WormBase Tree Display for Gene: WBGene00007013
expand all nodes | collapse all nodes | view schema
| WBGene00007013 | Evidence | Author_evidence | Bourbon H-M | |||||
|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | Y62F5A | |||||
| Identity | Version | 1 | ||||||
| Name | CGC_name | mdt-8 | ||||||
| Sequence_name | Y62F5A.1 | |||||||
| Molecular_name | Y62F5A.1a | |||||||
| Y62F5A.1a.1 | ||||||||
| CE24544 | ||||||||
| Y62F5A.1b | ||||||||
| CE24545 | ||||||||
| Y62F5A.1b.1 | ||||||||
| Other_name | CELE_Y62F5A.1 | Accession_evidence | NDB | BX284602 | ||||
| Public_name | mdt-8 | |||||||
| DB_info | Database | AceView | gene | 2L818 | ||||
| WormQTL | gene | WBGene00007013 | ||||||
| WormFlux | gene | WBGene00007013 | ||||||
| NDB | locus_tag | CELE_Y62F5A.1 | ||||||
| Panther | gene | CAEEL|WormBase=WBGene00007013|UniProtKB=Q9U1W2 | ||||||
| family | PTHR13074 | |||||||
| NCBI | gene | 174763 | ||||||
| RefSeq | protein | NM_064063.5 | ||||||
| NM_064062.5 | ||||||||
| SwissProt | UniProtAcc | Q9U1W2 | ||||||
| TREEFAM | TREEFAM_ID | TF316778 | ||||||
| UniProt_GCRP | UniProtAcc | Q9U1W2 | ||||||
| Species | Caenorhabditis elegans | |||||||
| History | Version_change | 1 | 14 May 2004 11:48:16 | WBPerson1845 | Event | Created | ||
| Status | Live | |||||||
| Gene_info | Biotype | SO:0001217 | ||||||
| Gene_class | mdt | |||||||
| Allele | WBVar01851387 | |||||||
| WBVar01851388 | ||||||||
| WBVar02002988 | ||||||||
| WBVar01851389 | ||||||||
| WBVar01499702 | ||||||||
| WBVar01498604 | ||||||||
| WBVar01498613 | ||||||||
| WBVar01666618 | ||||||||
| WBVar01666619 | ||||||||
| WBVar01498435 | ||||||||
| WBVar01666620 | ||||||||
| WBVar01982824 | ||||||||
| WBVar01394183 | ||||||||
| WBVar01394184 | ||||||||
| WBVar00175940 | ||||||||
| WBVar00175941 | ||||||||
| WBVar00175942 | ||||||||
| WBVar01538706 | ||||||||
| WBVar00175943 | ||||||||
| WBVar00175944 | ||||||||
| WBVar01792290 | ||||||||
| WBVar01792291 | ||||||||
| WBVar01547106 | ||||||||
| WBVar01440052 | ||||||||
| WBVar01960292 | ||||||||
| WBVar01784554 | ||||||||
| WBVar00105939 | ||||||||
| WBVar01244954 | ||||||||
| WBVar01244956 | ||||||||
| WBVar02081155 | ||||||||
| WBVar02067006 | ||||||||
| WBVar00254629 | ||||||||
| WBVar01605097 | ||||||||
| WBVar01605098 | ||||||||
| WBVar01312042 | ||||||||
| WBVar01413957 | ||||||||
| WBVar00378583 | ||||||||
| WBVar00378584 | ||||||||
| WBVar00769624 | ||||||||
| WBVar00769625 | ||||||||
| WBVar00378585 | ||||||||
| WBVar00769626 | ||||||||
| WBVar00378586 | ||||||||
| WBVar00378587 | ||||||||
| WBVar00769627 | ||||||||
| WBVar00769628 | ||||||||
| WBVar01498941 | ||||||||
| WBVar00769629 | ||||||||
| WBVar00769630 | ||||||||
| WBVar00229653 | ||||||||
| WBVar00769631 | ||||||||
| WBVar00229655 | ||||||||
| WBVar00229656 | ||||||||
| WBVar00769632 | ||||||||
| WBVar00769633 | ||||||||
| WBVar00769634 | ||||||||
| WBVar00769635 | ||||||||
| WBVar00769636 | ||||||||
| WBVar00769637 | ||||||||
| WBVar00769638 | ||||||||
| WBVar02035916 | ||||||||
| WBVar00769639 | ||||||||
| WBVar00769640 | ||||||||
| WBVar00769641 | ||||||||
| WBVar01998886 | ||||||||
| WBVar00769642 | ||||||||
| WBVar01998887 | ||||||||
| WBVar00769643 | ||||||||
| WBVar02033611 | ||||||||
| WBVar00769644 | ||||||||
| WBVar02033612 | ||||||||
| WBVar00769645 | ||||||||
| WBVar00769646 | ||||||||
| WBVar01692051 | ||||||||
| WBVar00769647 | ||||||||
| WBVar01851385 | ||||||||
| WBVar01851386 | ||||||||
| RNASeq_FPKM (74) | ||||||||
| GO_annotation | 00098457 | |||||||
| 00098458 | ||||||||
| 00098459 | ||||||||
| 00098460 | ||||||||
| 00098461 | ||||||||
| 00098462 | ||||||||
| 00098463 | ||||||||
| 00115202 | ||||||||
| 00115203 | ||||||||
| 00115204 | ||||||||
| Contained_in_operon | CEOP2552 | |||||||
| Ortholog (33) | ||||||||
| Structured_description | Automated_description | Predicted to enable RNA polymerase II cis-regulatory region sequence-specific DNA binding activity and transcription coregulator activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be located in nucleus. Predicted to be part of core mediator complex and mediator complex. Is an ortholog of human MED8 (mediator complex subunit 8). | Paper_evidence | WBPaper00065943 | ||||
| Curator_confirmed | WBPerson324 | |||||||
| WBPerson37462 | ||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | |||||||
| Molecular_info | Corresponding_CDS | Y62F5A.1a | ||||||
| Y62F5A.1b | ||||||||
| Corresponding_transcript | Y62F5A.1a.1 | |||||||
| Y62F5A.1b.1 | ||||||||
| Other_sequence (26) | ||||||||
| Associated_feature (12) | ||||||||
| Transcription_factor | WBTranscriptionFactor000540 | |||||||
| Experimental_info | RNAi_result (18) | |||||||
| Expr_pattern | Chronogram993 | |||||||
| Expr7088 | ||||||||
| Expr1011508 | ||||||||
| Expr1033003 | ||||||||
| Expr1161291 | ||||||||
| Expr2013486 | ||||||||
| Expr2031720 | ||||||||
| Drives_construct | WBCnstr00002645 | |||||||
| Microarray_results (25) | ||||||||
| Expression_cluster (118) | ||||||||
| Interaction (61) | ||||||||
| Map_info | Map | II | Position | 3.62057 | Error | 0.003541 | ||
| Positive | Positive_clone | Y62F5A | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Pseudo_map_position | ||||||||
| Reference | WBPaper00006530 | |||||||
| WBPaper00027707 | ||||||||
| WBPaper00029038 | ||||||||
| WBPaper00031331 | ||||||||
| WBPaper00038491 | ||||||||
| WBPaper00055090 | ||||||||
| WBPaper00059726 | ||||||||
| WBPaper00065308 | ||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||
| Method | Gene |
