WormBase Tree Display for Gene: WBGene00015743

WBGene00015743 SMap: S_parent: Sequence: C13F10
  Identity: Version: 2
    Name: CGC_name: soap-1 Person_evidence: WBPerson1963
      Sequence_name: C13F10.4
      Molecular_name: C13F10.4
        C13F10.4.1
        CE08145
      Other_name: CELE_C13F10.4 Accession_evidence: NDB BX284605
      Public_name: soap-1
    DB_info: Database: AceView gene 5H686
        WormQTL gene WBGene00015743
        WormFlux gene WBGene00015743
        NDB locus_tag CELE_C13F10.4
        Panther gene CAEEL|WormBase=WBGene00015743|UniProtKB=O01485
          family PTHR21663
        NCBI gene 179109
        RefSeq protein NM_072427.6
        TREEFAM TREEFAM_ID TF300706
        TrEMBL UniProtAcc O01485
        UniProt_GCRP UniProtAcc O01485
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:56 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 20 May 2014 11:44:19 WBPerson2970 Name_change: CGC_name: soap-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: soap
    Allele: WBVar01340059
      WBVar01484250
      WBVar01588562
      WBVar00316825
      WBVar00211187
      WBVar02071179
      WBVar00211188
      WBVar00211189
      WBVar00211190
      WBVar00211191
      WBVar00211192
      WBVar01023422
      WBVar01023423
      WBVar01023424
      WBVar01023425
      WBVar01023426
      WBVar01023427
      WBVar01023428
      WBVar01023429
      WBVar01023430
      WBVar01499740
      WBVar01023431
      WBVar01023432
      WBVar01023433
      WBVar01023434
      WBVar01023435
      WBVar01023436
      WBVar01023437
      WBVar01023438
      WBVar01023439
      WBVar01023440
      WBVar01023441
      WBVar01023442
      WBVar01023443
      WBVar01023444
      WBVar01023445
      WBVar01023446
      WBVar01023447
      WBVar01023448
      WBVar00094312
      WBVar01023449
      WBVar00257131
      WBVar00257132
      WBVar01023450
      WBVar01023451
      WBVar01500129
      WBVar01023452
      WBVar01023453
      WBVar01023454
      WBVar01023455
      WBVar02068807
      WBVar01023456
      WBVar01023457
      WBVar01023458
      WBVar01023459
      WBVar01023460
      WBVar01023461
      WBVar01023462
      WBVar01023463
      WBVar01023464
      WBVar01023465
      WBVar01023466
      WBVar01023467
      WBVar01460501
      WBVar01023468
      WBVar01023469
      WBVar01023470
      WBVar01023471
      WBVar01023472
      WBVar01741093
      WBVar01023473
      WBVar01023474
      WBVar01741094
      WBVar01023475
      WBVar01741095
      WBVar01023476
      WBVar01741096
      WBVar01741097
      WBVar01023477
      WBVar01023478
      WBVar01741098
      WBVar01741099
      WBVar01023479
      WBVar01023480
      WBVar01741100
      WBVar01023481
      WBVar01499056
      WBVar01974038
      WBVar00604065
      WBVar01974039
      WBVar01974040
      WBVar00302207
      WBVar02136594
      WBVar02136595
      WBVar00462112
      WBVar00462113
      WBVar00462114
      WBVar00462115
      WBVar00462116
      WBVar00462117
      WBVar00462118
      WBVar00462119
      WBVar01689634
      WBVar00462120
      WBVar00462121
      WBVar00462122
      WBVar00462123
      WBVar00462124
      WBVar00462125
      WBVar02023905
      WBVar02034581
      WBVar00462126
      WBVar00462127
      WBVar02023906
      WBVar01494158
      WBVar02023907
      WBVar01499496
      WBVar00462128
      WBVar02023908
      WBVar00462129
      WBVar02023909
      WBVar02023910
      WBVar01499316
      WBVar02023911
      WBVar02023912
      WBVar02023913
      WBVar01894373
      WBVar00309226
      WBVar01500066
    Strain: WBStrain00001229
      WBStrain00001480
      WBStrain00037397
    RNASeq_FPKM (74)
    GO_annotation: 00024746
      00024747
      00024748
      00024749
      00024750
      00024751
      00024752
    Contained_in_operon: CEOP5144
    Ortholog (50)
    Structured_description: Automated_description: Involved in apical protein localization. Predicted to be located in endocytic vesicle. Is an ortholog of human HEATR5A (HEAT repeat containing 5A) and HEATR5B (HEAT repeat containing 5B). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C13F10.4
    Corresponding_transcript: C13F10.4.1
    Other_sequence (30)
    Associated_feature: WBsf233921
  Experimental_info: RNAi_result: WBRNAi00040448 Inferred_automatically: RNAi_primary
      WBRNAi00008385 Inferred_automatically: RNAi_primary
      WBRNAi00024545 Inferred_automatically: RNAi_primary
      WBRNAi00071541 Inferred_automatically: RNAi_primary
      WBRNAi00103186 Inferred_automatically: RNAi_primary
      WBRNAi00071677 Inferred_automatically: RNAi_primary
      WBRNAi00002372 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr5257
      Expr5258
      Expr1016218
      Expr1036735
      Expr1144515
      Expr2015991
      Expr2034226
    Drives_construct: WBCnstr00002121
      WBCnstr00028603
    Construct_product: WBCnstr00016472
      WBCnstr00028603
    Microarray_results (20)
    Expression_cluster (96)
    Interaction (37)
  Map_info: Map: V Position: 0.633074
    Positive: Positive_clone: C13F10 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00031006
    WBPaper00032078
    WBPaper00038491
    WBPaper00046645
    WBPaper00055090
    WBPaper00064898
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene