WormBase Tree Display for Gene: WBGene00044621
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WBGene00044621 | SMap | S_parent | Sequence | F53B1 | ||
---|---|---|---|---|---|---|
Identity (6) | ||||||
Gene_info | Biotype | SO:0001217 | ||||
Gene_class | bus | |||||
Reference_allele | WBVar00144919 | |||||
Allele | WBVar00144919 | Inferred_automatically | From strain object: CB5612 | |||
WBVar00144932 | Inferred_automatically | From strain object: CB5614 | ||||
WBVar02148835 | Inferred_automatically | From strain object: CB6991 | ||||
From strain object: CB6992 | ||||||
From strain object: DC19 | ||||||
WBVar02148846 | Inferred_automatically | From strain object: CB7448 | ||||
WBVar00144930 | ||||||
WBVar00144935 | ||||||
WBVar00144917 | ||||||
WBVar00144916 | ||||||
WBVar00145006 | ||||||
WBVar00145001 | ||||||
WBVar02157997 | ||||||
WBVar01619199 | ||||||
WBVar01619200 | ||||||
WBVar01619201 | ||||||
WBVar00496050 | ||||||
WBVar00496051 | ||||||
WBVar00496052 | ||||||
WBVar00496053 | ||||||
WBVar01499751 | ||||||
WBVar01499636 | ||||||
WBVar00075758 | ||||||
WBVar01987270 | ||||||
WBVar01124450 | ||||||
WBVar01124451 | ||||||
WBVar01124452 | ||||||
WBVar01124453 | ||||||
WBVar01124454 | ||||||
WBVar01124455 | ||||||
WBVar01124456 | ||||||
WBVar01124457 | ||||||
WBVar01124458 | ||||||
WBVar01124459 | ||||||
WBVar01124460 | ||||||
WBVar01124461 | ||||||
WBVar01124462 | ||||||
WBVar01124463 | ||||||
WBVar01124464 | ||||||
Strain | WBStrain00004659 | |||||
WBStrain00004661 | ||||||
WBStrain00004730 | ||||||
WBStrain00004731 | ||||||
WBStrain00004762 | ||||||
WBStrain00005604 | ||||||
RNASeq_FPKM (74) | ||||||
Ortholog (30) | ||||||
Paralog (13) | ||||||
Structured_description | Concise_description | bus-5 is an uncloned gene required for colonization by Microbacterium nematophilum, the tail-swelling response to M. nematophilum infection, and for fully normal cuticle antigens and traction during movement; bus-5 is also strongly required for cuticle integrity and for long-term survival during starvation. | Paper_evidence | WBPaper00026735 | ||
WBPaper00029153 | ||||||
Curator_confirmed | WBPerson567 | |||||
Date_last_updated | 16 Jul 2007 00:00:00 | |||||
Automated_description | Expressed in hyp7 syncytium; hypodermal cell; and seam cell. Human ortholog(s) of this gene implicated in Catel Manzke syndrome. Is predicted to encode a protein with the following domains: NAD(P)-binding domain; NAD(P)-binding domain superfamily; and GDP-mannose 4,6 dehydratase. Is an ortholog of human TGDS (TDP-glucose 4,6-dehydratase). | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | |||||
WBPerson37462 | ||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
Date_last_updated | 29 Nov 2023 00:00:00 | |||||
Disease_info | Potential_model | DOID:0081122 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:20324) | |
Molecular_info | Corresponding_CDS | F53B1.4 | ||||
Corresponding_transcript | F53B1.4.1 | |||||
Other_sequence (57) | ||||||
Associated_feature | WBsf237051 | |||||
WBsf237052 | ||||||
Experimental_info | RNAi_result | WBRNAi00015469 | Inferred_automatically | RNAi_primary | ||
WBRNAi00032665 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00025578 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00048070 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00025577 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00027359 | Inferred_automatically | RNAi_primary | ||||
Expr_pattern | Expr15742 | |||||
Expr15743 | ||||||
Expr15744 | ||||||
Expr16442 | ||||||
Expr1014478 | ||||||
Expr1038066 | ||||||
Expr1151881 | ||||||
Expr2004032 | ||||||
Expr2022254 | ||||||
Drives_construct | WBCnstr00026306 | |||||
WBCnstr00042503 | ||||||
WBCnstr00042504 | ||||||
WBCnstr00043024 | ||||||
Construct_product | WBCnstr00026306 | |||||
Microarray_results (18) | ||||||
Expression_cluster (268) | ||||||
Interaction | WBInteraction000538982 | |||||
WBInteraction000558533 | ||||||
WBInteraction000565990 | ||||||
WBInteraction000576110 | ||||||
WBInteraction000576669 | ||||||
WBInteraction000579498 | ||||||
WBProcess | WBbiopr:00000039 | |||||
Map_info | Map | X | Position | -17.0437 | ||
Positive | Positive_clone | F53B1 | Inferred_automatically | From sequence, transcript, pseudogene data | ||
Mapping_data | Multi_point | 5461 | ||||
Reference (12) | ||||||
Remark | [2020-07-30T16:54:45.386Z WBPerson1983] Gene Merged: bus-5 confirmed as this sequenced loci also known as rml-2 | Curator_confirmed | WBPerson1983 | |||
Method | Gene |