WormBase Tree Display for Gene: WBGene00020363

WBGene00020363 SMap: S_parent: Sequence: T08E11
  Identity: Version: 2
    Name: CGC_name: fbxa-3 Person_evidence: WBPerson655
      Sequence_name: T08E11.7
      Molecular_name: T08E11.7
        T08E11.7.1
        CE39399
      Other_name: CELE_T08E11.7 Accession_evidence: NDB BX284602
      Public_name: fbxa-3
    DB_info: Database: AceView gene 2C106
        WormQTL gene WBGene00020363
        WormFlux gene WBGene00020363
        NDB locus_tag CELE_T08E11.7
        Panther gene CAEEL|WormBase=WBGene00020363|UniProtKB=O76638
          family PTHR23015
        NCBI gene 188289
        RefSeq protein NM_061683.4
        TREEFAM TREEFAM_ID TF322006
        TrEMBL UniProtAcc O76638
        UniProt_GCRP UniProtAcc O76638
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:03 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 12 Dec 2005 15:18:56 WBPerson2970 Name_change: CGC_name: fbxa-3
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: fbxa
    Allele: WBVar01495651
      WBVar01575643
      WBVar01575644
      WBVar01499702
      WBVar02120604
      WBVar02123182
      WBVar02123007
      WBVar02121537
      WBVar02101846
      WBVar01361669
      WBVar02101847
      WBVar01361672
      WBVar02122097
      WBVar01500106
      WBVar01898330
      WBVar01898331
      WBVar02108493
      WBVar02124326
      WBVar02088994
      WBVar02088995
      WBVar00236198
      WBVar02088996
      WBVar00236199
      WBVar00165546
      WBVar00165547
      WBVar00165548
      WBVar00165549
      WBVar00165550
      WBVar02121946
      WBVar00165551
      WBVar01683434
      WBVar00165552
      WBVar00165553
      WBVar01683435
      WBVar00165554
      WBVar01624582
      WBVar01683436
      WBVar00165555
      WBVar01624583
      WBVar01683437
      WBVar00165556
      WBVar01683438
      WBVar00165557
      WBVar01683439
      WBVar00165558
      WBVar01683440
      WBVar01683441
      WBVar00165559
      WBVar00165560
      WBVar01912014
      WBVar01683442
      WBVar01891450
      WBVar00165561
      WBVar01683443
      WBVar00165562
      WBVar01683444
      WBVar01891451
      WBVar01683445
      WBVar00165563
      WBVar01683446
      WBVar00165564
      WBVar01683447
      WBVar02102819
      WBVar00165565
      WBVar01683448
      WBVar00165566
      WBVar02102820
      WBVar00165567
      WBVar01683449
      WBVar02099141
      WBVar02102821
      WBVar02102822
      WBVar02099142
      WBVar00165568
      WBVar01683450
      WBVar02099143
      WBVar02102823
      WBVar01683451
      WBVar00165569
      WBVar01683452
      WBVar00165570
      WBVar02099144
      WBVar01683453
      WBVar00165571
      WBVar02124543
      WBVar01683454
      WBVar00165572
      WBVar01683455
      WBVar01683456
      WBVar01683457
      WBVar01683458
      WBVar02122524
      WBVar01683459
      WBVar01534864
      WBVar01534865
      WBVar01534866
      WBVar01534867
      WBVar01534868
      WBVar01534869
      WBVar01534870
      WBVar01534871
      WBVar01534872
      WBVar01534873
      WBVar02080212
      WBVar02118122
      WBVar01717434
      WBVar02118859
      WBVar01959272
      WBVar01717435
      WBVar01717436
      WBVar00357923
      WBVar01959273
      WBVar00357924
      WBVar01717437
      WBVar01717438
      WBVar00357925
      WBVar01717439
      WBVar00357926
      WBVar01717440
      WBVar01717441
      WBVar01717442
      WBVar01717443
      WBVar01717444
      WBVar01717445
      WBVar01717446
      WBVar00091181
      WBVar01717447
      WBVar01717448
      WBVar01717449
      WBVar02106186
      WBVar02106187
      WBVar02106188
      WBVar02106189
      WBVar02106190
      WBVar01240629
      WBVar01546234
      WBVar02084306
      WBVar01546235
      WBVar01546236
      WBVar02122773
      WBVar00042416
      WBVar00042421
      WBVar01822984
      WBVar01575615
      WBVar00042426
      WBVar02121124
      WBVar01575616
      WBVar01575617
      WBVar01788878
      WBVar00707888
      WBVar01575618
      WBVar01788879
      WBVar01788880
      WBVar00707889
      WBVar01575619
      WBVar00707890
      WBVar01575620
      WBVar00707891
      WBVar01575621
      WBVar01988804
      WBVar01575622
      WBVar00707892
      WBVar01575623
      WBVar00707893
      WBVar00707894
      WBVar01575624
      WBVar01705142
      WBVar00707895
      WBVar01575625
      WBVar01705143
      WBVar00707896
      WBVar01575626
      WBVar01705144
      WBVar01575627
      WBVar01705145
      WBVar00707897
      WBVar01575628
      WBVar00707898
      WBVar01575629
      WBVar00707899
      WBVar00707900
      WBVar01575630
      WBVar00707901
      WBVar01575631
      WBVar00091057
      WBVar00707902
      WBVar01575632
      WBVar01575633
      WBVar00707903
      WBVar01575634
      WBVar00707904
      WBVar00707905
      WBVar01575635
      WBVar01575636
      WBVar00707906
      WBVar00707907
      WBVar02122433
      WBVar01575637
      WBVar02120776
      WBVar01575638
      WBVar01575639
      WBVar01575640
      WBVar01575641
      WBVar01575642
    RNASeq_FPKM (74)
    Ortholog (40)
    Paralog (225)
    Structured_description: Concise_description: This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; this gene's encoded protein also contains an FTH/DUF38 motif, which may also mediate protein-protein interaction. Paper_evidence: WBPaper00012854
          Curator_confirmed: WBPerson567
          Date_last_updated: 17 Jun 2004 00:00:00
      Automated_description: Enriched in several structures, including ABalaaaarl; ABalaaaarr; MSpaapaa; coelomocyte; and neurons based on microarray; tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including skn-1; glp-1; and hsf-1 based on microarray and RNA-seq studies. Is affected by twelve chemicals including methylmercuric chloride; Sodium Chloride; and Rifampin based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: F-box domain; Domain of unknown function DUF38/FTH, Caenorhabditis species; FTH domain; and F-box A protein FB224. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: T08E11.7
    Corresponding_CDS_history: T08E11.7:wp151
    Corresponding_transcript: T08E11.7.1
    Associated_feature: WBsf649899
      WBsf649900
      WBsf655349
      WBsf986826
      WBsf1011639
  Experimental_info: RNAi_result: WBRNAi00052877 Inferred_automatically: RNAi_primary
      WBRNAi00103517 Inferred_automatically: RNAi_primary
      WBRNAi00018452 Inferred_automatically: RNAi_primary
      WBRNAi00103516 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1013492
      Expr1156475
      Expr2011543
      Expr2029780
    Drives_construct: WBCnstr00025190
    Construct_product: WBCnstr00025190
    Microarray_results (15)
    Expression_cluster (158)
    Interaction: WBInteraction000190769
      WBInteraction000348909
  Map_info: Map: II Position: -14.3663 Error: 0.003655
    Positive: Positive_clone: T08E11 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00012854
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene