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WormBase Tree Display for Gene: WBGene00003100

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Name Class

WBGene00003100SMapS_parentSequenceY53C12B
IdentityVersion1
NameCGC_namemab-3Person_evidenceWBPerson261
Sequence_nameY53C12B.5
Molecular_nameY53C12B.5a
Y53C12B.5a.1
CE14902
Y53C12B.5b
CE51560
Y53C12B.5b.1
Y53C12B.5b.2
Other_nameCELE_Y53C12B.5Accession_evidenceNDBBX284602
Public_namemab-3
DB_infoDatabase (11)
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:30WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_info (11)
Molecular_infoCorresponding_CDSY53C12B.5a
Y53C12B.5b
Corresponding_CDS_historyY53C12B.5b:wp253
Corresponding_transcriptY53C12B.5a.1
Y53C12B.5b.1
Y53C12B.5b.2
Other_sequenceDviv_isotig08806
Dviv_isotig08805
Oden_isotig19447
Associated_feature (16)
Gene_product_bindsWBsf977964
Transcription_factorWBTranscriptionFactor000032
Experimental_infoRNAi_resultWBRNAi00020914Inferred_automaticallyRNAi_primary
WBRNAi00057258Inferred_automaticallyRNAi_primary
WBRNAi00027798Inferred_automaticallyRNAi_primary
Expr_patternExpr950
Expr3376
Expr14651
Expr1023078
Expr1160695
Expr2013327
Expr2031559
Drives_constructWBCnstr00000514
WBCnstr00013819
WBCnstr00036229
Construct_productWBCnstr00007577
WBCnstr00013819
WBCnstr00036229
Microarray_results (28)
Expression_clusterWBPaper00033065:cyc-1(RNAi)_downregulated
WBPaper00037950:hypodermis_L3-L4-larva_expressed
WBPaper00038438:E.faecalis_24hr_upregulated_TilingArray
WBPaper00038438:S.marcescens_24hr_upregulated_TilingArray
WBPaper00040221:DAF-12_target_ALF4
WBPaper00042165:let-7_downregulated
WBPaper00042477:rsr-2(RNAi)_upregulated_TilingArray
WBPaper00044656:tatn-1(qd182)_upregulated
WBPaper00044736:flat_dev_expression
WBPaper00045390:tunicamycin_upregulated
WBPaper00045390:ubc-9(RNAi)_upregulated
WBPaper00045420:fertilization_downregulated_transcript
WBPaper00045521:Spermatogenic
WBPaper00046012:tdp-1(ok803)_upregulated
WBPaper00046805:csr-1(RNAi)_upregulated_Set1
WBPaper00046805:csr-1(RNAi)_upregulated_Set2
WBPaper00048611:MnCl2_upregulated
WBPaper00048988:daf-16(mu86)_upregulated_neuron
WBPaper00048988:neuron_expressed
WBPaper00049377:MWCNT_upregulated
WBPaper00049920:Glucose-Diet_upregulated_hyl-2(tm2031)
WBPaper00050080:rbr-2(tm3141)_downregulated
WBPaper00050231:male_enriched
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050717:let-7(n2853)_lin-41(xe11)_downregulated
WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day2-adult
WBPaper00050859:upregulated_pgl-1(ct131)_vs_control_day1-adult
WBPaper00051265:F4_hrde-1(tm1200)_upregulated
WBPaper00051404:alg-1(gk214)_downregulated
WBPaper00053295:lin-22(icb38)_downregulated
WBPaper00053302:zidovudine_72h_regulated
WBPaper00053321:nos-1(gv5)nos-2(RNAi)_upregulated_L1_SMARTseq
WBPaper00054410:set-9(rw5)_downregulated
WBPaper00054410:set-26(tm2467)_downregulated
WBPaper00054493:hpl-2(tm1489)_upregulated
WBPaper00055354:eat-2(ad1116)_downregulated
WBPaper00055354:Rifampicin-Allantoin_downregulated
WBPaper00055482:Tunicamycin_downregulated
WBPaper00055804:FBF-1-FBF-2-associated_spermatogenic-enriched
WBPaper00055827:pfd-6(gk493446)_downregulated
WBPaper00055941:atfs-1(et15)_upregulated
WBPaper00055941:nuo-6(qm200)_downregulated
WBPaper00056161:male_enriched_siRNA
WBPaper00056167:Cry5B_downregulated
WBPaper00056290:hsp-6(mg585)_upregulated
WBPaper00056330:glycine_downregulated
WBPaper00056471:aak-1(tm1944);aak-2(ok524)_upregulated
WBPaper00056617:adr-1_upregulated_L4_transcript
WBPaper00056617:adr-2_upregulated_L4_transcript
WBPaper00057068:numr-1(RNAi)_downregulated
WBPaper00057288:iff-1(RNAi)_upregulated_transcript
WBPaper00058691:sin-3(tm1276)_upregulated
WBPaper00058955:heatshock_upregulated_CE
WBPaper00059191:hsp-16.2p-LIN-29_upregulated
WBPaper00059328:mrps-5(RNAi)_downregulated_mRNA
WBPaper00059471:EGL-43_interacting
WBPaper00060526:plp-1(ok2155)_upregulated
WBPaper00060811:L1_vs_adult_downregulated_neural
WBPaper00060871:M.humicola-extract_1h_regulated
WBPaper00060909:atfs-1(cmh15)_downregulated
WBPaper00060921:cat-2(e1112)_downregulated
WBPaper00061106:endu-2(tm4977)_upregulated
WBPaper00061340:BWM_far_posterior
WBPaper00061341:28C_24h_upregulated
WBPaper00061341:28C_48h_upregulated
WBPaper00061424:Diet_MYb120_upregulated
WBPaper00061439:unc-30(ok613)_upregulated
WBPaper00061439:unc-30(ok613)_upregulated_P.aeruginosa-infection
WBPaper00061479:hda-1(ne4752)_upregulated
WBPaper00061479:mep-1(ne4629)_upregulated
WBPaper00061527:C36C5.12-F57G8.7
WBPaper00061753:csr-1(tor159)_downregulated_20C
WBPaper00061753:csr-1(tor159)_downregulated_25C
WBPaper00062325:muscle_enriched_coding-RNA
WBPaper00062345:bortezomib_4h_downregulated_N2
WBPaper00062446:nhr-8(hd117)_upregulated
WBPaper00064088:Day-1-adult_vs_L4_downregulated_fem-3(q20)
WBPaper00064130:Beta-Amyloid_8h_upregulated_mRNA
WBPaper00064532:pals-25(icb98)_downregulated
WBPaper00064539:nhr-114(gk849)_downregulated
WBPaper00064933:bcf-1(ylf1)_upregulated_transcript
WBPaper00065096:25C_vs_20C_downregulated
WBPaper00065096:Day10_vs_Day1_downregulated
WBPaper00065096:npr-8(ok1439)_upregulated_Day1_20C
WBPaper00065096:npr-8(ok1439)_upregulated_Day10_20C
WBPaper00065096:npr-8(ok1439)_upregulated_Day10_25C
WBPaper00065258:anchor-cell_depleted
WBPaper00065746:eat-2(ad1113)_downregulated
WBPaper00065841:7_4
WBPaper00065841:30_0
WBPaper00065841:30_2
WBPaper00065841:30_5
WBPaper00065841:34_0
WBPaper00065841:64_0
WBPaper00065841:141_0
WBPaper00065841:143_0
WBPaper00065841:145_0
WBPaper00065993:glp-1(e2141)_upregulated
WBPaper00066110:tetraploid_vs_diploid_upregulated
WBPaper00066146:germline-inx-14(RNAi)_upregulated_PA14
WBPaper00066232:ash-2(RNAi)_downregulated_WT
WBPaper00066232:hsf-1(RNAi)_upregulated_ash-2
WBPaper00066232:hsf-1(RNAi)_upregulated_WT
cgc4489_group_18
WBPaper00026629:L4_male_enriched
WBPaper00026929:Resveratrol_regulated_daf-16
WBPaper00031252:AIN-1_IP_enriched
WBPaper00035084:embryo_enriched_AIN-2_IP
WBPaper00035084:L1_enriched_AIN-2_IP
WBPaper00036123:Atrazine_regulated
WBPaper00036286:Pattern_G
WBPaper00040184:hcf-1nc_sir-2.1nc_daf-2down
WBPaper00040210:Chlorpyrifos_Diazinon_24C_regulated
WBPaper00040858:eQTL_age_regulated_aging
WBPaper00040858:eQTL_age_regulated_developing
WBPaper00040858:eQTL_regulated_aging
WBPaper00040858:eQTL_regulated_developing
WBPaper00040858:eQTL_regulated_juvenile
WBPaper00040858:eQTL_regulated_old
WBPaper00041939:EtBr-exposed_vs_UVC-exposed_51h
Interaction (131)
Map_infoMapIIPosition1.70477Error0.004625
Well_ordered
PositiveInside_rearreDf21
Positive_cloneY53C12BInferred_automaticallyFrom sequence, transcript, pseudogene data
Mapping_data2_point337
Multi_point206
1059
4543
Pos_neg_data2616
2617
2618
2619
2620
2621
2622
2623
2624
2625
2626
2627
2628
2629
3220
10729
Reference (118)
Remarksequence link from jah 980604
(a) removed from sequence. only .5 in sequence list. [sdm 05/00]
MethodGene