WormBase Tree Display for Gene: WBGene00044621
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WBGene00044621 | SMap | S_parent | Sequence | F53B1 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | bus-5 | Person_evidence | WBPerson261 | |||
Sequence_name | F53B1.4 | ||||||
Molecular_name | F53B1.4 | ||||||
F53B1.4.1 | |||||||
CE04644 | |||||||
Other_name | CELE_F53B1.4 | Accession_evidence | NDB | BX284606 | |||
Public_name | bus-5 | ||||||
DB_info | Database | NDB | locus_tag | CELE_F53B1.4 | |||
NCBI | gene | 180525 | |||||
RefSeq | protein | NM_075989.3 | |||||
TREEFAM | TREEFAM_ID | TF313892 | |||||
TrEMBL | UniProtAcc | Q20697 | |||||
UniProt_GCRP | UniProtAcc | Q20697 | |||||
OMIM | gene | 616146 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Acquires_merge | WBGene00018737 | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | bus | ||||||
Reference_allele | WBVar00144919 | ||||||
Allele | WBVar00144919 | Inferred_automatically | From strain object: CB5612 | ||||
WBVar00144932 | Inferred_automatically | From strain object: CB5614 | |||||
WBVar02148835 | Inferred_automatically | From strain object: CB6991 | |||||
From strain object: CB6992 | |||||||
From strain object: DC19 | |||||||
WBVar02148846 | Inferred_automatically | From strain object: CB7448 | |||||
WBVar00144930 | |||||||
WBVar00144935 | |||||||
WBVar00144917 | |||||||
WBVar00144916 | |||||||
WBVar00145006 | |||||||
WBVar00145001 | |||||||
WBVar02157997 | |||||||
WBVar01619199 | |||||||
WBVar01619200 | |||||||
WBVar01619201 | |||||||
WBVar00496050 | |||||||
WBVar00496051 | |||||||
WBVar00496052 | |||||||
WBVar00496053 | |||||||
WBVar01499751 | |||||||
WBVar01499636 | |||||||
WBVar00075758 | |||||||
WBVar01987270 | |||||||
WBVar01124450 | |||||||
WBVar01124451 | |||||||
WBVar01124452 | |||||||
WBVar01124453 | |||||||
WBVar01124454 | |||||||
WBVar01124455 | |||||||
WBVar01124456 | |||||||
WBVar01124457 | |||||||
WBVar01124458 | |||||||
WBVar01124459 | |||||||
WBVar01124460 | |||||||
WBVar01124461 | |||||||
WBVar01124462 | |||||||
WBVar01124463 | |||||||
WBVar01124464 | |||||||
Strain | WBStrain00004659 | ||||||
WBStrain00004661 | |||||||
WBStrain00004730 | |||||||
WBStrain00004731 | |||||||
WBStrain00004762 | |||||||
WBStrain00005604 | |||||||
RNASeq_FPKM (74) | |||||||
Ortholog (30) | |||||||
Paralog (13) | |||||||
Structured_description | Concise_description | bus-5 is an uncloned gene required for colonization by Microbacterium nematophilum, the tail-swelling response to M. nematophilum infection, and for fully normal cuticle antigens and traction during movement; bus-5 is also strongly required for cuticle integrity and for long-term survival during starvation. | Paper_evidence | WBPaper00026735 | |||
WBPaper00029153 | |||||||
Curator_confirmed | WBPerson567 | ||||||
Date_last_updated | 16 Jul 2007 00:00:00 | ||||||
Automated_description | Expressed in hyp7 syncytium; hypodermal cell; and seam cell. Human ortholog(s) of this gene implicated in Catel Manzke syndrome. Is predicted to encode a protein with the following domains: NAD(P)-binding domain; NAD(P)-binding domain superfamily; and GDP-mannose 4,6 dehydratase. Is an ortholog of human TGDS (TDP-glucose 4,6-dehydratase). | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Disease_info | Potential_model | DOID:0081122 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:20324) | ||
Molecular_info | Corresponding_CDS | F53B1.4 | |||||
Corresponding_transcript | F53B1.4.1 | ||||||
Other_sequence (57) | |||||||
Associated_feature | WBsf237051 | ||||||
WBsf237052 | |||||||
Experimental_info | RNAi_result | WBRNAi00015469 | Inferred_automatically | RNAi_primary | |||
WBRNAi00032665 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00025578 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00048070 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00025577 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00027359 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr15742 | ||||||
Expr15743 | |||||||
Expr15744 | |||||||
Expr16442 | |||||||
Expr1014478 | |||||||
Expr1038066 | |||||||
Expr1151881 | |||||||
Expr2004032 | |||||||
Expr2022254 | |||||||
Drives_construct | WBCnstr00026306 | ||||||
WBCnstr00042503 | |||||||
WBCnstr00042504 | |||||||
WBCnstr00043024 | |||||||
Construct_product | WBCnstr00026306 | ||||||
Microarray_results (18) | |||||||
Expression_cluster (268) | |||||||
Interaction | WBInteraction000538982 | ||||||
WBInteraction000558533 | |||||||
WBInteraction000565990 | |||||||
WBInteraction000576110 | |||||||
WBInteraction000576669 | |||||||
WBInteraction000579498 | |||||||
WBProcess | WBbiopr:00000039 | ||||||
Map_info | Map | X | Position | -17.0437 | |||
Positive | Positive_clone | F53B1 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Mapping_data | Multi_point | 5461 | |||||
Reference (12) | |||||||
Remark | [2020-07-30T16:54:45.386Z WBPerson1983] Gene Merged: bus-5 confirmed as this sequenced loci also known as rml-2 | Curator_confirmed | WBPerson1983 | ||||
Method | Gene |