WormBase Tree Display for Gene: WBGene00013058

WBGene00013058 SMap: S_parent: Sequence: Y51A2A
  Identity: Version: 4
    Name: CGC_name: clec-247 Person_evidence: WBPerson2531
      Sequence_name: Y51A2A.1
      Molecular_name: Y51A2A.1
        Y51A2A.1.1
        CE48136
      Other_name: CELE_Y51A2A.1 Accession_evidence: NDB BX284605
      Public_name: clec-247
    DB_info: Database: AceView gene 5S769
        WormQTL gene WBGene00013058
        WormFlux gene WBGene00013058
        NDB locus_tag CELE_Y51A2A.1
        Panther gene CAEEL|WormBase=WBGene00013058|UniProtKB=Q9XWQ0
          family PTHR23124
        NCBI gene 190117
        RefSeq protein NM_075176.6
        TREEFAM TREEFAM_ID TF315870
        TrEMBL UniProtAcc Q9XWQ0
        UniProt_GCRP UniProtAcc Q9XWQ0
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:54 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 09 Oct 2007 15:40:27 WBPerson2970 Name_change: CGC_name: clec-247
        3 22 Feb 2008 08:58:42 WBPerson4025 Event: Split_into: WBGene00077645
        4 23 Jul 2009 15:38:39 WBPerson4025 Event: Acquires_merge: WBGene00077645
      Acquires_merge: WBGene00077645
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: clec
    Allele: WBVar00485332
      WBVar00485333
      WBVar00485334
      WBVar00485335
      WBVar00485336
      WBVar00091256
      WBVar00485337
      WBVar00485338
      WBVar01499709
      WBVar00057233
      WBVar00057238
      WBVar00057243
      WBVar00057248
      WBVar01875364
      WBVar01899788
      WBVar01899789
      WBVar01782088
      WBVar01782089
      WBVar01782090
      WBVar01897227
      WBVar01782091
      WBVar01782092
      WBVar02124140
      WBVar01496804
      WBVar01499566
      WBVar00596620
      WBVar00596623
      WBVar00256575
      WBVar00599004
      WBVar02122870
      WBVar01829190
      WBVar01543192
      WBVar00091143
      WBVar01521550
      WBVar01521551
      WBVar01521552
      WBVar02121045
      WBVar01521553
      WBVar01521554
      WBVar01521555
      WBVar01521556
      WBVar01813327
      WBVar01521557
      WBVar01813328
      WBVar02120865
      WBVar01813329
      WBVar01813330
      WBVar01813331
      WBVar01813332
      WBVar01813333
      WBVar02076658
      WBVar01813334
      WBVar01813335
      WBVar01813336
      WBVar01813337
      WBVar01813338
      WBVar01813339
      WBVar01813340
      WBVar01813341
      WBVar01813342
      WBVar01813343
      WBVar01924835
      WBVar00299003
      WBVar02120524
      WBVar00224063
      WBVar00264914
      WBVar01499446
      WBVar02025331
      WBVar02120716
      WBVar01749414
      WBVar01749415
      WBVar01749416
      WBVar01749417
      WBVar01749418
      WBVar01498549
      WBVar01845812
      WBVar01845813
      WBVar01845814
      WBVar01499840
      WBVar01499841
      WBVar02121660
      WBVar02123317
      WBVar02074855
      WBVar01092390
      WBVar01499299
      WBVar01092391
      WBVar01092392
      WBVar01092393
      WBVar01092394
      WBVar02124434
      WBVar01092395
      WBVar01092396
      WBVar01092397
      WBVar01092398
      WBVar01092399
      WBVar01092400
      WBVar02121311
      WBVar01977472
      WBVar01092401
      WBVar01092402
      WBVar01092403
      WBVar01092404
      WBVar01092405
      WBVar01092406
      WBVar02122973
      WBVar01092407
      WBVar01092408
      WBVar01092409
      WBVar01092410
      WBVar01092411
      WBVar01092412
      WBVar01092413
      WBVar02148215
      WBVar01092414
      WBVar01092415
      WBVar01092416
      WBVar02123536
      WBVar01498957
      WBVar01092417
      WBVar01092418
      WBVar00485326
      WBVar00485327
      WBVar00485328
      WBVar02124275
      WBVar00485329
      WBVar00485330
      WBVar00485331
    RNASeq_FPKM (74)
    Ortholog (95)
    Paralog (126)
    Structured_description: Automated_description: Enriched in NSM based on tiling array studies. Is affected by several genes including daf-2; rrf-3; and lin-4 based on microarray and RNA-seq studies. Is affected by four chemicals including glycine; Cry5B; and Chlorpyrifos based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: C-type lectin-like/link domain superfamily; Lectin C-type domain; C-type lectin-like; and C-type lectin fold. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: Y51A2A.1
    Corresponding_CDS_history: Y51A2A.1:wp188
      Y51A2A.1:wp205
      Y51A2A.1:wp235
    Corresponding_transcript: Y51A2A.1.1
  Experimental_info: RNAi_result: WBRNAi00020853 Inferred_automatically: RNAi_primary
      WBRNAi00057111 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1021534
      Expr1160557
      Expr2028389
    Microarray_results: SMD_Y51A2A.1
      183905_at
      Aff_Y51A2A.1
      GPL14144_Y51A2A.1_229-288_0.942_4_A
      GPL3518_CE20273
      GPL8304_CE_WBGene00013058_A
      GPL8673_Y51A2A_1P00226
      GPL9450_Y51A2A.1
      cea2.i.47597
    Expression_cluster (82)
    Interaction (66)
  Map_info: Map: V Position: 15.0577 Error: 0.051991
    Positive: Positive_clone: Y51A2A Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene