WormBase Tree Display for Gene: WBGene00012329

WBGene00012329 SMap: S_parent: Sequence: W07G1
  Identity: Version: 2
    Name: CGC_name: sre-44 Person_evidence: WBPerson522
      Sequence_name: W07G1.2
      Molecular_name: W07G1.2
        W07G1.2.1
        CE24036
      Other_name: CELE_W07G1.2 Accession_evidence: NDB BX284602
      Public_name: sre-44
    DB_info: Database: AceView gene 2O239
        WormQTL gene WBGene00012329
        WormFlux gene WBGene00012329
        NDB locus_tag CELE_W07G1.2
        Panther gene CAEEL|WormBase=WBGene00012329|UniProtKB=Q9XUK3
          family PTHR47631
        NCBI gene 189279
        RefSeq protein NM_064517.3
        TREEFAM TREEFAM_ID TF316213
        TrEMBL UniProtAcc Q9XUK3
        UniProt_GCRP UniProtAcc Q9XUK3
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:53 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 18 Jan 2005 14:50:06 WBPerson2970 Name_change: CGC_name: sre-44
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: sre
    Allele (118)
    RNASeq_FPKM (74)
    GO_annotation: 00101840
      00101841
      00119473
      00119474
    Ortholog (20)
    Paralog (45)
    Structured_description: Automated_description: Predicted to be involved in sensory perception of chemical stimulus. Predicted to be located in membrane. Expressed in ADLL and ADLR. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: W07G1.2
    Corresponding_transcript: W07G1.2.1
    Associated_feature: WBsf990562
  Experimental_info: RNAi_result: WBRNAi00054955 Inferred_automatically: RNAi_primary
      WBRNAi00036362 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr6852
      Expr14045
      Expr1017304
      Expr1158489
      Expr2016296
      Expr2034522
    Drives_construct: WBCnstr00003711
      WBCnstr00029996
    Construct_product: WBCnstr00029996
    Microarray_results (19)
    Expression_cluster: WBPaper00033065:cyc-1(RNAi)_upregulated
      WBPaper00037950:bodywall-muscle_L1-larva_expressed
      WBPaper00037950:bodywall-muscle_L2-larva_expressed
      WBPaper00037950:coelomocytes_L2-larva_expressed
      WBPaper00037950:excretory-cell_L2-larva_expressed
      WBPaper00037950:GABAergic-motor-neurons_L2-larva_expressed
      WBPaper00037950:germline-precursors_blastula-embryo_expressed
      WBPaper00037950:glr-1(+)-neurons_L2-larva_expressed
      WBPaper00037950:hypodermis_L1-larva_expressed
      WBPaper00037950:intestine_L2-larva_expressed
      WBPaper00038438:E.faecalis_24hr_upregulated_RNAseq
      WBPaper00038438:S.marcescens_24hr_downregulated_TilingArray
      WBPaper00038438:S.marcescens_24hr_upregulated_RNAseq
      WBPaper00042477:rsr-2(RNAi)_upregulated_TilingArray
      WBPaper00045417:128Q-huntingtin_upreglated
      WBPaper00046805:csr-1(RNAi)_upregulated_Set1
      WBPaper00050488:20C_vs_25C_regulated_mir-34(gk437)_adult
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00050488:N2_vs_mir-34(OverExpression)_regulated_adult_25C
      WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
      WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day2-adult
      WBPaper00053302:stavudine_24h_regulated
      WBPaper00053402:his-3(RNAi)_upregulated
      WBPaper00053888:drh-3(rrr2)_upregulated
      WBPaper00054493:hpl-2(tm1489)_downregulated
      WBPaper00055013:spt-16(RNAi)_upregulated
      WBPaper00055354:eat-2(ad1116)_downregulated
      WBPaper00055354:Rapamycin-Psora-Allantoin_downregulated
      WBPaper00055354:Rapamycin-Rifampicin-Allantoin_downregulated
      WBPaper00055354:Rapamycin-Rifampicin-Psora_downregulated
      WBPaper00055354:Rapamycin-Rifampicin_downregulated
      WBPaper00055354:Rifampicin-Psora_downregulated
      WBPaper00055386:daf-2(e1370)_downregulated
      WBPaper00055941:nuo-6(qm200);atfs-1(gk3094)_upregulated
      WBPaper00056809:smn-1(ok355)_upregulated
      WBPaper00058598:mex-3(eu149)_downregulated
      WBPaper00058691:set-2(bn129)_upregulated
      WBPaper00058691:sin-3(tm1276)_upregulated
      WBPaper00058948:PA14_downregulated
      WBPaper00058955:heatshock_upregulated_CE
      WBPaper00059191:hsp-16.2p-LIN-29_upregulated
      WBPaper00059328:mrps-5(RNAi)_downregulated_mRNA
      WBPaper00060014:set-2(tm1630)_upregulated
      WBPaper00060661:sensory-neuron_enriched
      WBPaper00061274:microgravity_upregulated
      WBPaper00061357:mett-10(ok2204)_downregulated_OP50
      WBPaper00061479:hda-1(ne4752)_upregulated
      WBPaper00061527:srj-42-srw-113
      WBPaper00062103:neuron_enriched
      WBPaper00064509:static-magnetic-field_downregulated
      WBPaper00065315:mating_upregulated_Day2-7
      WBPaper00065581:hpk-1(pk1393)_downregulated
      WBPaper00025141:N2_Expressed_Genes
      WBPaper00032062:age_regulated_genes
      WBPaper00036123:Fluoranthene_regulated
      WBPaper00036286:Pattern_F
      WBPaper00041174:environmental
      WBPaper00041174:genotypic
      WBPaper00041174:genotypic_and_environmental
      WBPaper00045294:0.1uM_TBBP_downregulated
      WBPaper00045807:microcystin-LR_downregulated
      WBPaper00048989:N2_allantoin_upregulated
      WBPaper00055899:nitroguanidine_regulated
      [cgc5376]:let-60(G12V)-regulated_genes
      [cgc6390]:intrinsic
    Interaction: WBInteraction000283730
      WBInteraction000294376
  Map_info: Map: II Position: 21.4663 Error: 0.030175
    Positive: Positive_clone: W07G1 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene