WormBase Tree Display for Gene: WBGene00021075

WBGene00021075 SMap: S_parent: Sequence: W07E6
  Identity: Version: 2
    Name: CGC_name: sms-5 Paper_evidence: WBPaper00057293
          Person_evidence: WBPerson1820
          Author_evidence
      Sequence_name: W07E6.3
      Molecular_name: W07E6.3b
        W07E6.3b.1
        CE49035
        W07E6.3c
        CE48509
        W07E6.3c.1
      Other_name: CELE_W07E6.3 Accession_evidence: NDB BX284602
      Public_name: sms-5
    DB_info: Database (11)
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:04 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 11 Dec 2018 16:50:34 WBPerson1983 Name_change: CGC_name: sms-5,
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: sms
    Allele: WBVar00093634 Inferred_automatically: From strain object: RB1919
      WBVar00009786
      WBVar01499702
      WBVar02123179
      WBVar02124668
      WBVar00699111
      WBVar01500106
      WBVar00699112
      WBVar01665162
      WBVar00699113
      WBVar01715532
      WBVar00699114
      WBVar00699115
      WBVar01237596
      WBVar00699116
      WBVar00699117
      WBVar00699118
      WBVar01291899
      WBVar00699119
      WBVar00699120
      WBVar01291902
      WBVar00699121
      WBVar00699122
      WBVar00699123
      WBVar00699124
      WBVar00699125
      WBVar00699126
      WBVar00699127
      WBVar00699128
      WBVar01435410
      WBVar00095733
      WBVar00095734
      WBVar01623119
      WBVar01623120
      WBVar02124538
      WBVar00354952
      WBVar02124539
      WBVar00354953
      WBVar00354954
      WBVar02122518
      WBVar00354955
      WBVar02122519
      WBVar00354956
      WBVar00354957
      WBVar00354958
      WBVar00354959
      WBVar00354960
      WBVar00354961
      WBVar02109642
      WBVar00251469
      WBVar01357964
      WBVar00163148
      WBVar00163149
      WBVar01499463
      WBVar01476837
      WBVar00543731
      WBVar01682234
      WBVar01932906
      WBVar02121116
      WBVar02075792
      WBVar00009751
      WBVar01826498
      WBVar00009756
      WBVar00009761
      WBVar02006547
      WBVar02017233
      WBVar02120586
      WBVar00009766
      WBVar01532556
      WBVar00009771
      WBVar01532557
      WBVar01532558
      WBVar00009776
      WBVar00009781
    Strain: WBStrain00032604
    RNASeq_FPKM (74)
    GO_annotation (13)
    Ortholog (31)
    Paralog: WBGene00004892 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00004893 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00004894 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00018735 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
    Structured_description: Automated_description: Predicted to enable ceramide cholinephosphotransferase activity and sphingomyelin synthase activity. Predicted to be involved in ceramide biosynthetic process and sphingomyelin biosynthetic process. Predicted to be located in membrane. Expressed in marginal cell; pharyngeal muscle cell; pharynx; and spermatheca. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: W07E6.3b
      W07E6.3c
    Corresponding_CDS_history: W07E6.3a:wp250
    Corresponding_transcript: W07E6.3b.1
      W07E6.3c.1
    Other_sequence (192)
    Associated_feature: WBsf717621
      WBsf220759
  Experimental_info: RNAi_result: WBRNAi00054951 Inferred_automatically: RNAi_primary
      WBRNAi00019699 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr14868
      Expr14869
      Expr1019120
      Expr1158485
      Expr2006841
      Expr2025066
    Drives_construct: WBCnstr00024694
      WBCnstr00041565
    Construct_product: WBCnstr00024694
      WBCnstr00041565
    Microarray_results (24)
    Expression_cluster (99)
    Interaction: WBInteraction000423653
      WBInteraction000457506
  Map_info: Map: II Position: -15.6005
    Positive: Positive_clone: W07E6 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00038491
    WBPaper00055090
    WBPaper00057293
    WBPaper00060052
    WBPaper00061422
    WBPaper00063285
    WBPaper00066145
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene