WormBase Tree Display for Gene: WBGene00008279
expand all nodes | collapse all nodes | view schema
| WBGene00008279 | SMap | S_parent | Sequence | C53C7 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | C53C7.3 | |||||||
| Molecular_name | C53C7.3 | ||||||||
| C53C7.3.1 | |||||||||
| CE34167 | |||||||||
| Other_name | CELE_C53C7.3 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | C53C7.3 | ||||||||
| DB_info | Database | AceView | gene | XN667 | |||||
| WormQTL | gene | WBGene00008279 | |||||||
| WormFlux | gene | WBGene00008279 | |||||||
| NDB | locus_tag | CELE_C53C7.3 | |||||||
| NCBI | gene | 183748 | |||||||
| RefSeq | protein | NM_077764.2 | |||||||
| TrEMBL | UniProtAcc | Q9XXU2 | |||||||
| UniProt_GCRP | UniProtAcc | Q9XXU2 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:48 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele | WBVar01499887 | ||||||||
| WBVar01499519 | |||||||||
| WBVar01499888 | |||||||||
| WBVar01499710 | |||||||||
| WBVar02032877 | |||||||||
| WBVar00101411 | |||||||||
| WBVar00053852 | |||||||||
| WBVar00083936 | |||||||||
| WBVar01198861 | |||||||||
| WBVar00216962 | |||||||||
| WBVar01198862 | |||||||||
| WBVar01198863 | |||||||||
| WBVar01198864 | |||||||||
| WBVar01198865 | |||||||||
| WBVar01198866 | |||||||||
| WBVar01198867 | |||||||||
| WBVar01198868 | |||||||||
| WBVar01198869 | |||||||||
| WBVar01198870 | |||||||||
| WBVar01198871 | |||||||||
| WBVar01544546 | |||||||||
| WBVar01198872 | |||||||||
| WBVar01544547 | |||||||||
| WBVar01198873 | |||||||||
| WBVar01198874 | |||||||||
| WBVar01198875 | |||||||||
| WBVar01198876 | |||||||||
| WBVar01198877 | |||||||||
| WBVar01198878 | |||||||||
| WBVar01198879 | |||||||||
| WBVar01198880 | |||||||||
| WBVar01198881 | |||||||||
| WBVar00520985 | |||||||||
| WBVar00520986 | |||||||||
| WBVar00520987 | |||||||||
| WBVar00520988 | |||||||||
| WBVar00520989 | |||||||||
| WBVar00520990 | |||||||||
| WBVar00315385 | |||||||||
| WBVar01703471 | |||||||||
| WBVar01703472 | |||||||||
| WBVar01835237 | |||||||||
| WBVar00313592 | |||||||||
| WBVar01498960 | |||||||||
| WBVar01500067 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00104683 | ||||||||
| 00104684 | |||||||||
| Ortholog | chrX_pilon.g20340 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| Paralog | WBGene00010519 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| Structured_description | Automated_description | Enriched in ABplpaapap; ABprpaapap; and neurons based on single-cell RNA-seq and RNA-seq studies. Is affected by several genes including daf-16; daf-2; and sir-2.1 based on microarray; tiling array; and RNA-seq studies. Is affected by five chemicals including Psoralens; allantoin; and metformin based on RNA-seq studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C53C7.3 | |||||||
| Corresponding_CDS_history | C53C7.3:wp102 | ||||||||
| Corresponding_transcript | C53C7.3.1 | ||||||||
| Associated_feature | WBsf1007508 | ||||||||
| WBsf1007509 | |||||||||
| WBsf1007510 | |||||||||
| WBsf1024172 | |||||||||
| WBsf1024173 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00012359 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00043088 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00030112 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1022594 | ||||||||
| Expr1033595 | |||||||||
| Expr1147053 | |||||||||
| Expr2001890 | |||||||||
| Expr2020115 | |||||||||
| Drives_construct | WBCnstr00033089 | ||||||||
| Construct_product | WBCnstr00033089 | ||||||||
| Microarray_results (14) | |||||||||
| Expression_cluster (57) | |||||||||
| Interaction | WBInteraction000030505 | ||||||||
| WBInteraction000269151 | |||||||||
| WBInteraction000384138 | |||||||||
| WBInteraction000508619 | |||||||||
| WBInteraction000508674 | |||||||||
| WBInteraction000508715 | |||||||||
| WBInteraction000547531 | |||||||||
| WBInteraction000547587 | |||||||||
| WBInteraction000547588 | |||||||||
| WBInteraction000550824 | |||||||||
| Map_info | Positive | Positive_clone | C53C7 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | X | 9.77127 | |||||||
| Method | Gene |
