WormBase Tree Display for Gene: WBGene00004347
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WBGene00004347 | SMap | S_parent | Sequence | Y38E10A | |||
---|---|---|---|---|---|---|---|
Identity (6) | |||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | rgs | ||||||
Allele (540) | |||||||
Strain | WBStrain00026366 | ||||||
WBStrain00031678 | |||||||
RNASeq_FPKM (74) | |||||||
Ortholog (31) | |||||||
Paralog (12) | |||||||
Structured_description | Concise_description | rgs-4 encodes a regulator of G protein signaling; by homology, RGS-4 is predicted to function as a GTPase-activating protein that binds G protein alpha subunits and negatively regulates heterotrimeric G protein signaling; loss of rgs-4 activity via RNAi or a deletion mutation results in no obvious defects, and likewise, rgs-4 overexpression has no measurable effect on egg-laying behavior, locomotion, or viability; the RGS-4 expression pattern has not yet been reported. | Paper_evidence | WBPaper00004281 | |||
WBPaper00024480 | |||||||
Curator_confirmed | WBPerson1843 | ||||||
Date_last_updated | 07 Feb 2005 00:00:00 | ||||||
Automated_description | Enriched in head mesodermal cell; neurons; and ventral nerve cord based on microarray; tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; glp-1; and eat-2 based on tiling array; microarray; and RNA-seq studies. Is affected by thirteen chemicals including stavudine; Psoralens; and allantoin based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: RGS domain; RGS domain superfamily; Regulator of G protein signaling domain; and RGS, subdomain 2. | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | Y38E10A.21a | |||||
Y38E10A.21b | |||||||
Y38E10A.21c | |||||||
Y38E10A.21d | |||||||
Corresponding_CDS_history | Y38E10A.21:wp229 | ||||||
Y38E10A.21a:wp274 | |||||||
Corresponding_transcript | Y38E10A.21a.1 | ||||||
Y38E10A.21b.1 | |||||||
Y38E10A.21c.1 | |||||||
Y38E10A.21d.1 | |||||||
Other_sequence (36) | |||||||
Associated_feature | WBsf717818 | ||||||
WBsf990166 | |||||||
WBsf990167 | |||||||
WBsf990168 | |||||||
WBsf990169 | |||||||
WBsf990170 | |||||||
WBsf1013473 | |||||||
WBsf1013474 | |||||||
WBsf1013475 | |||||||
WBsf1013476 | |||||||
WBsf1013477 | |||||||
WBsf222283 | |||||||
Experimental_info | RNAi_result | WBRNAi00020288 | Inferred_automatically | RNAi_primary | |||
WBRNAi00056020 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00020287 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00056021 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Chronogram882 | ||||||
Chronogram1470 | |||||||
Expr1022441 | |||||||
Expr1027927 | |||||||
Expr1032165 | |||||||
Expr1159539 | |||||||
Expr1159540 | |||||||
Expr2007301 | |||||||
Expr2015327 | |||||||
Expr2033561 | |||||||
Drives_construct | WBCnstr00004337 | ||||||
Microarray_results (35) | |||||||
Expression_cluster (131) | |||||||
Map_info | Map | II | Position | 10.6551 | Error | 0.037636 | |
Positive | Positive_clone | Y38E10A | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Mapping_data | Multi_point | 4624 | |||||
4673 | |||||||
5028 | |||||||
Pseudo_map_position | |||||||
Reference | WBPaper00004281 | ||||||
WBPaper00055090 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |