WormBase Tree Display for Gene: WBGene00011937
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| WBGene00011937 | SMap | S_parent | Sequence | T22H6 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | ilc-17.1 | Person_evidence | WBPerson724 | |||||
| Sequence_name | T22H6.1 | ||||||||
| Molecular_name | T22H6.1 | ||||||||
| T22H6.1.1 | |||||||||
| CE42221 | |||||||||
| Other_name | CELE_T22H6.1 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | ilc-17.1 | ||||||||
| DB_info | Database | AceView | gene | XN384 | |||||
| WormQTL | gene | WBGene00011937 | |||||||
| WormFlux | gene | WBGene00011937 | |||||||
| NDB | locus_tag | CELE_T22H6.1 | |||||||
| NCBI | gene | 188767 | |||||||
| RefSeq | protein | NM_077730.4 | |||||||
| SwissProt | UniProtAcc | Q22687 | |||||||
| TREEFAM | TREEFAM_ID | TF353702 | |||||||
| UniProt_GCRP | UniProtAcc | Q22687 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:53 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 12 Jan 2017 17:01:27 | WBPerson2970 | Name_change | CGC_name | ilc-17.1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | ilc | ||||||||
| Allele (47) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00076033 | ||||||||
| 00076034 | |||||||||
| 00076035 | |||||||||
| 00076036 | |||||||||
| 00076037 | |||||||||
| 00076038 | |||||||||
| 00119139 | |||||||||
| 00119140 | |||||||||
| Ortholog (28) | |||||||||
| Paralog | WBGene00016639 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Structured_description | Automated_description | Predicted to enable cytokine activity. Involved in positive regulation of locomotion and response to oxygen levels. Located in extracellular region. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T22H6.1 | |||||||
| Corresponding_CDS_history | T22H6.1:wp188 | ||||||||
| Corresponding_transcript | T22H6.1.1 | ||||||||
| Other_sequence (13) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00053868 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00019046 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1012430 | ||||||||
| Expr1157417 | |||||||||
| Regulate_expr_cluster | WBPaper00059609:malt-1_ilc-17.1_nfki-1_downregulated | ||||||||
| WBPaper00059609:malt-1_ilc-17.1_nfki-1_upregulated | |||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster | WBPaper00038438:E.faecalis_24hr_upregulated_TilingArray | ||||||||
| WBPaper00040560:hpl-2_embryo_downregulated | |||||||||
| WBPaper00042477:rsr-2(RNAi)_downregulated_TilingArray | |||||||||
| WBPaper00048988:neuron_expressed | |||||||||
| WBPaper00050370:dpy-21(e428)_L3_upregulated | |||||||||
| WBPaper00050488:adult_vs_dauer_regulated_N2_20C | |||||||||
| WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_dauer_20C | |||||||||
| WBPaper00050488:N2_vs_mir-34(gk437)_regulated_dauer_20C | |||||||||
| WBPaper00055354:Rapamycin-Psora-Allantoin_downregulated | |||||||||
| WBPaper00055354:Rapamycin-Rifampicin-Psora_downregulated | |||||||||
| WBPaper00058598:mex-1(or286)_upregulated | |||||||||
| WBPaper00058598:spn-4(tm291)_upregulated | |||||||||
| WBPaper00060459:bcat-1(RNAi)_upregulated | |||||||||
| WBPaper00061527:srj-42-srw-113 | |||||||||
| WBPaper00061902:camt-1(ok515)_regulated_AFD | |||||||||
| WBPaper00062103:neuron_enriched | |||||||||
| WBPaper00062325:muscle_depleted_coding-RNA | |||||||||
| WBPaper00062585:hlh-26(ok1453)_downregulated_E.faecium | |||||||||
| WBPaper00065841:66_0 | |||||||||
| Interaction (83) | |||||||||
| Map_info | Map | X | Position | 8.38426 | |||||
| Positive | Positive_clone | T22H6 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00050664 | ||||||||
| WBPaper00059609 | |||||||||
| WBPaper00060770 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
