00072239
WBVar01498925
WBVar01877342
WBVar01877343
WBVar01104545
WBVar01954431
WBVar00072240
WBVar01104546
WBVar01954432
WBVar00072241
WBVar01104547
WBVar01954433
WBVar00072242
WBVar01104548
WBVar00072243
WBVar01813579
WBVar00072244
WBVar01104549
WBVar01813580
WBVar01499299
WBVar01104550
WBVar00072245
WBVar01813581
WBVar00072246
WBVar01104551
WBVar01617681
WBVar01104552
WBVar01617682
WBVar01104553
WBVar01617683
WBVar01104554
WBVar01104555
WBVar02121492
WBVar01104556
WBVar01104557
WBVar01570833
WBVar01104558
WBVar01570834
WBVar01104559
WBVar01104560
WBVar01104561
WBVar01104562
WBVar01104563
WBVar01104564
WBVar01104565
WBVar01926377
WBVar01104566
WBVar01926378
WBVar01104567
WBVar01104568
WBVar01926379
WBVar01104569
WBVar02088380
WBVar01926380
WBVar02048346
WBVar02088381
WBVar01104570
WBVar01926381
WBVar01926382
WBVar02088382
WBVar01104571
WBVar01703310
WBVar01926383
WBVar01104572
WBVar01654762
WBVar01926384
WBVar01104573
WBVar01926385
WBVar01104574
WBVar01926386
WBVar01104575
WBVar02120406
WBVar01104576
WBVar01926387
WBVar02120407
WBVar01104577
WBVar01498958
WBVar01926388
WBVar01104578
WBVar02124642
WBVar01926389
WBVar01104579
WBVar01926390
WBVar01466604
WBVar01104580
WBVar01926391
WBVar01104581
WBVar02056348
WBVar01466607
WBVar01926392
WBVar01466608
WBVar01752997
WBVar01104582
StrainWBStrain00035603
WBStrain00031609
RNASeq_FPKM (74)
GO_annotation (16)
Contained_in_operonCEOP5500
Ortholog (38)
ParalogWBGene00001262Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00006510Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00021314Caenorhabditis elegansFrom_analysisWormBase-Compara
Structured_descriptionConcise_descriptionfre-1 encodes an NADPH-dependent flavin reductase; fre-1 is the downstream gene in an operon with dcs-1, which encodes a scavenger mRNA decapping enzyme; reporter fusions using dcs-1 upstream sequence direct expression throughout the life cycle in neurons and pharyngeal muscle; expression is present in dauer larvae and enhanced by heat shock.Paper_evidenceWBPaper00006128
Curator_confirmedWBPerson1843
Date_last_updated27 Nov 2006 00:00:00
Automated_descriptionPredicted to enable FMN binding activity; flavin adenine dinucleotide binding activity; and oxidoreductase activity. Predicted to be involved in iron-sulfur cluster assembly. Located in nucleus. Expressed in neurons and pharyngeal muscle cell. Is an ortholog of human NDOR1 (NADPH dependent diflavin oxidoreductase 1).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSY113G7A.8a
Y113G7A.8b
Corresponding_transcriptY113G7A.8a.1
Y113G7A.8b.1
Other_sequence (45)
Associated_feature (13)
Experimental_infoRNAi_resultWBRNAi00055389Inferred_automaticallyRNAi_primary
WBRNAi00036580Inferred_automaticallyRNAi_primary
Expr_patternExpr2642
Expr2644
Expr1012671
Expr1158905
Expr2011877
Expr2030115
Drives_constructWBCnstr00010884
Construct_productWBCnstr00010884
Microarray_results (22)
Expression_cluster (78)
Interaction (159)
Map_infoMapVPosition24.5786Error0.027082
PositivePositive_cloneY113G7AInferred_automaticallyFrom CDS info
From sequence, transcript, pseudogene data
Mapping_dataMulti_point4325
4745
5484
Pseudo_map_position
ReferenceWBPaper00006128
WBPaper00038491
WBPaper00055090
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene