WormBase Tree Display for Gene: WBGene00007240

WBGene00007240 SMap: S_parent: Sequence: C01G10
  Identity: Version: 1
    Name: Sequence_name: C01G10.15
      Molecular_name: C01G10.15
        C01G10.15.1
        CE34643
      Other_name: CELE_C01G10.15 Accession_evidence: NDB BX284605
      Public_name: C01G10.15
    DB_info: Database: AceView gene 5P568
        WormQTL gene WBGene00007240
        WormFlux gene WBGene00007240
        NDB locus_tag CELE_C01G10.15
        NCBI gene 3565227
        RefSeq protein NM_001026184.3
        TrEMBL UniProtAcc Q7YX84
        UniProt_GCRP UniProtAcc Q7YX84
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:47 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (12)
    RNASeq_FPKM (74)
    Ortholog: WBGene00032672 Caenorhabditis briggsae From_analysis: OMA
      WBGene00070393 Caenorhabditis remanei From_analysis: OMA
      WBGene00123252 Caenorhabditis japonica From_analysis: OMA
      WBGene00155353 Caenorhabditis brenneri From_analysis: OMA
      WBGene00158480 Caenorhabditis brenneri From_analysis: OMA
      chrV_pilon.g16692 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Automated_description: Enriched in several structures, including ABarpapaapp; ABplaaaaapp; AVA; MSaapaapa; and accessory cell based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including daf-2; skn-1; and daf-12 based on microarray; tiling array; and RNA-seq studies. Is affected by four chemicals including Sodium Chloride; antimycin; and Ag nanoparticles based on RNA-seq studies. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C01G10.15
    Corresponding_transcript: C01G10.15.1
    Associated_feature: WBsf653436
      WBsf1002233
      WBsf1020975
      WBsf235028
      WBsf235029
  Experimental_info: RNAi_result: WBRNAi00001314 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1029032
      Expr1143436
      Expr2000289
      Expr2018512
    Drives_construct: WBCnstr00033894
    Construct_product: WBCnstr00033894
    Microarray_results: A_12_P120120
      GPL14144_C01G10.15_239-298_0.968_1_A
      GPL19516_CGZ0001739
      GPL21109_C01G10.15
      GPL8304_CE_WBGene00007240_A
      GPL8673_C01G10_15P00014
      GPL8673_C01G10_15P00162
      GPL8673_C01G10_15P00233
    Expression_cluster: WBPaper00037624:ets-4(ok165)_upregulated
      WBPaper00037950:bodywall-muscle_L1-larva_expressed
      WBPaper00037950:germline-precursors_blastula-embryo_expressed
      WBPaper00037950:hypodermis_L1-larva_expressed
      WBPaper00037950:pharyngeal-muscle_L1-larva_expressed
      WBPaper00038438:Harposporium_24hr_upregulated_RNAseq
      WBPaper00038438:P.lumniescens_24hr_upregulated_TilingArray
      WBPaper00038438:S.marcescens_24hr_upregulated_TilingArray
      WBPaper00040221:DAF-12_target_ALF4
      WBPaper00044578:reduced-humidity_downregulated_microarray
      WBPaper00044736:oscillating_dev_expression
      WBPaper00045390:ubc-9(RNAi)_upregulated
      WBPaper00046012:tdp-1(ok803)_upregulated
      WBPaper00046024:sleep_downregulated_oscillating
      WBPaper00049545:jmjd-3.1(+)_upregulated
      WBPaper00049545:rgef-1p-jmjd-1.2(+)_upregulated
      WBPaper00049545:sur-5p-jmjd-1.2(+)_upregulated
      WBPaper00050370:dpy-21(e428)_L3_upregulated
      WBPaper00050488:N2_vs_mir-34(OverExpression)_regulated_dauer_20C
      WBPaper00050726:OsmoticStress_regulated_Food
      WBPaper00050726:OsmoticStress_regulated_NoFood
      WBPaper00050743:elli-1(sam-3)_upregulated
      WBPaper00050990:pharynx_enriched
      WBPaper00050990:pharynx_expressed
      WBPaper00051404:alg-1(gk214)_upregulated
      WBPaper00053184:sma-2(rax5)_upregulated
      WBPaper00053184:sma-4(rax3)_upregulated
      WBPaper00053318:Aging_downregulated_mRNA_N2
      WBPaper00053368:F.oxysporum_regulated
      WBPaper00053402:cco-1(RNAi)_upregulated
      WBPaper00053402:his-3(RNAi)_upregulated
      WBPaper00053606:elt-2(ca15)_vs_elt-2(ca15);elt-7(tm840)_upregulated
      WBPaper00053771:down_by_skn-1(RNAi)_at_24h-NaCl
      WBPaper00053771:down_by_skn-1(RNAi)_at_dpy-7(e88)
      WBPaper00053810:sod-2(ok1030)_upregulated
      WBPaper00055013:hmg-4(RNAi)_upregulated
      WBPaper00055013:spt-16(RNAi)_upregulated
      WBPaper00055137:S.maltophilia_downregulated
      WBPaper00055226:adr-1(tm668)_upregulated
      WBPaper00055626:pry-1(mu38)_upregulated
      WBPaper00055648:male-CEM-neurons_expressed
      WBPaper00055827:daf-2(e1370)_upregulated
      WBPaper00055862:antimycin_damt-1(gk961032)_regulated
      WBPaper00056169:rrf-3(pk1426)_downregulated_L2
      WBPaper00056471:aak-1(tm1944);aak-2(ok524)_upregulated
      WBPaper00058598:mex-1(or286)_downregulated
      WBPaper00059117:B.subtilis_upregulated
      WBPaper00059334:sacy-1(depletion)_regulated
      WBPaper00059426:Ag-nanoparticles_downregulated
      WBPaper00059728:5ug_cholesterol_upregulated
      WBPaper00060014:set-2(zr2012)_downregulated
      WBPaper00060526:plp-1(ok2155)_upregulated
      WBPaper00061340:AVA
      WBPaper00061340:g1A_parent
      WBPaper00061340:Glia
      WBPaper00061340:Neuroblast_URX_CEPDx
      WBPaper00061439:unc-30(ok613)_upregulated_P.aeruginosa-infection
      WBPaper00061699:daf-18(ok480)_upregulated
      WBPaper00061753:csr-1(tor159)_upregulated_20C
      WBPaper00061995:mter-4(syb3662syb3403)_downregulated
      WBPaper00062159:hda-2(ok1479)_upregulated
      WBPaper00062325:muscle_depleted_coding-RNA
      WBPaper00062446:nhr-8(hd117)_upregulated
      WBPaper00064005:starvation_downregulated_aptf-1(gk794)_mRNA
      WBPaper00064005:starvation_downregulated_N2_mRNA
      WBPaper00064721:fasn-1(g14)_downregulated_starved
      WBPaper00064769:him-17(me24)_upregulated
      WBPaper00065096:npr-8(ok1439)_upregulated_Day1_20C
      WBPaper00065096:npr-8(ok1439)_upregulated_Day1_25C
      WBPaper00065096:npr-8(ok1439)_upregulated_Day10_25C
      WBPaper00065120:body-muscle-transcriptome
      WBPaper00065581:hpk-1(pk1393)_upregulated
      WBPaper00065749:Heat-Shock_downregulated_N2
      WBPaper00065841:9_1
      WBPaper00065841:9_2
      WBPaper00065841:26_0
      WBPaper00065841:26_1
      WBPaper00065926:pgph-2(overepxreesion)_upregulated_glucose
      WBPaper00066062:xrep-4(lax137)_upregulated
      WBPaper00066110:Doxorubicin_upregulated_diploid
      WBPaper00066110:tetraploid_vs_diploid_upregulated
  Map_info: Positive: Positive_clone: C01G10 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: V 7.34062
  Method: Gene