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WormBase Tree Display for Gene: WBGene00002239

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Name Class

WBGene00002239SMapS_parentSequenceF13B9
IdentityVersion1
NameCGC_nameksr-1Person_evidenceWBPerson237
Sequence_nameF13B9.5
Molecular_nameF13B9.5
F13B9.5.1
CE25854
Other_namesur-3
sar-2
CELE_F13B9.5Accession_evidenceNDBBX284606
Public_nameksr-1
DB_infoDatabase (13)
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:27WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classksr
Allele (175)
Legacy_information[Kornfeld K] ksr for kinase suppressor of ras. ksr-1 loss-of-function mutations suppress the multivulva phenotype caused by let-60(n1046gf), cause a very low penetrance defect in vulval lineages, and cause about 10% larval lethality with a characteristic rod-like morphology.
[C.elegansII] pka sur-3, sar-2. Mutations suppress ras mutation,let-60(n1046gf). No phenotype alone in VPC; some larval lethality, Egl and Mig phenotypes. [MT; MH]
StrainWBStrain00026498
WBStrain00026503
WBStrain00027335
WBStrain00027336
WBStrain00027337
WBStrain00031627
RNASeq_FPKM (74)
GO_annotation (25)
Ortholog (40)
Paralog (11)
Structured_description (2)
Disease_infoPotential_modelDOID:3458Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:6465)
DOID:1612Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:6465)
Molecular_infoCorresponding_CDSF13B9.5
Corresponding_transcriptF13B9.5.1
Other_sequence (19)
Associated_feature (7)
Experimental_infoRNAi_result (11)
Expr_patternExpr1011978
Expr1031314
Expr1148436
Expr2012981
Expr2031213
Drives_constructWBCnstr00036367
Construct_productWBCnstr00036367
Microarray_results (25)
Expression_clusterWBPaper00032976:dosage_compensated_genes
WBPaper00033065:cyc-1(RNAi)_upregulated
WBPaper00036375:enriched_in_PVD_OLL
WBPaper00037950:A-class-motor-neurons_L2-larva_expressed
WBPaper00037950:all-neurons_L1-larva_expressed
WBPaper00037950:AVA-neuron_L1-larva_expressed
WBPaper00037950:BAG-neuron_blastula-embryo_expressed
WBPaper00037950:dopaminergic-neurons_L1-larva_expressed
WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed
WBPaper00037950:excretory-cell_L2-larva_expressed
WBPaper00037950:GABAergic-motor-neurons_L2-larva_expressed
WBPaper00037950:hypodermis_L3-L4-larva_expressed
WBPaper00037950:intestine_L2-larva_expressed
WBPaper00038438:S.marcescens_24hr_downregulated_TilingArray
WBPaper00040221:DAF-12_target_ALF4
WBPaper00044736:flat_dev_expression
WBPaper00045521:Gender_Neutral
WBPaper00045974:NSM_enriched_totalRNA_RNAseq
WBPaper00046805:csr-1(RNAi)_downregulated_Set1
WBPaper00048923:Aging_regulated
WBPaper00048988:neuron_expressed
WBPaper00049545:jmjd-3.1(+)_upregulated
WBPaper00049545:rgef-1p-jmjd-1.2(+)_upregulated
WBPaper00050344:AFD-neuron_enriched
WBPaper00050488:20C_vs_25C_regulated_mir-34(gk437)_adult
WBPaper00050488:20C_vs_25C_regulated_mir-34(OverExpression)_adult
WBPaper00050488:20C_vs_25C_regulated_N2_adult
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_dauer_20C
WBPaper00050488:N2_vs_mir-34(gk437)_regulated_dauer_20C
WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day2-adult
WBPaper00050990:NMDA-neuron_enriched
WBPaper00050990:NMDA-neuron_expressed
WBPaper00051404:alg-1(gk214)_upregulated
WBPaper00051404:alg-2(ok304)_upregulated
WBPaper00052884:emb-4(hc60)_upregulated
WBPaper00053302:stavudine_24h_regulated
WBPaper00053321:PGCs_depleted_NuGen
WBPaper00053599:female_vs_male_upregulated
WBPaper00053599:oocyte_vs_mitosis_downregulated
WBPaper00053810:nuo-6(qm200)_upregulated
WBPaper00053814:25C_downregulated_OP50
WBPaper00055334:DLC-1_interacting
WBPaper00055482:Tunicamycin_upregulated
WBPaper00055565:AVK_enriched
WBPaper00056443:sek-1(km4)_upregulated
WBPaper00056471:aak-1(tm1944);aak-2(ok524)_upregulated
WBPaper00056826:hmc_biased
WBPaper00056997:nmad-1(ok3133)_upregulated_germline_25C
WBPaper00058948:PA14_downregulated
WBPaper00059328:mrps-5(RNAi)_upregulated_mRNA
WBPaper00059471:EGL-43_interacting
WBPaper00059763:neuron_expressed
WBPaper00060014:set-2(zr2012)_downregulated
WBPaper00060661:sensory-neuron_enriched
WBPaper00060811:L1_vs_adult_upregulated_neural
WBPaper00061340:ABarpaaa_lineage
WBPaper00061340:AVH_parent
WBPaper00061340:Parent_of_hyp1V_and_ant_arc_V
WBPaper00061340:Parent_of_MI_pm1DR
WBPaper00061527:ldb-1_2877-scd-1_3086
WBPaper00061651:ASG_enriched
WBPaper00062103:neuron_enriched
WBPaper00064088:Day-3-adult_vs_L4_downregulated_fem-3(q20)
WBPaper00065258:anchor-cell_enriched
WBPaper00065841:55_0
WBPaper00065995:M.humicola-extract_upregulated_old-1(ok1273)
WBPaper00066062:xrep-4(lax137)_upregulated
cgc4489_group_19
WBPaper00024671:AFD_AWB_vs_unsorted_upregulated
WBPaper00025141:unc-4::GFP_Enriched_Genes
WBPaper00026929:sir-2.1_overexpression_regulated
WBPaper00029437:dcr-1_upregulated
WBPaper00030839:Embryo_A_Class
WBPaper00030839:Embryo_Pan_Neuronal
WBPaper00030839:Larval_Pan_Neuronal
WBPaper00031252:AIN-2_IP_enriched
WBPaper00031532:Larva_Pan_Neuronal_Enriched
WBPaper00035084:L1_enriched_AIN-2_IP
WBPaper00035084:L4_enriched_AIN-2_IP
WBPaper00035588:alg-1(-)_upregulated
WBPaper00036286:Pattern_D
WBPaper00037695:WC_5-day
WBPaper00041606:CE_X.nematophila_regulated
WBPaper00041939:control_vs_UVC-EtBr-exposed_48h
WBPaper00041939:control_vs_UVC-EtBr-exposed_51h
WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_48h
WBPaper00042331:a-SWCNTs_downregulated
WBPaper00045960:L4-lethargus_upregulated
WBPaper00048989:N2_rapamycin_downregulated
[cgc5767]:cluster_60
[cgc5767]:expression_class_E
[cgc5767]:expression_class_E_pi(66_min)
[cgc5767]:expression_class_M
[cgc5767]:expression_class_ME
Interaction (99)
WBProcessWBbiopr:00000071
Map_infoMapXPosition-0.200671Error0.016778
Well_ordered
PositivePositive_cloneC33E9Person_evidenceWBPerson341
F13B9Person_evidenceWBPerson341
Inferred_automaticallyFrom sequence, transcript, pseudogene data
Mapping_dataMulti_point3616
4468
Reference (102)
MethodGene