WormBase Tree Display for Gene: WBGene00020451
expand all nodes | collapse all nodes | view schema
| WBGene00020451 | SMap | S_parent | Sequence | T12B5 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | fbxa-11 | Person_evidence | WBPerson655 | |||||
| Sequence_name | T12B5.4 | ||||||||
| Molecular_name | T12B5.4 | ||||||||
| T12B5.4.1 | |||||||||
| CE20062 | |||||||||
| Other_name | CELE_T12B5.4 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | fbxa-11 | ||||||||
| DB_info | Database | AceView | gene | 3B569 | |||||
| WormQTL | gene | WBGene00020451 | |||||||
| WormFlux | gene | WBGene00020451 | |||||||
| NDB | locus_tag | CELE_T12B5.4 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00020451|UniProtKB=Q9TZ23 | |||||||
| family | PTHR23015 | ||||||||
| NCBI | gene | 188443 | |||||||
| RefSeq | protein | NM_064902.2 | |||||||
| TREEFAM | TREEFAM_ID | TF322006 | |||||||
| TrEMBL | UniProtAcc | Q9TZ23 | |||||||
| UniProt_GCRP | UniProtAcc | Q9TZ23 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:03 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 12 Dec 2005 15:18:56 | WBPerson2970 | Name_change | CGC_name | fbxa-11 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | fbxa | ||||||||
| Allele | WBVar01903634 | ||||||||
| WBVar02122810 | |||||||||
| WBVar02124101 | |||||||||
| WBVar02121158 | |||||||||
| WBVar02122453 | |||||||||
| WBVar00007966 | |||||||||
| WBVar01500082 | |||||||||
| WBVar00007971 | |||||||||
| WBVar02120984 | |||||||||
| WBVar02123377 | |||||||||
| WBVar00007976 | |||||||||
| WBVar00007981 | |||||||||
| WBVar01577878 | |||||||||
| WBVar00007986 | |||||||||
| WBVar02099462 | |||||||||
| WBVar00007991 | |||||||||
| WBVar02123578 | |||||||||
| WBVar01627692 | |||||||||
| WBVar01499552 | |||||||||
| WBVar01540551 | |||||||||
| WBVar02124686 | |||||||||
| WBVar02121742 | |||||||||
| WBVar02123217 | |||||||||
| WBVar01606515 | |||||||||
| WBVar01606516 | |||||||||
| WBVar02101318 | |||||||||
| WBVar01606517 | |||||||||
| WBVar02122116 | |||||||||
| WBVar01606518 | |||||||||
| WBVar01606519 | |||||||||
| WBVar02120832 | |||||||||
| WBVar01785062 | |||||||||
| WBVar01498832 | |||||||||
| WBVar00388971 | |||||||||
| WBVar00388972 | |||||||||
| WBVar00388973 | |||||||||
| WBVar00388974 | |||||||||
| WBVar02120474 | |||||||||
| WBVar02124343 | |||||||||
| WBVar02121583 | |||||||||
| WBVar00095537 | |||||||||
| WBVar00095538 | |||||||||
| WBVar00095540 | |||||||||
| WBVar02120666 | |||||||||
| WBVar00095541 | |||||||||
| WBVar02121404 | |||||||||
| WBVar02124181 | |||||||||
| WBVar02121974 | |||||||||
| WBVar00800494 | |||||||||
| WBVar00800495 | |||||||||
| WBVar01802290 | |||||||||
| WBVar00800496 | |||||||||
| WBVar01802291 | |||||||||
| WBVar00800497 | |||||||||
| WBVar00800498 | |||||||||
| WBVar00800499 | |||||||||
| WBVar00800500 | |||||||||
| WBVar00800501 | |||||||||
| WBVar00800502 | |||||||||
| WBVar00800503 | |||||||||
| WBVar00800504 | |||||||||
| WBVar00800505 | |||||||||
| WBVar01655613 | |||||||||
| WBVar00800506 | |||||||||
| WBVar02092358 | |||||||||
| WBVar02092359 | |||||||||
| WBVar01912607 | |||||||||
| WBVar01912608 | |||||||||
| WBVar01692163 | |||||||||
| WBVar01908361 | |||||||||
| WBVar02122375 | |||||||||
| WBVar02122559 | |||||||||
| WBVar02124401 | |||||||||
| WBVar02124954 | |||||||||
| WBVar02122933 | |||||||||
| WBVar02123672 | |||||||||
| WBVar02124779 | |||||||||
| WBVar01506295 | |||||||||
| WBVar01506296 | |||||||||
| WBVar01506297 | |||||||||
| WBVar00091206 | |||||||||
| WBVar01506298 | |||||||||
| WBVar01506299 | |||||||||
| WBVar01506300 | |||||||||
| WBVar01685937 | |||||||||
| WBVar01506301 | |||||||||
| WBVar01506302 | |||||||||
| WBVar01506303 | |||||||||
| WBVar01506304 | |||||||||
| WBVar01506305 | |||||||||
| WBVar01667129 | |||||||||
| WBVar01322902 | |||||||||
| WBVar01506306 | |||||||||
| WBVar01322905 | |||||||||
| WBVar01506307 | |||||||||
| WBVar01506308 | |||||||||
| WBVar01322908 | |||||||||
| WBVar01506309 | |||||||||
| WBVar01322909 | |||||||||
| WBVar01322910 | |||||||||
| WBVar01506310 | |||||||||
| WBVar01322912 | |||||||||
| WBVar01506311 | |||||||||
| WBVar01322913 | |||||||||
| WBVar01506312 | |||||||||
| WBVar01506313 | |||||||||
| WBVar01255570 | |||||||||
| WBVar01322914 | |||||||||
| WBVar01255571 | |||||||||
| WBVar01255572 | |||||||||
| WBVar01769494 | |||||||||
| WBVar01255575 | |||||||||
| WBVar01769495 | |||||||||
| WBVar01769496 | |||||||||
| WBVar01255577 | |||||||||
| WBVar01769497 | |||||||||
| WBVar01255578 | |||||||||
| WBVar01769498 | |||||||||
| WBVar01255579 | |||||||||
| WBVar01255580 | |||||||||
| WBVar01769499 | |||||||||
| WBVar01769500 | |||||||||
| WBVar01255581 | |||||||||
| WBVar02121865 | |||||||||
| WBVar01769501 | |||||||||
| WBVar01255583 | |||||||||
| WBVar01769502 | |||||||||
| WBVar01769503 | |||||||||
| WBVar01700521 | |||||||||
| WBVar01700522 | |||||||||
| WBVar01769504 | |||||||||
| WBVar01769505 | |||||||||
| WBVar01700523 | |||||||||
| WBVar01769506 | |||||||||
| WBVar01700524 | |||||||||
| WBVar01769507 | |||||||||
| WBVar01700525 | |||||||||
| WBVar01700526 | |||||||||
| WBVar01700527 | |||||||||
| WBVar01706449 | |||||||||
| WBVar02123898 | |||||||||
| WBVar01706450 | |||||||||
| WBVar01700528 | |||||||||
| WBVar02106791 | |||||||||
| WBVar02081397 | |||||||||
| WBVar02081398 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (29) | |||||||||
| Paralog (225) | |||||||||
| Structured_description | Concise_description | This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; this gene's encoded protein also contains an FTH/DUF38 motif, which may also mediate protein-protein interaction. | Paper_evidence | WBPaper00012854 | |||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Enriched in AVE; Z1.p; Z4.a; body wall muscle cell; and male distal tip cell based on tiling array and RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray and RNA-seq studies. Is affected by Cry5B and bortezomib based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: F-box domain; Domain of unknown function DUF38/FTH, Caenorhabditis species; FTH domain; and F-box A protein FB224. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T12B5.4 | |||||||
| Corresponding_transcript | T12B5.4.1 | ||||||||
| Associated_feature | WBsf644935 | ||||||||
| WBsf224419 | |||||||||
| WBsf224420 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00007118 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00053188 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00053186 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00007149 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00006598 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00018632 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00035505 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00053185 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1026133 | ||||||||
| Expr1156780 | |||||||||
| Expr2011464 | |||||||||
| Expr2029702 | |||||||||
| Drives_construct | WBCnstr00025129 | ||||||||
| Construct_product | WBCnstr00025129 | ||||||||
| Microarray_results (17) | |||||||||
| Expression_cluster (123) | |||||||||
| Interaction | WBInteraction000030756 | ||||||||
| WBInteraction000291995 | |||||||||
| Map_info | Map | III | Position | -24.9766 | Error | 0.011611 | |||
| Positive | Positive_clone | T12B5 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00012854 | ||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
