WormBase Tree Display for Gene: WBGene00002393

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WBGene00002393	SMap	S_parent	Sequence	Y65B4BR
	Identity	Version	2
		Name	CGC_name	lpr-1	Person_evidence	WBPerson637
						WBPerson533
			Sequence_name	Y65B4BR.2
			Molecular_name (18)
			Other_name	let-124	Person_evidence	WBPerson533
				CELE_Y65B4BR.2	Accession_evidence	NDB	BX284601
			Public_name	lpr-1
		DB_info	Database	AceView	gene	1B33
				WormQTL	gene	WBGene00002393
				WormFlux	gene	WBGene00002393
				NDB	locus_tag	CELE_Y65B4BR.2
				Panther	gene	CAEEL\|WormBase=WBGene00002393\|UniProtKB=V6CKQ7
					family	PTHR37437
				NCBI	gene	171648
				RefSeq	protein	NM_058351.5
						NM_001306338.4
						NM_001306340.3
						NM_001306339.3
						NM_001306337.3
						NM_001306341.2
				TrEMBL	UniProtAcc	B6DX32
						V6CLX5
						G5EEP5
						V6CJJ4
						V6CKQ7
						B6DX33
				UniProt_GCRP	UniProtAcc	V6CKQ7
		Species	Caenorhabditis elegans
		History	Version_change	1	07 Apr 2004 11:29:27	WBPerson1971	Event	Imported	Initial conversion from geneace
				2	27 Nov 2007 14:42:31	WBPerson2970	Event	Acquires_merge	WBGene00022041
							Name_change	CGC_name	lpr-1
								Sequence_name	Y65B4BR.2
								Other_name	let-124
			Acquires_merge	WBGene00022041
		Status	Live
	Gene_info (11)
	Molecular_info	Corresponding_CDS	Y65B4BR.2a
			Y65B4BR.2b
			Y65B4BR.2c
			Y65B4BR.2d
			Y65B4BR.2e
			Y65B4BR.2f
		Corresponding_transcript	Y65B4BR.2a.1
			Y65B4BR.2b.1
			Y65B4BR.2c.1
			Y65B4BR.2d.1
			Y65B4BR.2e.1
			Y65B4BR.2f.1
		Other_sequence (17)
		Associated_feature	WBsf643022
			WBsf980931
			WBsf217146
	Experimental_info	RNAi_result	WBRNAi00057912	Inferred_automatically	RNAi_primary
			WBRNAi00091035	Inferred_automatically	RNAi_primary
			WBRNAi00004842	Inferred_automatically	RNAi_primary
			WBRNAi00024244	Inferred_automatically	RNAi_primary
			WBRNAi00021105	Inferred_automatically	RNAi_primary
			WBRNAi00012218	Inferred_automatically	RNAi_primary
		Expr_pattern	Expr8580
			Expr13230
			Expr14487
			Expr1024931
			Expr1031354
			Expr1161346
			Expr2013259
			Expr2031490
		Drives_construct	WBCnstr00013379
			WBCnstr00040911
		Construct_product	WBCnstr00040911
		Microarray_results (17)
		Expression_cluster	WBPaper00032528:L3_enriched
			WBPaper00036375:enriched_in_PVD_OLL
			WBPaper00037950:CEP-sheath-cells_Day1-adult_expressed
			WBPaper00037950:hypodermis_L1-larva_expressed
			WBPaper00037950:hypodermis_L3-L4-larva_expressed
			WBPaper00037950:hypodermis_larva_enriched
			WBPaper00037950:hypodermis_larva_SelectivelyEnriched
			WBPaper00038438:E.faecalis_24hr_upregulated_RNAseq
			WBPaper00038438:P.lumniescens_24hr_upregulated_RNAseq
			WBPaper00038438:P.lumniescens_24hr_upregulated_TilingArray
			WBPaper00038438:S.marcescens_24hr_upregulated_RNAseq
			WBPaper00040560:hpl-2_L3_upregulated
			WBPaper00042194:nhr-114(RNAi)_downregulated
			WBPaper00042477:prp-8(RNAi)_downregulated_RNAseq
			WBPaper00042477:rsr-2(RNAi)_downregulated_RNAseq
			WBPaper00043945:MeHg_upregulated
			WBPaper00044736:oscillating_dev_expression
			WBPaper00044786:emr-1(RNAi);lem-2(tm1582)_upregulated
			WBPaper00045257:bar-1(ga80)_downregulated
			WBPaper00045861:ash-2(tm1095)_upregulated
			WBPaper00046012:tdp-1(ok803)_upregulated
			WBPaper00046121:ecdoderm_unique
			WBPaper00046805:csr-1(RNAi)_upregulated_Set1
			WBPaper00046805:csr-1(RNAi)_upregulated_Set2
			WBPaper00046805:P-granule-RNAi_upregulated_Set1
			WBPaper00046887:WNT-target
			WBPaper00048611:MnCl2_upregulated
			WBPaper00049334:CE_intestine_enriched
			WBPaper00049920:Glucose-Diet_upregulated_hyl-2(tm2031)
			WBPaper00050332:skn-1(RNAi)_downregulated
			WBPaper00050332:skr-1(RNAi)-skr-2(RNAi)_downregulated
			WBPaper00050488:adult_vs_dauer_regulated_N2_20C
			WBPaper00050488:mir-34(OverExpression)_vs_N2_regulated_adult_20C
			WBPaper00050488:N2_vs_mir-34(OverExpression)_regulated_adult_25C
			WBPaper00050726:OsmoticStress_regulated_Food
			WBPaper00050726:OsmoticStress_regulated_NoFood
			WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
			WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day2-adult
			WBPaper00050990:hypodermis_enriched
			WBPaper00050990:hypodermis_expressed
			WBPaper00051352:Long-Term-Association-Memory_upregulated
			WBPaper00051404:alg-1(gk214)_downregulated
			WBPaper00051404:alg-2(ok304)_downregulated
			WBPaper00053020:sid-3(ok973)_upregulated
			WBPaper00053184:sma-4(rax3)_upregulated
			WBPaper00053302:stavudine_24h_regulated
			WBPaper00053302:zidovudine_72h_regulated
			WBPaper00053388:dauer_regulated_Cluster3
			WBPaper00053664:ins-11(tm1053)_downregulated
			WBPaper00053771:up_at_dpy-7(e88)
			WBPaper00054410:set-26(tm2467)_downregulated
			WBPaper00055013:hmg-3(bar24)_downregulated
			WBPaper00055226:ADR-2_target_adr-1(tm668)
			WBPaper00055354:eat-2(ad1116)_upregulated
			WBPaper00055386:daf-2(e1370)_upregulated
			WBPaper00055941:atfs-1(et15)_upregulated
			WBPaper00056090:E.faecalis_upregulated_hpx-2(dg047)
			WBPaper00056090:E.faecalis_upregulated_N2
			WBPaper00056161:hermaphrodite_enriched_siRNA
			WBPaper00056169:rrf-3(pk1426)_downregulated_L4
			WBPaper00056169:rrf-3(pk1426)_upregulated_embryo
			WBPaper00056169:rrf-3(pk1426)_upregulated_L1
			WBPaper00056290:hsp-6(mg585)_upregulated
			WBPaper00056330:glycine_downregulated
			WBPaper00056443:sek-1(km4)_upregulated
			WBPaper00056471:aak-1(tm1944);aak-2(ok524)_upregulated
			WBPaper00056617:adr-1_upregulated_L4_transcript
			WBPaper00056826:SGP_biased
			WBPaper00056855:his-72(uge40)_upregulated
			WBPaper00057068:numr-1(RNAi)_downregulated
			WBPaper00057068:numr-1(RNAi)_downregulated_Cadmium
			WBPaper00057347:nhr-14(tm1473)_downreglated
			WBPaper00058598:mex-1(or286)_upregulated
			WBPaper00058598:mex-3(eu149)_upregulated
			WBPaper00058598:sin-3(tm1276)_downregulated
			WBPaper00058598:spn-4(tm291)_upregulated
			WBPaper00058691:set-2(bn129)_upregulated
			WBPaper00058948:PA14_downregulated
			WBPaper00059117:B.subtilis_upregulated
			WBPaper00059231:alh-6(lax105)_L4_upregulated
			WBPaper00059328:mrps-5(RNAi)_downregulated_mRNA
			WBPaper00059421:daf-1(m40);daf-3(mgDf90)_downregulated
			WBPaper00059421:daf-3(mgDf90)_downregulated
			WBPaper00059567:olrn-1(ums9)_regulated
			WBPaper00059824:rnp-6(dh1127)_regulated_OP50
			WBPaper00059839:S.maltophilia_regulated
			WBPaper00060084:cco-1(RNAi)_downregulated_N2
			WBPaper00060273:isp-1(qm150)_upregulated
			WBPaper00060273:vrk-1(RNAi)_downregulated
			WBPaper00060358:B.thuringiensis_pathogen_regulated_elt-2(RNAi)
			WBPaper00060434:pH4.33_vs_pH6.33_downrgulated
			WBPaper00060445:ikb-1(nr2027)_downregulated_L4
			WBPaper00060445:nfki-1(cer1)_downregulated_L4
			WBPaper00060445:nfki-1(cer1)_ikb-1(nr2027)_downregulated_L4
			WBPaper00060811:L1_vs_adult_downregulated_neural
			WBPaper00060909:atfs-1(cmh15)_downregulated
			WBPaper00061007:S.aquatilis_upregulated
			WBPaper00061203:sin-3(tm1276)_upregulated
			WBPaper00061203:spr-1(ok2144)_upregulated
			WBPaper00061340:ADEsh
			WBPaper00061340:AMso
			WBPaper00061340:B_F_K_Kp_U_Y
			WBPaper00061340:CEPsh
			WBPaper00061340:CEPso
			WBPaper00061340:Excretory_duct_and_pore
			WBPaper00061340:hyp1V_and_ant_arc_V
			WBPaper00061340:hyp1_hyp2
			WBPaper00061340:Hypodermis
			WBPaper00061340:ILsh_OLLsh_OLQsh
			WBPaper00061340:P_cell
			WBPaper00061340:Rectal_cell
			WBPaper00061340:Tail_hypodermis
			WBPaper00061341:28C_24h_upregulated
			WBPaper00061341:28C_48h_upregulated
			WBPaper00061424:Diet_MYb120_upregulated
			WBPaper00061439:unc-30(ok613)_upregulated
			WBPaper00061439:unc-30(ok613)_upregulated_P.aeruginosa-infection
			WBPaper00061478:pie-1(ne4433)_upregulated
			WBPaper00061479:hda-1(ne4752)_upregulated
			WBPaper00061527:mlt-9_22518-F33D4.6_14044
			WBPaper00061613:human-alpha-Synuclein(A53T)_upregulated
			WBPaper00061651:AMso_enriched
			WBPaper00061651:CEPsh_enriched
			WBPaper00062156:jmjd-1.2(zr1010)_upregulated
			WBPaper00062156:jmjd-5(zr1234)_upregulated
			WBPaper00062159:hda-2(ok1479)_upregulated
			WBPaper00062440:crh-1(n3315)_downregulated
			WBPaper00062440:crh-1(syb385)_downregulated
			WBPaper00062446:nhr-8(hd117)_upregulated
			WBPaper00062534:fat-P-80_downregulated
			WBPaper00062534:fat-P-80_downregulated_ech-6(RNAi)
			WBPaper00062590:Aging_downregulated_neuron
			WBPaper00064088:Day-1-adult_vs_L4_downregulated_daf-16(mu86);glp-1(e2141)
			WBPaper00064088:Day-1-adult_vs_L4_downregulated_fem-3(q20)
			WBPaper00064088:Day-1-adult_vs_L4_downregulated_glp-1(e2141)
			WBPaper00064088:Day-3-adult_vs_L4_downregulated_daf-16(mu86);glp-1(e2141)
			WBPaper00064088:Day-3-adult_vs_L4_downregulated_fem-3(q20)
			WBPaper00064088:Day-3-adult_vs_L4_downregulated_glp-1(e2141)
			WBPaper00064107:lin-35(n745)_upregulated
			WBPaper00064229:B.thuringiensis-Cry5Ba_upregulated
			WBPaper00064532:pals-25(icb98)_downregulated
			WBPaper00064721:fasn-1(g14)_downregulated_starved
			WBPaper00064735:bet-1(RNAi)_vs_N2_upregulated
			WBPaper00064735:bet-1(uth41)_vs_N2_upregulated
			WBPaper00064735:mys-1(RNAi)_vs_N2_upregulated
			WBPaper00064871:hypoxia_downregulated_F1
			WBPaper00064933:bcf-1(ylf1)_upregulated_transcript
			WBPaper00065096:25C_vs_20C_downregulated
			WBPaper00065096:Day10_vs_Day1_downregulated
			WBPaper00065096:npr-8(ok1439)_upregulated_Day1_20C
			WBPaper00065315:mating_upregulated_Day2-7
			WBPaper00065315:mating_upregulated_Day6-7
			WBPaper00065581:hpk-1(pk1393)_upregulated
			WBPaper00065746:eat-2(ad1113)_downregulated
			WBPaper00065749:Heat-Shock_downregulated_N2
			WBPaper00065841:5_0
			WBPaper00065841:37_0
			WBPaper00065841:79_2
			WBPaper00065841:82_1
			WBPaper00065975:P-body_vs_oocyte_enriched
			WBPaper00065984:pals-17(syb3980)_downregulated
			WBPaper00065993:glp-1(e2141)_downregulated
			WBPaper00066062:xrep-4(lax137)_upregulated
			WBPaper00066110:tetraploid_vs_diploid_upregulated
			WBPaper00025141:N2_Expressed_Genes
			WBPaper00025141:unc-4::GFP_Expressed_Genes
			WBPaper00031003:hlh_1_enriched
			WBPaper00031252:AIN-1_IP_enriched
			WBPaper00032165:differentially_expressed_with_age_medoid_1
			WBPaper00032948:FedUp
			WBPaper00034739:N2lessDR1350
			WBPaper00034739:RIL17lessRIL14
			WBPaper00035084:embryo_enriched_AIN-2_IP
			WBPaper00035588:alg-1(-)_upregulated
			WBPaper00036130:mir-243_up_regulated
			WBPaper00036286:Pattern_G
			WBPaper00038172:aak-2overexpression_down_regulated
			WBPaper00038304:octr-1_regulated
			WBPaper00038427:lin-54_germline_changed
			WBPaper00040185:nhr-23(RNAi)_downregulated
			WBPaper00040603:tdp-1(lf)_down_vs_N2_FC_1.2
			WBPaper00040603:tdp-1(lf)_down_vs_N2_FC_1.5
			WBPaper00040858:eQTL_age_regulated_developing
			WBPaper00040963:Q100_down
			WBPaper00040963:Q200_down
			WBPaper00040985:AIN-2_asynchronous_intestine
			WBPaper00041174:genotypic
			WBPaper00041174:genotypic_prime
			WBPaper00041207:CE_dauer_down
			WBPaper00045015:acs-3(ft5)_upregulated
			WBPaper00045673:colistin_upregulated
			WBPaper00046083:oga-1(ok1207)_OP50_downregulated
			WBPaper00046083:ogt-1(ok1474)_OP50_downregulated
			WBPaper00046083:pmk-1(km25)_OP50_downregulated
			WBPaper00046853:AOBr_M.aeruginosa-batch-culture_downregulated
			WBPaper00047070:N2_starvation_downregulated
			WBPaper00047070:N2_UV_upregulated
			WBPaper00048989:N2_rapamycin_upregulated
			WBPaper00053236:Starvation_regulated_N2
			WBPaper00055899:nitroguanidine_regulated
			WBPaper00056330:mrps-5(RNAi)_upregulated
		Interaction	WBInteraction000052355
			WBInteraction000052356
			WBInteraction000503306
			WBInteraction000542445
	Map_info	Map	I	Position	-18.9527	Error	0.003336
		Positive	Inside_rearr	hDf10
				hDp13
			Positive_clone	Y65B4BR	Inferred_automatically	From sequence, transcript, pseudogene data
		Negative	Outside_rearr	hDp3
				sDf4
		Mapping_data	2_point	7166
				7167
				7168
				7169
			Multi_point	5723
			Pos_neg_data	9984
				9985
				9986
				9987
				10943
	Reference (12)
	Method	Gene