WormBase Tree Display for Gene: WBGene00007217

WBGene00007217 SMap: S_parent: Sequence: C01A2
  Identity: Version: 2
    Name: CGC_name: tads-1 Person_evidence: WBPerson2264
      Sequence_name: C01A2.5
      Molecular_name: C01A2.5
        C01A2.5.1
        CE07787
      Other_name: CELE_C01A2.5 Accession_evidence: NDB BX284601
      Public_name: tads-1
    DB_info: Database: AceView gene 1N977
        WormQTL gene WBGene00007217
        WormFlux gene WBGene00007217
        NDB locus_tag CELE_C01A2.5
        Panther gene CAEEL|WormBase=WBGene00007217|UniProtKB=O02209
          family PTHR12775
        NCBI gene 173206
        RefSeq protein NM_060954.8
        TREEFAM TREEFAM_ID TF314621
        TrEMBL UniProtAcc O02209
        UniProt_GCRP UniProtAcc O02209
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:47 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 27 Jun 2014 15:53:55 WBPerson2970 Name_change: CGC_name: tads-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: tads
    Allele (68)
    Strain: WBStrain00037727
    RNASeq_FPKM (74)
    GO_annotation: 00026739
      00115430
    Contained_in_operon: CEOP1696
    Ortholog (33)
    Structured_description: Automated_description: Predicted to be involved in mitotic DNA replication termination. Predicted to be located in nucleus. Is an ortholog of human RTF2 (replication termination factor 2). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C01A2.5
    Corresponding_transcript: C01A2.5.1
    Other_sequence (84)
    Associated_feature: WBsf643799
      WBsf979007
      WBsf985851
      WBsf1011064
      WBsf218720
  Experimental_info: RNAi_result (41)
    Expr_pattern: Expr1014715
      Expr1033111
      Expr1143372
      Expr2017204
      Expr2035340
    Drives_construct: WBCnstr00033913
    Construct_product: WBCnstr00033913
    Microarray_results (21)
    Expression_cluster: WBPaper00031040:TGF-beta_adult_downregulated
      WBPaper00032425:up_in_zfp-1
      WBPaper00035269:cde-1_regulated
      WBPaper00037950:A-class-motor-neurons_L2-larva_expressed
      WBPaper00037950:all-neurons_L1-larva_expressed
      WBPaper00037950:all-neurons_L2-larva_expressed
      WBPaper00037950:AVA-neuron_L1-larva_expressed
      WBPaper00037950:AVE-neuron_L1-larva_expressed
      WBPaper00037950:bodywall-muscle_L2-larva_expressed
      WBPaper00037950:coelomocytes_L2-larva_expressed
      WBPaper00037950:dopaminergic-neurons_L1-larva_expressed
      WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed
      WBPaper00037950:dopaminergic-neurons_larva_enriched
      WBPaper00037950:excretory-cell_L2-larva_expressed
      WBPaper00037950:GABAergic-motor-neurons_L1-larva_expressed
      WBPaper00037950:GABAergic-motor-neurons_L2-larva_expressed
      WBPaper00037950:hypodermis_larva_enriched
      WBPaper00037950:intestine_L2-larva_expressed
      WBPaper00037950:PVD-OLL-neurons_L3-L4-larva_expressed
      WBPaper00038438:E.faecalis_24hr_downregulated_TilingArray
      WBPaper00044656:tatn-1(qd182)_downregulated
      WBPaper00044736:flat_dev_expression
      WBPaper00045521:Gender_Neutral
      WBPaper00045571:germline-ablation_downregulated
      WBPaper00048923:Aging_regulated
      WBPaper00048988:neuron_expressed
      WBPaper00049942:hsf-1(RNAi)_downregulated
      WBPaper00050344:AFD-neuron_enriched
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00050990:arcade_intestinal-valve_expressed
      WBPaper00050990:GABAergic-neuron_expressed
      WBPaper00050990:hypodermis_expressed
      WBPaper00050990:intestine_expressed
      WBPaper00051039:germline_enriched
      WBPaper00053184:sma-4(rax3)_downregulated
      WBPaper00053302:zidovudine_72h_regulated
      WBPaper00053321:embryo-to-L1_downregulated_nos-1(gv5)nos-2(RNAi)_SMARTseq
      WBPaper00053713:Pheromone-induced_postdauer_vs_control_downregulated
      WBPaper00054493:hpl-2(tm1489)_downregulated
      WBPaper00055482:Tunicamycin_upregulated
      WBPaper00055648:germline_expressed
      WBPaper00055862:antimycin_damt-1(gk961032)_regulated
      WBPaper00056034:pals-22(jy3)_downregulated
      WBPaper00056090:E.faecalis_downregulated_hpx-2(dg047)
      WBPaper00058691:WDR-5.1_interacting_protein
      WBPaper00058958:100mGy-irradiation-72h_downregulated
      WBPaper00059328:mrps-5(RNAi)_upregulated_mRNA
      WBPaper00059763:neuron_expressed
      WBPaper00060014:set-2(tm1630)_upregulated
      WBPaper00060459:bcat-1(RNAi)_downregulated
      WBPaper00060683:hlh-11(ko1)_downregulated
      WBPaper00061340:ADL_parent
      WBPaper00061340:AVH_parent
      WBPaper00061340:Neuroblast_ADF_AWB
      WBPaper00061340:Neuroblast_AFD_RMD
      WBPaper00061340:Neuroblast_AWC_SAAVx
      WBPaper00061340:Parent_of_exc_duct_pore_DB_1_3
      WBPaper00061340:Parent_of_hyp3_ILsoDx
      WBPaper00061340:PVQ_parent
      WBPaper00061340:RID_parent
      WBPaper00061340:RIM_parent
      WBPaper00061341:28C_24h_downregulated
      WBPaper00061341:28C_48h_downregulated
      WBPaper00061527:skr-16-F37B4.10
      WBPaper00062159:hda-2(ok1479)_downregulated
      WBPaper00062498:PPM-1.D_interacting
      WBPaper00064005:starvation_upregulated_N2_mRNA
      WBPaper00064494:postdauer_downregulated_AWA
      WBPaper00064716:paraquat_upregulated
      WBPaper00065993:glp-1(e2141)_downregulated
      WBPaper00066110:tetraploid_vs_diploid_downregulated
      cgc4489_group_7
      WBPaper00025141:N2_Expressed_Genes
      WBPaper00026929:sir-2.1_overexpression_regulated
      WBPaper00031532:Larva_Pan_Neuronal_Enriched
      WBPaper00036123:Atrazine_regulated
      WBPaper00036286:Pattern_F
      WBPaper00040858:eQTL_age_regulated_developing
      WBPaper00040858:eQTL_regulated_aging
      WBPaper00040858:eQTL_regulated_developing
      WBPaper00040858:eQTL_regulated_reproductive
      WBPaper00041002:HF_3d_2.0mM_Up
      WBPaper00041606:CE_X.nematophila_regulated
      WBPaper00041939:EtBr-exposed_vs_UVC-exposed_48h
      WBPaper00048989:N2_rapamycin_downregulated
      WBPaper00057098:SiO2-nanoparticles_upregulated
      [cgc5767]:expression_class_M
      [cgc5767]:expression_class_SM
      [cgc6390]:mixed_oogenesis-somatic
    Interaction (18)
  Map_info: Map: I Position: 19.5106
    Positive: Positive_clone: C01A2 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00026498
    WBPaper00030887
    WBPaper00038491
    WBPaper00048493
    WBPaper00055090
    WBPaper00064339
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene