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WormBase Tree Display for Gene: WBGene00007285

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Name Class

WBGene00007285SMapS_parentSequenceC04A11
IdentityVersion1
NameSequence_nameC04A11.1
Molecular_nameC04A11.1a
C04A11.1a.1
CE23516
C04A11.1b
CE52796
C04A11.1b.1
Other_nameCELE_C04A11.1Accession_evidenceNDBBX284606
Public_nameC04A11.1
DB_infoDatabaseAceViewgeneXO281
WormQTLgeneWBGene00007285
WormFluxgeneWBGene00007285
NDBlocus_tagCELE_C04A11.1
NCBIgene181486
RefSeqproteinNM_001368537.5
NM_077887.5
TrEMBLUniProtAccA0A3B1E041
O17567
UniProt_GCRPUniProtAccO17567
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:47WBPerson1971EventImportedInitial conversion from CDS class of WS125
StatusLive
Gene_infoBiotypeSO:0001217
Allele (55)
RNASeq_FPKM (74)
GO_annotation00003317
Ortholog (24)
Structured_descriptionAutomated_descriptionPredicted to be located in membrane.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSC04A11.1a
C04A11.1b
Corresponding_transcriptC04A11.1a.1
C04A11.1b.1
Other_sequenceCBC14888_1
CRC09233_1
Dviv_isotig00202
CR05629
Associated_featureWBsf718754
WBsf1007681
WBsf1007682
WBsf1007683
WBsf1007684
WBsf1007685
WBsf1024273
WBsf1024274
WBsf236597
Experimental_infoRNAi_resultWBRNAi00028408Inferred_automaticallyRNAi_primary
WBRNAi00039565Inferred_automaticallyRNAi_primary
WBRNAi00010089Inferred_automaticallyRNAi_primary
Expr_patternExpr1011415
Expr1033141
Expr1143668
Expr2000386
Expr2018609
Drives_constructWBCnstr00033860
Construct_productWBCnstr00033860
Microarray_results (20)
Expression_clusterWBPaper00024970:GABAergic_neuron_specific
WBPaper00032425:up_in_alg-1
WBPaper00032976:dosage_compensated_genes
WBPaper00037950:A-class-motor-neurons_L2-larva_expressed
WBPaper00037950:A-class-motor-neurons_larva_enriched
WBPaper00037950:A-class-motor-neurons_larva_SelectivelyEnriched
WBPaper00037950:coelomocytes_embryo_enriched
WBPaper00037950:coelomocytes_embryo_SelectivelyEnriched
WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed
WBPaper00037950:excretory-cell_L2-larva_expressed
WBPaper00037950:glr-1(+)-neurons_L2-larva_expressed
WBPaper00037950:pharyngeal-muscle_L1-larva_expressed
WBPaper00037950:PVD-OLL-neurons_L3-L4-larva_expressed
WBPaper00038438:E.faecalis_24hr_upregulated_RNAseq
WBPaper00040560:hpl-2_L3_downregulated
WBPaper00044037:eat-2_upregulated
WBPaper00044426:rotenone_24h_upregulated
WBPaper00044736:oscillating_dev_expression
WBPaper00044786:emr-1(gk119)_upregulated
WBPaper00045974:NSM_enriched_totalRNA_tiling
WBPaper00046024:sleep_upregulated_oscillating
WBPaper00048988:neuron_expressed
WBPaper00049545:cco-1(RNAi)_upregulated
WBPaper00049545:jmjd-3.1(+)_upregulated
WBPaper00049545:rgef-1p-jmjd-1.2(+)_upregulated
WBPaper00049545:sur-5p-jmjd-1.2(+)_upregulated
WBPaper00050370:dpy-21(e428)_L3_upregulated
WBPaper00050412:cco-1(RNAi)_upregulated_N2
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050726:OsmoticStress_regulated_Food
WBPaper00050726:OsmoticStress_regulated_NoFood
WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day2-adult
WBPaper00050990:pharynx_enriched
WBPaper00050990:pharynx_expressed
WBPaper00053184:sma-2(rax5)_upregulated
WBPaper00053184:sma-4(rax3)_upregulated
WBPaper00053302:stavudine_24h_regulated
WBPaper00053302:zidovudine_72h_regulated
WBPaper00053402:cco-1(RNAi)_downregulated
WBPaper00054758:alg-1(gk204)_upregulated
WBPaper00055354:Rapamycin_downregulated
WBPaper00055386:daf-2(e1370)_upregulated
WBPaper00055482:pmt-2(RNAi)_upregulated
WBPaper00055626:pry-1(mu38)_downregulated
WBPaper00055648:spermatheca_expressed
WBPaper00055971:nhl-2(ok818)_25C_upregulated
WBPaper00056090:E.faecalis_upregulated_hpx-2(dg047)
WBPaper00056090:E.faecalis_upregulated_N2
WBPaper00056284:ints-11(RNAi)_downregulated
WBPaper00056443:sek-1(km4)_upregulated
WBPaper00056471:aak-1(tm1944);aak-2(ok524)_downregulated
WBPaper00057068:ints-4(RNAi)_downregulated
WBPaper00058598:mex-1(or286)_upregulated
WBPaper00058598:mex-3(eu149)_upregulated
WBPaper00058598:sin-3(tm1276)_downregulated
WBPaper00058598:spn-4(tm291)_upregulated
WBPaper00059027:neuron-synapses_depleted
WBPaper00059117:B.subtilis_upregulated
WBPaper00059421:daf-3(mgDf90)_downregulated
WBPaper00059471:EGL-43_interacting
WBPaper00059566:wdr-23(mac32)_upregulated
WBPaper00059664:srbc-48(ac23)_upregulated
WBPaper00059728:5ug_cholesterol_upregulated
WBPaper00059728:20ug_cholesterol_upregulated
WBPaper00060014:set-2(tm1630)_downregulated
WBPaper00060358:B.thuringiensis_non-pathogen_regulated_elt-2(RNAi)
WBPaper00060358:B.thuringiensis_pathogen_regulated_elt-2(RNAi)
WBPaper00060459:bcat-1(RNAi)_upregulated
WBPaper00060661:sensory-neuron_enriched
WBPaper00060683:hlh-11(ko1)_upregulated
WBPaper00060811:L1_vs_adult_upregulated_neural
WBPaper00061203:sin-3(tm1276)_upregulated
WBPaper00061340:ALA
WBPaper00061340:AMsh
WBPaper00061340:Arcade_cell_anterior_and_posterior
WBPaper00061340:CEP
WBPaper00061340:Excretory_cell_parent
WBPaper00061340:g1A
WBPaper00061340:IL1
WBPaper00061340:ILsh_OLLsh_OLQsh
WBPaper00061340:OLL
WBPaper00061340:RIC
WBPaper00061424:Diet_MYb120_upregulated
WBPaper00061479:hda-1(ne4752)_upregulated
WBPaper00061527:F13H6.1_2706-T25F10.3_3473
WBPaper00061527:lon-8-C18D11.1_11630
WBPaper00061902:camt-1(ok515)_regulated_URX-AQR-PQR
WBPaper00062103:neuron_enriched
WBPaper00062156:jmjd-5(zr1234)_upregulated
WBPaper00062159:hda-2(ok1479)_upregulated
WBPaper00062325:muscle_depleted_coding-RNA
WBPaper00064088:Day-1-adult_vs_L4_upregulated_daf-16(mu86);glp-1(e2141)
WBPaper00064088:Day-1-adult_vs_L4_upregulated_glp-1(e2141)
WBPaper00064306:Agaro-oligosaccharides_upregulated
WBPaper00064721:fasn-1(g14)_downregulated_starved
WBPaper00065749:Heat-Shock_downregulated_endu-2(tm4977)
WBPaper00065835:Day11_vs_Day1_upregulated
WBPaper00065841:69_0
WBPaper00065993:glp-1(e2141)_upregulated
WBPaper00066110:Doxorubicin_upregulated_diploid
WBPaper00066110:tetraploid_vs_diploid_upregulated
WBPaper00066232:hsf-1(RNAi)_upregulated_WT
cgc4489_group_5
WBPaper00025032:cluster_59
WBPaper00025141:unc-4::GFP_Expressed_Genes
WBPaper00026929:Resveratrol_regulated_daf-16
WBPaper00026929:sir-2.1_overexpression_regulated
WBPaper00029437:dcr-1_upregulated
WBPaper00030839:Larval_A_Class
WBPaper00030839:Larval_Pan_Neuronal
WBPaper00031003:0hr_muscle_depleted
WBPaper00031003:total_muscle_depleted
WBPaper00031532:Larva_Pan_Neuronal_Enriched
WBPaper00032948:FedUp
WBPaper00036286:Pattern_G
WBPaper00041939:control_vs_UVC-EtBr-exposed_48h
WBPaper00041939:control_vs_UVC-EtBr-exposed_51h
WBPaper00041939:control_vs_UVC-exposed_51h
WBPaper00041939:UVC-EtBr-exposed_vs_EtBr-exposed_51h
WBPaper00042274:tbx-2(bx59)_upregulated
WBPaper00042331:a-SWCNTs_downregulated
WBPaper00045960:L1-L4-lethargus_upregulated
WBPaper00045960:L4-lethargus_upregulated
WBPaper00046548:dafachronic-acid_downregulated
WBPaper00048989:N2_allantoin_downregulated
WBPaper00057098:SiO2-nanoparticles_upregulated
InteractionWBInteraction000030854
WBInteraction000275279
WBInteraction000453083
Map_infoPositivePositive_cloneC04A11Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionX14.0999
MethodGene