WormBase Tree Display for Gene: WBGene00004900
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| WBGene00004900 | Evidence | CGC_data_submission | |||||||
|---|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | W03G9 | ||||||
| Identity | Version | 2 | |||||||
| Name | CGC_name | snf-1 | Person_evidence | WBPerson508 | |||||
| Sequence_name | W03G9.1 | ||||||||
| Molecular_name | W03G9.1 | ||||||||
| W03G9.1.1 | |||||||||
| CE30701 | |||||||||
| Other_name | CELE_W03G9.1 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | snf-1 | ||||||||
| DB_info | Database | AceView | gene | 1F551 | |||||
| WormQTL | gene | WBGene00004900 | |||||||
| WormFlux | gene | WBGene00004900 | |||||||
| NDB | locus_tag | CELE_W03G9.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00004900|UniProtKB=O44752 | |||||||
| family | PTHR11616 | ||||||||
| NCBI | gene | 172119 | |||||||
| RefSeq | protein | NM_059090.10 | |||||||
| TREEFAM | TREEFAM_ID | TF318135 | |||||||
| TrEMBL | UniProtAcc | O44752 | |||||||
| UniProt_GCRP | UniProtAcc | O44752 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:36 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| 2 | 28 Sep 2010 16:54:30 | WBPerson2970 | Name_change | Other_name | gat-1 removed and attached to snf-11 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | snf | ||||||||
| Allele | WBVar00333544 | ||||||||
| WBVar00333545 | |||||||||
| WBVar00333546 | |||||||||
| WBVar00333547 | |||||||||
| WBVar00333548 | |||||||||
| WBVar00333549 | |||||||||
| WBVar00333550 | |||||||||
| WBVar01499919 | |||||||||
| WBVar01496254 | |||||||||
| WBVar00635400 | |||||||||
| WBVar00635401 | |||||||||
| WBVar00635402 | |||||||||
| WBVar00635403 | |||||||||
| WBVar00635404 | |||||||||
| WBVar00635405 | |||||||||
| WBVar00635406 | |||||||||
| WBVar00635407 | |||||||||
| WBVar00635408 | |||||||||
| WBVar00635409 | |||||||||
| WBVar00635410 | |||||||||
| WBVar00635411 | |||||||||
| WBVar00635412 | |||||||||
| WBVar00635413 | |||||||||
| WBVar00635414 | |||||||||
| WBVar01431521 | |||||||||
| WBVar01499786 | |||||||||
| WBVar01431522 | |||||||||
| WBVar01431523 | |||||||||
| WBVar00092070 | |||||||||
| WBVar01911674 | |||||||||
| WBVar00153437 | |||||||||
| WBVar00153438 | |||||||||
| WBVar01282632 | |||||||||
| WBVar01282633 | |||||||||
| WBVar01282634 | |||||||||
| WBVar01498959 | |||||||||
| Strain | WBStrain00031631 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00033334 | ||||||||
| 00033335 | |||||||||
| 00033336 | |||||||||
| 00033337 | |||||||||
| 00113310 | |||||||||
| Ortholog (36) | |||||||||
| Paralog (13) | |||||||||
| Structured_description | Automated_description | Predicted to enable symporter activity. Predicted to be involved in sodium ion transmembrane transport. Predicted to be located in membrane. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | W03G9.1 | |||||||
| Corresponding_transcript | W03G9.1.1 | ||||||||
| Other_sequence (28) | |||||||||
| Associated_feature (14) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00077176 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00001577 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00004401 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00077178 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00077179 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00054725 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00116430 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00077177 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1026896 | ||||||||
| Expr1032437 | |||||||||
| Expr1158262 | |||||||||
| Expr2015946 | |||||||||
| Expr2034181 | |||||||||
| Drives_construct | WBCnstr00035334 | ||||||||
| Construct_product | WBCnstr00035334 | ||||||||
| Microarray_results (21) | |||||||||
| Expression_cluster (121) | |||||||||
| Interaction (20) | |||||||||
| Map_info | Map | I | Position | -0.43441 | Error | 0.001612 | |||
| Positive | Positive_clone | W03G9 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Mapping_data | Multi_point | 4786 | |||||||
| 5054 | |||||||||
| 5501 | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00015781 | ||||||||
| WBPaper00024600 | |||||||||
| WBPaper00043908 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Sequence connection from [Rand JB] | ||||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
