WormBase Tree Display for Gene: WBGene00015819
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| WBGene00015819 | SMap | S_parent | Sequence | C16A11 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | |||||||
| Name | CGC_name | fbxc-44 | Person_evidence | WBPerson655 | |||||
| Sequence_name | C16A11.6 | ||||||||
| Molecular_name | C16A11.6 | ||||||||
| C16A11.6.1 | |||||||||
| CE40739 | |||||||||
| Other_name | CELE_C16A11.6 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | fbxc-44 | ||||||||
| DB_info | Database | AceView | gene | 2E526 | |||||
| WormQTL | gene | WBGene00015819 | |||||||
| WormFlux | gene | WBGene00015819 | |||||||
| NDB | locus_tag | CELE_C16A11.6 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00015819|UniProtKB=A3KFE6 | |||||||
| family | PTHR31379 | ||||||||
| NCBI | gene | 173757 | |||||||
| RefSeq | protein | NM_062345.5 | |||||||
| TREEFAM | TREEFAM_ID | TF322125 | |||||||
| TrEMBL | UniProtAcc | A3KFE6 | |||||||
| UniProt_GCRP | UniProtAcc | A3KFE6 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:56 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 28 Feb 2007 15:40:24 | WBPerson1867 | Event | Split_into | WBGene00045297 | ||||
| 3 | 17 Jun 2008 14:44:53 | WBPerson2970 | Name_change | CGC_name | fbxc-44 | ||||
| Split_into | WBGene00045297 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | fbxc | ||||||||
| Allele | WBVar01499702 | ||||||||
| WBVar01498435 | |||||||||
| WBVar00724541 | |||||||||
| WBVar00724542 | |||||||||
| WBVar00724543 | |||||||||
| WBVar00724544 | |||||||||
| WBVar01626411 | |||||||||
| WBVar01626412 | |||||||||
| WBVar00724545 | |||||||||
| WBVar01626413 | |||||||||
| WBVar00724546 | |||||||||
| WBVar00724547 | |||||||||
| WBVar00724548 | |||||||||
| WBVar00363579 | |||||||||
| WBVar00724549 | |||||||||
| WBVar00363580 | |||||||||
| WBVar00363581 | |||||||||
| WBVar01504909 | |||||||||
| WBVar00724550 | |||||||||
| WBVar00724551 | |||||||||
| WBVar00363582 | |||||||||
| WBVar00724552 | |||||||||
| WBVar00363583 | |||||||||
| WBVar00363584 | |||||||||
| WBVar01559277 | |||||||||
| WBVar01247263 | |||||||||
| WBVar01305179 | |||||||||
| WBVar01477345 | |||||||||
| WBVar00146298 | |||||||||
| WBVar01766264 | |||||||||
| Strain | WBStrain00037981 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog | chrII_pilon.g4205 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| Paralog (33) | |||||||||
| Structured_description | Automated_description | Enriched in several structures, including ADE sheath cell; AFD; RIC; germ line; and head mesodermal cell based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-2; elt-2; and sir-2.1 based on microarray and RNA-seq studies. Is affected by ten chemicals including rotenone; manganese chloride; and Zidovudine based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domain: Protein of unknown function DUF3557. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C16A11.6 | |||||||
| Corresponding_CDS_history | C16A11.6:wp124 | ||||||||
| C16A11.6:wp172 | |||||||||
| Corresponding_transcript | C16A11.6.1 | ||||||||
| Associated_feature | WBsf222907 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00040648 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00010812 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00103191 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00007816 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1015839 | ||||||||
| Expr1036774 | |||||||||
| Expr1144701 | |||||||||
| Expr2011728 | |||||||||
| Expr2029967 | |||||||||
| Drives_construct | WBCnstr00028542 | ||||||||
| Construct_product | WBCnstr00028542 | ||||||||
| Microarray_results | SMD_C16A11.6 | ||||||||
| A_12_P151665 | |||||||||
| A_12_P151666 | |||||||||
| GPL13394_WBGene00015819 | |||||||||
| GPL13914_C16A11.6 | |||||||||
| GPL14144_C16A11.6_279-338_0.801_83_A | |||||||||
| GPL19516_CGZ0004823 | |||||||||
| GPL21109_C16A11.6 | |||||||||
| GPL8673_C16A11_6P00322 | |||||||||
| GPL8673_C16A11_6P00524 | |||||||||
| Expression_cluster (102) | |||||||||
| Interaction (218) | |||||||||
| Map_info | Map | II | Position | -5.08599 | Error | 0.032232 | |||
| Positive | Positive_clone | C16A11 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
