WormBase Tree Display for Gene: WBGene00012682

WBGene00012682 SMap: S_parent: Sequence: Y39B6A
  Identity: Version: 2
    Name: CGC_name: asp-16 Person_evidence: WBPerson261
      Sequence_name: Y39B6A.23
      Molecular_name: Y39B6A.23
        Y39B6A.23.1
        CE29864
      Other_name: Y39B6B.j Curator_confirmed: WBPerson1983
          Remark: Old cosmid naming mapped via unique overlapping PCR_product on CDSs
        CELE_Y39B6A.23 Accession_evidence: NDB BX284605
      Public_name: asp-16
    DB_info: Database (11)
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:54 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 23 Nov 2012 14:10:21 WBPerson2970 Name_change: CGC_name: asp-16
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: asp
    Allele: WBVar01977869
      WBVar01499709
      WBVar02105341
      WBVar01597404
      WBVar01597405
      WBVar01597406
      WBVar01597407
      WBVar01597408
      WBVar01597409
      WBVar01597410
      WBVar01597411
      WBVar01597412
      WBVar01597413
      WBVar01597414
      WBVar01597415
      WBVar01597416
      WBVar01597417
      WBVar02071933
      WBVar01597418
      WBVar01597419
      WBVar01689884
      WBVar01689885
      WBVar01597420
      WBVar01465794
      WBVar01465795
      WBVar01465796
      WBVar01465797
      WBVar01465798
      WBVar01465799
      WBVar01465800
      WBVar01499566
      WBVar01639016
      WBVar01485600
      WBVar01639017
      WBVar01639018
      WBVar01639019
      WBVar00065531
      WBVar01522862
      WBVar02025684
      WBVar00065536
      WBVar00065541
      WBVar00065546
      WBVar01876003
      WBVar01876004
      WBVar01097323
      WBVar01097324
      WBVar01876005
      WBVar01097325
      WBVar01097326
      WBVar01499446
      WBVar01829240
      WBVar01097327
      WBVar01097328
      WBVar01097329
      WBVar01750697
      WBVar01097330
      WBVar01750698
      WBVar01097331
      WBVar01750699
      WBVar01097332
      WBVar01750700
      WBVar02072577
      WBVar01097333
      WBVar01750701
      WBVar01097334
      WBVar01097335
      WBVar01750702
      WBVar01097336
      WBVar01097337
      WBVar01097338
      WBVar01097339
      WBVar02138249
      WBVar01097340
      WBVar01097341
      WBVar01097342
      WBVar01097343
      WBVar01097344
      WBVar01097345
      WBVar01097346
      WBVar01097347
      WBVar01097348
      WBVar01097349
      WBVar01097350
      WBVar01498549
      WBVar01097351
      WBVar01097352
      WBVar02079323
      WBVar01097353
      WBVar01097354
      WBVar01499299
      WBVar00486964
      WBVar00486965
      WBVar00486966
      WBVar00486967
      WBVar00069779
      WBVar00486968
      WBVar00486969
      WBVar00486970
      WBVar00486971
      WBVar00486972
      WBVar02071324
      WBVar02071325
      WBVar01498958
    RNASeq_FPKM (74)
    GO_annotation: 00084795
      00084796
      00084797
      00119712
      00119713
    Ortholog (47)
    Paralog (17)
    Structured_description: Automated_description: Predicted to enable aspartic-type endopeptidase activity. Predicted to be involved in proteolysis. Predicted to be located in lysosome. Human ortholog(s) of this gene implicated in several diseases, including artery disease (multiple); chronic fatigue syndrome; and congenital adrenal hyperplasia. Is an ortholog of human PGC (progastricsin) and REN (renin). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Disease_info: Potential_model (17)
  Molecular_info: Corresponding_CDS: Y39B6A.23
    Corresponding_transcript: Y39B6A.23.1
    Other_sequence: ACC21341_1
      EY465139.1
      MH05110
      MH10000
      Acan_isotig10539
      ACC03533_2
      PTC03231_1
      SSC02957_1
    Associated_feature: WBsf1003109
  Experimental_info: RNAi_result: WBRNAi00056177 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1014753
      Expr1159681
    Microarray_results: A_12_P111650
      GPL14144_Y39B6A.23_1039-1098_0.956_1_A
      GPL19516_CGZ0044834
      GPL21109_Y39B6A.23
      GPL3518_CE29864
      GPL8304_CE_WBGene00012682_A
      GPL8673_Y39B6A_23P00167
      GPL8673_Y39B6A_23P00601
      GPL8673_Y39B6A_23P01056
    Expression_cluster (69)
  Map_info: Map: V Position: 18.4987
    Positive: Positive_clone: Y39B6A Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00038491
    WBPaper00055090
    WBPaper00059378
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene