WormBase Tree Display for Gene: WBGene00006682

WBGene00006682 Evidence: Person_evidence: WBPerson655
  SMap: S_parent: Sequence: F36A2
  Identity: Version: 1
    Name: CGC_name: twk-30 Person_evidence: WBPerson655
      Sequence_name: F36A2.4
      Molecular_name: F36A2.4
        F36A2.4.1
        CE42822
      Other_name: CELE_F36A2.4 Accession_evidence: NDB BX284601
      Public_name: twk-30
    DB_info: Database: AceView gene 1J386
        WormQTL gene WBGene00006682
        WormFlux gene WBGene00006682
        NDB locus_tag CELE_F36A2.4
        Panther gene CAEEL|WormBase=WBGene00006682|UniProtKB=P90863
          family PTHR11003
        NCBI gene 185335
        RefSeq protein NM_059980.7
        TrEMBL UniProtAcc P90863
        UniProt_GCRP UniProtAcc P90863
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:41 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: twk
    Allele (30)
    Strain: WBStrain00031939
    RNASeq_FPKM (74)
    GO_annotation (11)
    Contained_in_operon: CEOP1504
    Ortholog (37)
    Paralog (47)
    Structured_description: Automated_description: Predicted to enable outward rectifier potassium channel activity and potassium ion leak channel activity. Predicted to be involved in potassium ion transmembrane transport and stabilization of membrane potential. Predicted to be located in membrane. Expressed in DD neuron; motor neurons; neurons; and ventral cord neurons. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F36A2.4
    Corresponding_CDS_history: F36A2.4:wp101
      F36A2.4:wp192
    Corresponding_transcript: F36A2.4.1
    Other_sequence (20)
    Associated_feature: WBsf649421
      WBsf664604
      WBsf664605
      WBsf219986
  Experimental_info: RNAi_result: WBRNAi00003605 Inferred_automatically: RNAi_primary
      WBRNAi00046445 Inferred_automatically: RNAi_primary
      WBRNAi00031827 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1374
      Expr4853
      Expr10602
      Expr1014125
      Expr1032774
      Expr1150314
      Expr2017657
      Expr2035797
    Drives_construct: WBCnstr00010248
      WBCnstr00012281
      WBCnstr00017030
    Construct_product: WBCnstr00010248
      WBCnstr00016675
    Microarray_results (18)
    Expression_cluster: WBPaper00024970:GABAergic_neuron_specific
      WBPaper00031040:TGF-beta_adult_upregulated
      WBPaper00040221:DAF-12_target_ALF4
      WBPaper00044736:flat_dev_expression
      WBPaper00044760:somatic_specific
      WBPaper00045521:Gender_Neutral
      WBPaper00045974:NSM_enriched_totalRNA_RNAseq
      WBPaper00048988:neuron_enriched
      WBPaper00048988:neuron_expressed
      WBPaper00049545:cco-1(RNAi)_upregulated
      WBPaper00049545:jmjd-3.1(+)_upregulated
      WBPaper00049545:rgef-1p-jmjd-1.2(+)_upregulated
      WBPaper00049545:sur-5p-jmjd-1.2(+)_upregulated
      WBPaper00050163:chd-3(eh4);let-418(RNAi)_upregulated_24-cell-embryo
      WBPaper00050163:chd-3(eh4)_upregulated_24-cell-embryo
      WBPaper00050344:AFD-neuron_enriched
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00050726:OsmoticStress_regulated_Food
      WBPaper00050726:OsmoticStress_regulated_NoFood
      WBPaper00053295:lin-22(ot269)_upregulated
      WBPaper00055334:DLC-1_interacting
      WBPaper00055354:eat-2(ad1116)_downregulated
      WBPaper00055354:Rapamycin-Metformin_downregulated
      WBPaper00055354:Rapamycin-Rifampicin-Allantoin_downregulated
      WBPaper00055354:Rapamycin-Rifampicin-Psora_downregulated
      WBPaper00055354:Rapamycin-Rifampicin_downregulated
      WBPaper00055354:Rifampicin-Allantoin_downregulated
      WBPaper00055354:Rifampicin-Psora_downregulated
      WBPaper00056139:soil-microbiota_downregulated
      WBPaper00058691:cfp-1(tm6369)_upregulated
      WBPaper00058691:set-2(bn129)_upregulated
      WBPaper00058691:sin-3(tm1276)_upregulated
      WBPaper00058948:PA14_downregulated
      WBPaper00059027:neuron-synapses_depleted
      WBPaper00059328:mrps-5(RNAi)_upregulated_mRNA
      WBPaper00059664:srbc-48(ac23)_upregulated
      WBPaper00059763:neuron_expressed
      WBPaper00060811:L1_vs_adult_upregulated_neural
      WBPaper00061340:DA
      WBPaper00061340:DA_DB
      WBPaper00061340:DB
      WBPaper00061340:DD
      WBPaper00061340:DVC
      WBPaper00061340:RID
      WBPaper00061340:SMB
      WBPaper00061340:URX
      WBPaper00061341:28C_24h_upregulated
      WBPaper00061341:28C_48h_upregulated
      WBPaper00061527:xbx-3-DH11.5_20397
      WBPaper00061651:AS_enriched
      WBPaper00061651:DA9_enriched
      WBPaper00061651:DA_enriched
      WBPaper00061651:DB01_enriched
      WBPaper00061651:DB_enriched
      WBPaper00061651:I3_enriched
      WBPaper00061651:MC_enriched
      WBPaper00061651:PDA_enriched
      WBPaper00061651:PDB_enriched
      WBPaper00061651:VA12_enriched
      WBPaper00061651:VA_enriched
      WBPaper00061651:VB_enriched
      WBPaper00061902:camt-1(ok515)_regulated_URX-AQR-PQR
      WBPaper00062103:neuron_enriched
      WBPaper00062159:hda-2(ok1479)_upregulated
      WBPaper00062193:skn-1(RNAi)_downregulated
      WBPaper00062325:muscle_depleted_coding-RNA
      WBPaper00062590:Aging_downregulated_neuron
      WBPaper00064071:NHR-49_interacting
      WBPaper00064088:Day-3-adult_vs_L4_downregulated_daf-16(mu86);glp-1(e2141)
      WBPaper00064735:bet-1(RNAi)_vs_N2_upregulated
      WBPaper00064735:bet-1(uth41)_vs_N2_upregulated
      WBPaper00064735:mys-1(RNAi)_vs_N2_upregulated
      WBPaper00064933:bcf-1(ylf1)_upregulated_transcript
      WBPaper00065096:25C_vs_20C_downregulated
      WBPaper00065841:6_0
      WBPaper00065841:6_1
      WBPaper00065841:6_2
      WBPaper00065841:6_3
      WBPaper00065841:14_0
      WBPaper00065841:14_1
      WBPaper00065841:14_2
      WBPaper00065841:53_0
      WBPaper00065841:58_0
      WBPaper00065841:58_1
      WBPaper00065841:67_0
      WBPaper00065841:125_0
      WBPaper00065841:132_0
      WBPaper00065841:133_0
      WBPaper00065841:134_0
      WBPaper00065841:135_0
      WBPaper00065841:136_0
      WBPaper00066062:xrep-4(lax137)_upregulated
      WBPaper00025141:N2_Expressed_Genes
      WBPaper00025141:unc-4::GFP_Enriched_Genes
      WBPaper00025141:unc-4::GFP_Expressed_Genes
      WBPaper00030839:Embryo_A_Class
      WBPaper00030839:Larval_A_Class
      WBPaper00030839:Larval_Pan_Neuronal
      WBPaper00031532:Larva_Pan_Neuronal_Enriched
      WBPaper00036286:Pattern_I
      WBPaper00040858:eQTL_regulated_old
      WBPaper00040876:mir-35_downregulated
      WBPaper00041939:control_vs_EtBr-exposed_24h
      WBPaper00041939:control_vs_UVC-EtBr-exposed_51h
      WBPaper00041939:control_vs_UVC-exposed_51h
      WBPaper00041939:EtBr-exposed_vs_UVC-exposed_24h
      WBPaper00041939:UVC-EtBr-exposed_vs_EtBr-exposed_3h
      WBPaper00041939:UVC-EtBr-exposed_vs_EtBr-exposed_51h
      WBPaper00048563:L1_DD_enriched
      WBPaper00048989:N2_allantoin_upregulated
  Map_info: Map: I Position: 3.16331 Error: 0.006374
    Positive: Positive_clone: F36A2 Inferred_automatically: From CDS info
            From sequence, transcript, pseudogene data
    Mapping_data: Multi_point: 5011
        4425
        5566
    Pseudo_map_position
  Reference: WBPaper00024163
    WBPaper00025141
    WBPaper00026748
    WBPaper00038491
    WBPaper00055090
    WBPaper00064001
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene