WormBase Tree Display for Gene: WBGene00004858

WBGene00004858 SMap: S_parent: Sequence: R12B2
  Identity: Version: 1
    Name: CGC_name: sma-4 Person_evidence: WBPerson261
      Sequence_name: R12B2.1
      Molecular_name: R12B2.1a
        R12B2.1a.1
        CE25077
        R12B2.1b
        CE39618
        R12B2.1a.2
        R12B2.1b.1
      Other_name: CELE_R12B2.1 Accession_evidence: NDB BX284603
      Public_name: sma-4
    DB_info: Database (11)
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:36 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info (11)
  Disease_info: Potential_model (23)
  Molecular_info: Corresponding_CDS: R12B2.1a
      R12B2.1b
    Corresponding_CDS_history: R12B2.1:wp153
    Corresponding_transcript: R12B2.1a.1
      R12B2.1a.2
      R12B2.1b.1
    Other_sequence (19)
    Associated_feature: WBsf645214
      WBsf978482
      WBsf992539
      WBsf1014960
      WBsf225002
      WBsf225003
    Transcription_factor: WBTranscriptionFactor001046
  Experimental_info: RNAi_result (17)
    Expr_pattern: Expr7640
      Expr1013575
      Expr1032410
      Expr1155487
      Expr2015894
      Expr2034127
    Drives_construct: WBCnstr00012785
      WBCnstr00035352
    Construct_product: WBCnstr00035352
    Regulate_expr_cluster: WBPaper00037682:sma-2_sma-4_downregulated
      WBPaper00037682:sma-2_sma-4_upregulated
      WBPaper00053184:sma-4(rax3)_downregulated
      WBPaper00053184:sma-4(rax3)_upregulated
    Microarray_results: SMD_R12B2.1
      176599_at
      A_12_P101403
      A_12_P139400
      A_12_P139401
      A_12_P139402
      Aff_R12B2.1
      GPL13394_WBGene00004858
      GPL13914_R12B2.1
      GPL14144_R12B2.1a_1108-1167_0.901_15_B
      GPL14144_R12B2.1a_1542-1601_0.904_13_A
      GPL14144_R12B2.1a_635-694_0.869_26_C
      GPL19516_CGZ0032005
      GPL19516_CGZ0032006
      GPL19516_CGZ0032007
      GPL19516_CGZ0032008
      GPL19516_CGZ0032009
      GPL21109_R12B2.1a.1
      GPL3518_CE25077
      GPL8304_CE_WBGene00004858_A
      GPL8304_CE_WBGene00004858_B
      GPL8673_R12B2_1aP00590
      GPL8673_R12B2_1aP00814
      GPL8673_R12B2_1aP01048
      GPL8673_R12B2_1bP00079
      GPL8673_R12B2_1bP00164
      GPL8673_R12B2_1bP00337
      GPL9450_R12B2.1
      cea2.c.22275
    Expression_cluster: WBPaper00031040:Cluster_3
      WBPaper00031040:TGF-beta_adult_upregulated
      WBPaper00033065:cyc-1(RNAi)_upregulated
      WBPaper00036375:enriched_in_PVD_OLL
      WBPaper00037950:BAG-neuron_blastula-embryo_expressed
      WBPaper00037950:hypodermis_larva_enriched
      WBPaper00037950:hypodermis_larva_SelectivelyEnriched
      WBPaper00044426:rotenone_24h_upregulated
      WBPaper00044736:flat_dev_expression
      WBPaper00045140:aging_dynamic_regulation
      WBPaper00045521:Gender_Neutral
      WBPaper00045729:gld-2(RNAi)_upregulated
      WBPaper00045861:set-2(ok952)_upregulated
      WBPaper00045861:wdr-5(ok1417)_upregulated
      WBPaper00046338:intestine_unique
      WBPaper00046497:B.thuringiensis_0.1mix_upregulated_12h
      WBPaper00046497:B.thuringiensis_0.5mix_upregulated_6h
      WBPaper00046497:B.thuringiensis_0.5mix_upregulated_12h
      WBPaper00047132:glp-1(ts)-25C_upregulated
      WBPaper00048988:neuron_expressed
      WBPaper00050094:mes-2(bn11)_upregulated
      WBPaper00050094:mes-6(bn66)_upregulated
      WBPaper00050163:chd-3(eh4);let-418(RNAi)_upregulated_100-cell-embryo
      WBPaper00050488:20C_vs_25C_regulated_mir-34(gk437)_adult
      WBPaper00050488:20C_vs_25C_regulated_mir-34(OverExpression)_adult
      WBPaper00050488:20C_vs_25C_regulated_N2_adult
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00050488:N2_vs_mir-34(gk437)_regulated_dauer_20C
      WBPaper00050801:DAF-12_dauer_regulome
      WBPaper00050859:upregulated_glh-1(gk100)_vs_control_day1-adult
      WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
      WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day2-adult
      WBPaper00050859:upregulated_pgl-1(ct131)_vs_control_day1-adult
      WBPaper00050903:mir-35-41(nDf50)_25C_upregulated
      WBPaper00050990:arcade_intestinal-valve_expressed
      WBPaper00050990:body-muscle_expressed
      WBPaper00050990:hypodermis_expressed
      WBPaper00050990:intestine_expressed
      WBPaper00050990:seam_expressed
      WBPaper00051039:intestine_enriched
      WBPaper00051257:Levamisole_upregulated
      WBPaper00053184:sma-2(rax5)_upregulated
      WBPaper00053184:sma-4(rax3)_upregulated
      WBPaper00053302:stavudine_24h_regulated
      WBPaper00053810:nuo-6(qm200)_upregulated
      WBPaper00053814:15C_downregulated_OP50
      WBPaper00055482:pmt-2(RNAi)_upregulated
      WBPaper00055862:antimycin_damt-1(gk961032)_regulated
      WBPaper00056034:pals-22(jy3)_upregulated
      WBPaper00056090:E.faecalis_upregulated_hpx-2(dg047)
      WBPaper00056167:Cry5B_downregulated
      WBPaper00056275:P.aeruginosa_downregulated
      WBPaper00056275:P.aeruginosa_downregulated_atf-7(qd22qd130)_dependent
      WBPaper00056443:sek-1(km4)_upregulated
      WBPaper00056471:aak-1(tm1944);aak-2(ok524)_upregulated
      WBPaper00056855:his-72(uge40)_upregulated
      WBPaper00056997:nmad-1(ok3133)_upregulated_germline_25C
      WBPaper00057288:Cold_downregulated_transcript
      WBPaper00058598:sin-3(tm1276)_upregulated
      WBPaper00058711:paraquat_downregulated
      WBPaper00058942:henn-1(pk2295)_upregulated
      WBPaper00058948:PA14_downregulated
      WBPaper00059440:GLP-1_represseded
      WBPaper00059664:srbc-48(ac23)_upregulated
      WBPaper00059739:hira-1(gk835598)_upregulated_adult
      WBPaper00059895:wounding_upregulated
      WBPaper00059987:Wounding_upregulated
      WBPaper00060399:pqm-1(ok485)_upregulated_CoCl2_6hr
      WBPaper00060811:L1_vs_adult_downregulated_neural
      WBPaper00061007:S.aquatilis_upregulated
      WBPaper00061203:sin-3(tm1276)_downregulated
      WBPaper00061274:microgravity_downregulated
      WBPaper00061340:g1A_parent
      WBPaper00061340:OLQ_grandparent
      WBPaper00061340:OLQ_parent
      WBPaper00061340:Parent_of_g1P_I3
      WBPaper00061340:pm6
      WBPaper00061340:pm7
      WBPaper00061340:XXX
      WBPaper00061341:28C_24h_upregulated
      WBPaper00061478:pie-1(ne4433)_upregulated
      WBPaper00061479:hda-1(ne4752)_upregulated
      WBPaper00061479:mep-1(ne4629)_upregulated
      WBPaper00061479:ubc-9(ne4833)_upregulated
      WBPaper00061527:C32F10.4-D1086.2
      WBPaper00062159:hda-2(ok1479)_upregulated
      WBPaper00062325:muscle_depleted_coding-RNA
      WBPaper00062345:bortezomib_4h_upregulated_N2
      WBPaper00064088:Day-3-adult_vs_L4_upregulated_daf-16(mu86);glp-1(e2141)
      WBPaper00064156:lbp-3(overexpress)_upregulated
      WBPaper00064315:mes-3(bn199)_upregulated_EGCs
      WBPaper00064315:mes-4(bn73)_upregulated_EGCs
      WBPaper00064716:paraquat_downregulated
      WBPaper00064727:daf-2(e1370)_upregulated
      WBPaper00065120:body-muscle-transcriptome
      WBPaper00065993:glp-1(e2141)_upregulated
      WBPaper00066062:xrep-4(lax137)_upregulated
      WBPaper00066110:tetraploid_vs_diploid_upregulated
      WBPaper00066232:ash-2(RNAi)_downregulated_WT
      WBPaper00066232:hsf-1(RNAi)_upregulated_ash-2
      cgc4489_group_8
      WBPaper00025141:N2_Expressed_Genes
      WBPaper00025141:unc-4::GFP_Expressed_Genes
      WBPaper00026980:intestine_enriched
      WBPaper00029437:dcr-1_upregulated
      WBPaper00031003:24hr_muscle_depleted
      WBPaper00031003:total_muscle_depleted
      WBPaper00031532:Larva_Pan_Neuronal_Depleted
      WBPaper00032165:differentially_expressed_with_age_medoid_2
      WBPaper00032948:StarveUp2
      WBPaper00033101:spr-5_regulated
      WBPaper00035873:dpy-10_regulated
      WBPaper00038231:Cry5B_1.5-fold_upregulated
      WBPaper00040210:Chlorpyrifos_Diazinon_24C_regulated
      WBPaper00040858:eQTL_age_regulated_aging
      WBPaper00040858:eQTL_age_regulated_developing
      WBPaper00040858:eQTL_regulated_aging
      WBPaper00040858:eQTL_regulated_reproductive
      WBPaper00041002:HQ_3d_2.0mM_Up
      WBPaper00041174:environmental
      WBPaper00041174:genotypic
      WBPaper00041174:genotypic_and_environmental
      WBPaper00041606:CE_B.thuringiensis-DB27_regulated
      WBPaper00041606:CE_S.marcescens_regulated
      WBPaper00041606:CE_X.nematophila_regulated
      WBPaper00041906:I-3690_vs_OP50_3d
      WBPaper00041939:control_vs_EtBr-exposed_48h
      WBPaper00041939:control_vs_UVC-EtBr-exposed_48h
      WBPaper00041939:control_vs_UVC-EtBr-exposed_51h
      WBPaper00041939:EtBr-exposed_vs_UVC-exposed_48h
      WBPaper00041939:UVC-EtBr-exposed_vs_EtBr-exposed_51h
      WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_48h
      WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_51h
      WBPaper00042236:flcn-1(ok975)_upregulated
      WBPaper00042274:tbx-2(bx59)_upregulated
      WBPaper00044013:nasp-1_downregulated
      WBPaper00044091:Bpseudomallei_induced_2h
      WBPaper00044091:Bpseudomallei_induced_8h
      WBPaper00044091:Bpseudomallei_induced_12h
      WBPaper00047070:N2_starvation_upregulated
      WBPaper00048567:dnj-14_upregulated
      WBPaper00048989:eat-2(ad465)_rapamycin_downregulated
      WBPaper00048989:N2_rapamycin_upregulated
      WBPaper00053236:Starvation_regulated_GR1307
      WBPaper00053236:Starvation_regulated_N2
      WBPaper00055899:nitroguanidine_regulated
    Interaction: WBInteraction000002448
      WBInteraction000003663
      WBInteraction000003665
      WBInteraction000004013
      WBInteraction000005100
      WBInteraction000008819
      WBInteraction000009289
      WBInteraction000009624
      WBInteraction000028714
      WBInteraction000028872
      WBInteraction000029531
      WBInteraction000029583
      WBInteraction000029647
      WBInteraction000029648
      WBInteraction000030002
      WBInteraction000030162
      WBInteraction000030175
      WBInteraction000031120
      WBInteraction000031730
      WBInteraction000031731
      WBInteraction000031732
      WBInteraction000031733
      WBInteraction000031734
      WBInteraction000031736
      WBInteraction000031737
      WBInteraction000033575
      WBInteraction000033973
      WBInteraction000033975
      WBInteraction000034573
      WBInteraction000037171
      WBInteraction000037797
      WBInteraction000040655
      WBInteraction000041334
      WBInteraction000041335
      WBInteraction000041336
      WBInteraction000041795
      WBInteraction000046519
      WBInteraction000047507
      WBInteraction000047508
      WBInteraction000047509
      WBInteraction000047589
      WBInteraction000048689
      WBInteraction000048690
      WBInteraction000048692
      WBInteraction000105287
      WBInteraction000126106
      WBInteraction000126273
      WBInteraction000126277
      WBInteraction000126445
      WBInteraction000126983
      WBInteraction000142915
      WBInteraction000153226
      WBInteraction000153332
      WBInteraction000157327
      WBInteraction000157876
      WBInteraction000158849
      WBInteraction000158850
      WBInteraction000159769
      WBInteraction000159781
      WBInteraction000159801
      WBInteraction000162352
      WBInteraction000162415
      WBInteraction000162517
      WBInteraction000162557
      WBInteraction000162942
      WBInteraction000162953
      WBInteraction000162986
      WBInteraction000162987
      WBInteraction000163049
      WBInteraction000164393
      WBInteraction000164447
      WBInteraction000164488
      WBInteraction000166246
      WBInteraction000167543
      WBInteraction000167544
      WBInteraction000167648
      WBInteraction000169097
      WBInteraction000169425
      WBInteraction000169609
      WBInteraction000169613
      WBInteraction000169631
      WBInteraction000169680
      WBInteraction000169681
      WBInteraction000169682
      WBInteraction000169683
      WBInteraction000169684
      WBInteraction000169685
      WBInteraction000169686
      WBInteraction000169687
      WBInteraction000169688
      WBInteraction000169689
      WBInteraction000169775
      WBInteraction000169785
      WBInteraction000169890
      WBInteraction000169915
      WBInteraction000169998
      WBInteraction000170002
      WBInteraction000173033
      WBInteraction000173544
      WBInteraction000173583
      WBInteraction000173796
      WBInteraction000173797
      WBInteraction000174014
      WBInteraction000175055
      WBInteraction000176826
      WBInteraction000202362
      WBInteraction000202367
      WBInteraction000214025
      WBInteraction000215824
      WBInteraction000228033
      WBInteraction000228036
      WBInteraction000228037
      WBInteraction000228052
      WBInteraction000228054
      WBInteraction000228055
      WBInteraction000240538
      WBInteraction000253983
      WBInteraction000262458
      WBInteraction000264838
      WBInteraction000266003
      WBInteraction000280278
      WBInteraction000284287
      WBInteraction000288392
      WBInteraction000291567
      WBInteraction000292582
      WBInteraction000298853
      WBInteraction000330941
      WBInteraction000339638
      WBInteraction000348849
      WBInteraction000349088
      WBInteraction000351726
      WBInteraction000361740
      WBInteraction000364200
      WBInteraction000377601
      WBInteraction000384099
      WBInteraction000384337
      WBInteraction000388246
      WBInteraction000393410
      WBInteraction000417809
      WBInteraction000427005
      WBInteraction000439309
      WBInteraction000459458
      WBInteraction000500734
      WBInteraction000500735
      WBInteraction000500854
      WBInteraction000500859
      WBInteraction000501895
      WBInteraction000513537
      WBInteraction000513539
      WBInteraction000513540
      WBInteraction000513541
      WBInteraction000513543
      WBInteraction000513544
      WBInteraction000513545
      WBInteraction000513546
      WBInteraction000513548
      WBInteraction000513550
      WBInteraction000513552
      WBInteraction000513553
      WBInteraction000515688
      WBInteraction000515691
      WBInteraction000515692
      WBInteraction000516190
      WBInteraction000516411
      WBInteraction000516412
      WBInteraction000516413
      WBInteraction000516414
      WBInteraction000516415
      WBInteraction000516416
      WBInteraction000516417
      WBInteraction000516418
      WBInteraction000516419
      WBInteraction000516420
      WBInteraction000516421
      WBInteraction000516422
      WBInteraction000516423
      WBInteraction000516424
      WBInteraction000516425
      WBInteraction000516426
      WBInteraction000516427
      WBInteraction000516428
      WBInteraction000516429
      WBInteraction000516430
      WBInteraction000516431
      WBInteraction000516432
      WBInteraction000521784
      WBInteraction000525899
      WBInteraction000526171
      WBInteraction000526210
      WBInteraction000527307
      WBInteraction000527628
      WBInteraction000527775
      WBInteraction000528038
      WBInteraction000528746
      WBInteraction000528831
      WBInteraction000530500
      WBInteraction000533531
      WBInteraction000533664
      WBInteraction000533841
      WBInteraction000533881
      WBInteraction000534309
      WBInteraction000541499
      WBInteraction000555705
      WBInteraction000555973
      WBInteraction000571207
    WBProcess: WBbiopr:00000025
      WBbiopr:00000039
  Map_info: Map: III Position: -1.43987 Error: 0.00065
    Well_ordered
    Positive: Positive_clone: R12B2 Inferred_automatically: From sequence, transcript, pseudogene data
        W03A3
    Mapping_data: 2_point: 63
        6133
        7029
      Multi_point (11)
      Pos_neg_data: 2712
        2713
        7310
        8705
        8734
        8764
        8766
        8833
  Reference: WBPaper00000031
    WBPaper00000608
    WBPaper00001057
    WBPaper00001328
    WBPaper00002374
    WBPaper00002828
    WBPaper00002897
    WBPaper00002913
    WBPaper00003092
    WBPaper00003400
    WBPaper00003401
    WBPaper00003454
    WBPaper00003579
    WBPaper00003626
    WBPaper00003780
    WBPaper00003844
    WBPaper00003854
    WBPaper00003935
    WBPaper00004160
    WBPaper00004199
    WBPaper00004925
    WBPaper00005046
    WBPaper00005165
    WBPaper00005197
    WBPaper00005325
    WBPaper00005463
    WBPaper00005567
    WBPaper00005654
    WBPaper00005732
    WBPaper00005854
    WBPaper00005858
    WBPaper00006103
    WBPaper00006272
    WBPaper00006302
    WBPaper00006346
    WBPaper00006351
    WBPaper00006437
    WBPaper00006506
    WBPaper00010116
    WBPaper00010119
    WBPaper00010219
    WBPaper00010347
    WBPaper00010521
    WBPaper00010553
    WBPaper00010554
    WBPaper00010898
    WBPaper00010925
    WBPaper00010966
    WBPaper00010981
    WBPaper00011036
    WBPaper00011065
    WBPaper00011094
    WBPaper00011130
    WBPaper00011197
    WBPaper00011841
    WBPaper00013466
    WBPaper00013909
    WBPaper00014082
    WBPaper00014836
    WBPaper00014913
    WBPaper00014948
    WBPaper00015020
    WBPaper00015108
    WBPaper00015112
    WBPaper00015228
    WBPaper00015229
    WBPaper00015231
    WBPaper00015232
    WBPaper00015233
    WBPaper00015293
    WBPaper00015294
    WBPaper00015295
    WBPaper00015356
    WBPaper00015420
    WBPaper00015421
    WBPaper00015466
    WBPaper00015467
    WBPaper00017297
    WBPaper00017512
    WBPaper00018517
    WBPaper00018518
    WBPaper00018520
    WBPaper00019048
    WBPaper00019683
    WBPaper00021649
    WBPaper00021693
    WBPaper00021761
    WBPaper00022150
    WBPaper00022262
    WBPaper00022279
    WBPaper00022679
    WBPaper00022694
    WBPaper00022737
    WBPaper00022782
    WBPaper00023410
    WBPaper00023411
    WBPaper00023637
    WBPaper00023777
    WBPaper00024401
    WBPaper00024429
    WBPaper00025180
    WBPaper00026103
    WBPaper00026515
    WBPaper00026632
    WBPaper00026644
    WBPaper00027295
    WBPaper00027307
    WBPaper00027702
    WBPaper00030645
    WBPaper00030727
    WBPaper00030983
    WBPaper00031016
    WBPaper00031355
    WBPaper00031625
    WBPaper00031786
    WBPaper00031872
    WBPaper00032029
    WBPaper00032891
    WBPaper00036735
    WBPaper00037541
    WBPaper00038491
    WBPaper00043875
    WBPaper00048327
    WBPaper00051537
    WBPaper00052255
    WBPaper00052358
    WBPaper00053184
    WBPaper00055090
    WBPaper00055618
    WBPaper00058342
    WBPaper00060096
    WBPaper00060493
    WBPaper00061709
    WBPaper00061717
    WBPaper00061718
    WBPaper00061938
    WBPaper00063272
    WBPaper00064756
  Picture: WBPicture0000013077
  Method: Gene