WormBase Tree Display for Gene: WBGene00016601
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| WBGene00016601 | SMap | S_parent | Sequence | CHROMOSOME_I | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | |||||||
| Name | CGC_name | acin-1 | Person_evidence | WBPerson9844 | |||||
| Sequence_name | C43E11.1 | ||||||||
| Molecular_name | C43E11.1 | ||||||||
| C43E11.1.1 | |||||||||
| CE23592 | |||||||||
| Other_name | CELE_C43E11.1 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | acin-1 | ||||||||
| DB_info | Database | AceView | gene | 1E841 | |||||
| WormQTL | gene | WBGene00016601 | |||||||
| WormFlux | gene | WBGene00016601 | |||||||
| NDB | locus_tag | CELE_C43E11.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00016601|UniProtKB=P91156 | |||||||
| family | PTHR46589 | ||||||||
| NCBI | gene | 172030 | |||||||
| RefSeq | protein | NM_058943.7 | |||||||
| TREEFAM | TREEFAM_ID | TF320727 | |||||||
| TrEMBL | UniProtAcc | P91156 | |||||||
| UniProt_GCRP | UniProtAcc | P91156 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:57 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 16 Jan 2006 17:09:08 | WBPerson2970 | Name_change | CGC_name | cogc-5 | ||||
| 3 | 05 Aug 2009 09:22:32 | WBPerson9133 | Name_change | CGC_name | acin-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | acin | ||||||||
| Allele | WBVar00152932 | ||||||||
| WBVar01762310 | |||||||||
| WBVar00043476 | |||||||||
| WBVar01499919 | |||||||||
| WBVar01281760 | |||||||||
| WBVar01281761 | |||||||||
| WBVar01281763 | |||||||||
| WBVar01281764 | |||||||||
| WBVar01281765 | |||||||||
| WBVar02151302 | |||||||||
| WBVar01956885 | |||||||||
| WBVar01489293 | |||||||||
| WBVar01499786 | |||||||||
| WBVar00631391 | |||||||||
| WBVar00631392 | |||||||||
| WBVar00631393 | |||||||||
| WBVar00631394 | |||||||||
| WBVar00631395 | |||||||||
| WBVar00631396 | |||||||||
| WBVar00631397 | |||||||||
| WBVar00631398 | |||||||||
| WBVar01499985 | |||||||||
| WBVar00631399 | |||||||||
| WBVar00631400 | |||||||||
| WBVar00631401 | |||||||||
| WBVar00631402 | |||||||||
| WBVar00631403 | |||||||||
| WBVar00631404 | |||||||||
| WBVar00631405 | |||||||||
| WBVar00631406 | |||||||||
| WBVar00631407 | |||||||||
| WBVar02151165 | |||||||||
| WBVar00631408 | |||||||||
| WBVar00631409 | |||||||||
| WBVar00631410 | |||||||||
| WBVar00332180 | |||||||||
| WBVar00332181 | |||||||||
| WBVar00332182 | |||||||||
| WBVar00332183 | |||||||||
| WBVar00332184 | |||||||||
| WBVar00332185 | |||||||||
| WBVar00332186 | |||||||||
| WBVar00332187 | |||||||||
| WBVar00332188 | |||||||||
| WBVar00332189 | |||||||||
| WBVar02150668 | |||||||||
| WBVar01411506 | |||||||||
| WBVar01411507 | |||||||||
| WBVar01498959 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00050174 | ||||||||
| 00050175 | |||||||||
| 00050176 | |||||||||
| 00050177 | |||||||||
| 00050178 | |||||||||
| 00050179 | |||||||||
| 00122173 | |||||||||
| 00122174 | |||||||||
| Ortholog (33) | |||||||||
| Structured_description | Concise_description | acin-1 encodes an ortholog of human ACIN1 (OMIM:604562, which induces apoptotic chromatin condensation) and Drosophila HOOK-LIKE. | Curator_confirmed | WBPerson567 | |||||
| Date_last_updated | 18 Aug 2009 00:00:00 | ||||||||
| Automated_description | Predicted to enable RNA binding activity. Involved in gonad morphogenesis and regulation of cell migration. Predicted to be part of ASAP complex. Is an ortholog of human ACIN1 (apoptotic chromatin condensation inducer 1). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C43E11.1 | |||||||
| Corresponding_transcript | C43E11.1.1 | ||||||||
| Other_sequence (17) | |||||||||
| Associated_feature | WBsf643201 | ||||||||
| WBsf656191 | |||||||||
| WBsf983371 | |||||||||
| WBsf983372 | |||||||||
| WBsf217515 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00007770 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00042378 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00001524 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00003137 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00020715 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00029757 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00116603 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1023756 | ||||||||
| Expr1037127 | |||||||||
| Expr1146366 | |||||||||
| Expr2009147 | |||||||||
| Expr2027384 | |||||||||
| Microarray_results (21) | |||||||||
| Expression_cluster (85) | |||||||||
| Interaction (32) | |||||||||
| Map_info | Map | I | Position | -1.51036 | Error | 0.002556 | |||
| Positive | Positive_clone | C43E11 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| WBPaper00064064 | |||||||||
| WBPaper00064339 | |||||||||
| Remark | C43E11.1 was originally assigned in error to cogc-5. | Paper_evidence | WBPaper00026979 | ||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
