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WormBase Tree Display for Gene: WBGene00004879

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Name Class

WBGene00004879SMapS_parentSequenceC48B6
IdentityVersion1
Name (5)
DB_infoDatabase (13)
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:36WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_info (12)
Molecular_infoCorresponding_CDSC48B6.6a
C48B6.6b
Corresponding_CDS_historyC48B6.6:wp126
C48B6.6b:wp273
Corresponding_transcriptC48B6.6a.1
C48B6.6b.1
Other_sequence (18)
Associated_featureWBsf664370
WBsf664371
WBsf664372
WBsf664373
WBsf984028
WBsf1010005
WBsf219650
WBsf219651
Experimental_infoRNAi_result (20)
Expr_patternExpr1024290
Expr1032418
Expr1146716
Expr2015907
Expr2034140
Construct_productWBCnstr00007260
Regulate_expr_clusterWBPaper00053308:NMD(-)_downregulated_SMD-2_non-binding_ClassIV
WBPaper00053308:NMD(-)_upregulated_SMD-2_non-binding_ClassIII
AntibodyWBAntibody00000757
WBAntibody00002206
Microarray_results (29)
Expression_clusterWBPaper00031040:TGF-beta_adult_downregulated
WBPaper00036375:enriched_in_PVD_OLL
WBPaper00037950:all-neurons_embryo_enriched
WBPaper00037950:AVA-neuron_embryo_enriched
WBPaper00037950:GABAergic-motor-neurons_embryo_enriched
WBPaper00038168:lin-15B(n744)_upregulated
WBPaper00040420:ALM_PLM_enriched
WBPaper00042561:smg-2(RNAi)_upregulated
WBPaper00044426:rotenone_24h_downregulated
WBPaper00044736:flat_dev_expression
WBPaper00044786:emr-1(gk119)_downregulated
WBPaper00045420:fertilization_downregulated_transcript
WBPaper00045521:Gender_Neutral
WBPaper00048923:Aging_regulated
WBPaper00048988:neuron_expressed
WBPaper00049545:jmjd-3.1(+)_upregulated
WBPaper00049545:rgef-1p-jmjd-1.2(+)_upregulated
WBPaper00049545:sur-5p-jmjd-1.2(+)_upregulated
WBPaper00049920:Glucose-Diet_downregulated_hyl-2(tm2031)
WBPaper00049920:Glucose-Diet_downregulated_N2
WBPaper00049942:HeatShock_upregulated_hsf-1(RNAi)
WBPaper00050488:20C_vs_25C_regulated_N2_adult
WBPaper00050496:unc-39(hp701)_regulated
WBPaper00050726:OsmoticStress_regulated_Food
WBPaper00050726:OsmoticStress_regulated_NoFood
WBPaper00050990:body-muscle_expressed
WBPaper00050990:hypodermis_expressed
WBPaper00050990:intestine_expressed
WBPaper00050990:NMDA-neuron_expressed
WBPaper00051039:germline_enriched
WBPaper00053308:SMG-2_associated_NMD(-)_upregulated_ClassI
WBPaper00053814:25C_downregulated_PY79
WBPaper00055060:flr-1(RNAi)_upregulated
WBPaper00055103:thoc-5(wy822)_upregulated
WBPaper00055226:ADR-2_target_N2
WBPaper00055334:DLC-1_interacting
WBPaper00055354:Rapamycin-Metformin_upregulated
WBPaper00055354:Rapamycin-Psora-Allantoin_upregulated
WBPaper00055354:Rapamycin-Rifampicin-Allantoin_upregulated
WBPaper00055354:Rapamycin-Rifampicin_upregulated
WBPaper00055354:Rifampicin-Psora_upregulated
WBPaper00055354:Rifampicin_upregulated
WBPaper00055648:germline_expressed
WBPaper00055862:antimycin_damt-1(gk961032)_regulated
WBPaper00057288:Cold_downregulated_transcript
WBPaper00058691:cfp-1(tm6369)_downregulated
WBPaper00058691:set-2(bn129)_downregulated
WBPaper00059356:BAZ-2_SET-6_interacting
WBPaper00060445:ikb-1(nr2027)_upregulated_L4
WBPaper00060445:nfki-1(cer1)_upregulated_L4
WBPaper00060661:sensory-neuron_enriched
WBPaper00060811:L1_vs_adult_upregulated_neural
WBPaper00061439:unc-30(ok613)_downregulated
WBPaper00061439:unc-30(ok613)_downregulated_P.aeruginosa-infection
WBPaper00061527:gpb-1_3783-C48A7.2_22459
WBPaper00061527:npp-8_4355-afd-1_4796
WBPaper00061527:trcs-2_5724-R11A8.7_17645
WBPaper00061753:csr-1(tor159)_downregulated_20C
WBPaper00061902:camt-1(ok515)_regulated_RMG
WBPaper00062056:lin-36(we31)_upregulated
WBPaper00062325:muscle_depleted_coding-RNA
WBPaper00064005:starvation_upregulated_N2_mRNA
WBPaper00065225:nhr-42(tm1375)_upregulated_S.aureus-infected
WBPaper00065975:P-body_vs_oocyte_depleted
cgc4489_group_2
cgc4489_group_9
WBPaper00024671:AFD_AWB_vs_unsorted_upregulated
WBPaper00025032:cluster_39
WBPaper00025141:N2_Expressed_Genes
WBPaper00025141:unc-4::GFP_Expressed_Genes
WBPaper00026929:Resveratrol_regulated_daf-16
WBPaper00026929:sir-2.1_overexpression_regulated
WBPaper00031832:slr-2_regulated
WBPaper00032165:differentially_expressed_with_age_medoid_1
WBPaper00034661:AgNPs_downregulated
WBPaper00037901:GLD-1_mRNA_targets
WBPaper00038231:Cry5B_1.5-fold_upregulated
WBPaper00040823:alg-1(gk214)_downregulated
WBPaper00041002:HF_3d_0.2mM_Down
WBPaper00041002:HF_3d_2.0mM_Down
WBPaper00041002:HF_11d_2.0mM_Up
WBPaper00041606:CE_X.nematophila_regulated
WBPaper00041939:control_vs_EtBr-exposed_48h
WBPaper00041939:control_vs_UVC-EtBr-exposed_48h
WBPaper00041939:control_vs_UVC-EtBr-exposed_51h
WBPaper00041939:EtBr-exposed_vs_UVC-exposed_48h
WBPaper00041939:UVC-EtBr-exposed_vs_EtBr-exposed_51h
WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_48h
WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_51h
WBPaper00042331:a-SWCNTs_downregulated
WBPaper00055435:AuNPs_downregulated
[cgc5767]:expression_class_M
[cgc5767]:expression_class_SM
Interaction (70)
Map_infoMapIPosition1.48161Error0.009583
Well_ordered
PositivePositive_cloneC48B6Inferred_automaticallyFrom sequence, transcript, pseudogene data
F56F2
Mapping_data2_point328
Multi_point204
1889
1890
2089
5509
ReferenceWBPaper00000608
WBPaper00001009
WBPaper00001013
WBPaper00001057
WBPaper00001192
WBPaper00001437
WBPaper00001453
WBPaper00001677
WBPaper00001738
WBPaper00001813
WBPaper00001833
WBPaper00001972
WBPaper00001975
WBPaper00002277
WBPaper00002357
WBPaper00002452
WBPaper00002463
WBPaper00002635
WBPaper00002751
WBPaper00002875
WBPaper00002884
WBPaper00003389
WBPaper00003410
WBPaper00003648
WBPaper00003780
WBPaper00003943
WBPaper00004202
WBPaper00004304
WBPaper00004313
WBPaper00004325
WBPaper00004605
WBPaper00005723
WBPaper00010295
WBPaper00010429
WBPaper00010539
WBPaper00011099
WBPaper00012629
WBPaper00012638
WBPaper00012645
WBPaper00012700
WBPaper00013702
WBPaper00013705
WBPaper00013706
WBPaper00013709
WBPaper00013780
WBPaper00013850
WBPaper00013851
WBPaper00013893
WBPaper00013926
WBPaper00014275
WBPaper00014309
WBPaper00014346
WBPaper00014396
WBPaper00014397
WBPaper00014415
WBPaper00014518
WBPaper00014682
WBPaper00014840
WBPaper00015391
WBPaper00015447
WBPaper00015520
WBPaper00015553
WBPaper00015640
WBPaper00015761
WBPaper00016504
WBPaper00017069
WBPaper00018327
WBPaper00019421
WBPaper00020795
WBPaper00020895
WBPaper00020900
WBPaper00021053
WBPaper00021686
WBPaper00021975
WBPaper00021985
WBPaper00022205
WBPaper00022601
WBPaper00022610
WBPaper00022859
WBPaper00022919
WBPaper00022962
WBPaper00023177
WBPaper00023319
WBPaper00023342
WBPaper00023708
WBPaper00024133
WBPaper00024330
WBPaper00024418
WBPaper00025140
WBPaper00025643
WBPaper00026602
WBPaper00026760
WBPaper00027035
WBPaper00027258
WBPaper00027281
WBPaper00027319
WBPaper00027968
WBPaper00028549
WBPaper00029018
WBPaper00030655
WBPaper00030791
WBPaper00031120
WBPaper00031852
WBPaper00032116
WBPaper00032168
WBPaper00032237
WBPaper00032287
WBPaper00032932
WBPaper00033006
WBPaper00033013
WBPaper00033152
WBPaper00033381
WBPaper00034467
WBPaper00037111
WBPaper00038354
WBPaper00038491
WBPaper00039700
WBPaper00040602
WBPaper00040857
WBPaper00041065
WBPaper00041752
WBPaper00044211
WBPaper00051386
WBPaper00052341
WBPaper00053532
WBPaper00055090
WBPaper00058995
WBPaper00059578
WBPaper00060562
WBPaper00060662
WBPaper00060878
WBPaper00064339
WBPaper00066037
Remark[Pulak R] n2088 may be a deficiency, nDf48
Sequence connection from [O'Connor SL, Anderson RP] based on EMBL:AF149821
MethodGene