WormBase Tree Display for Gene: WBGene00013666

WBGene00013666 SMap: S_parent: Sequence: Y105E8A
  Identity: Version: 1
    Name: Sequence_name: Y105E8A.1
      Molecular_name: Y105E8A.1a
        Y105E8A.1a.1
        CE36221
        Y105E8A.1b
        CE47848
        Y105E8A.1b.1
      Other_name: yrs-2 Accession_evidence: EMBL AB096636
        Y105E8A.b Curator_confirmed: WBPerson1983
          Remark: Old cosmid naming mapped via unique overlapping PCR_product on CDSs
        CELE_Y105E8A.1 Accession_evidence: NDB BX284601
      Public_name: Y105E8A.1
    DB_info: Database: AceView gene 1O932
        WormQTL gene WBGene00013666
        WormFlux gene WBGene00013666
        NDB locus_tag CELE_Y105E8A.1
        Panther gene CAEEL|WormBase=WBGene00013666|UniProtKB=K8ES47
          family PTHR12232
        NCBI gene 260216
        RefSeq protein NM_001276664.4
            NM_170933.4
        TrEMBL UniProtAcc K8ES47
            Q9NF23
        UniProt_GCRP UniProtAcc K8ES47
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:55 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (83)
    Strain: WBStrain00002582
    RNASeq_FPKM (74)
    GO_annotation: 00024094
    Ortholog (35)
    Structured_description: Automated_description: Predicted to be located in cytoplasm. Expressed in head and intestine. Is an ortholog of human SH3BGR (SH3 domain binding glutamate rich protein). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: Y105E8A.1a
      Y105E8A.1b
    Corresponding_CDS_history: Y105E8A.1:wp114
    Corresponding_transcript: Y105E8A.1a.1
      Y105E8A.1b.1
    Other_sequence (26)
    Associated_feature: WBsf986142
      WBsf220600
  Experimental_info: RNAi_result: WBRNAi00036485 Inferred_automatically: RNAi_primary
      WBRNAi00055212 Inferred_automatically: RNAi_primary
    Expr_pattern: Chronogram423
      Expr6871
      Expr1019392
      Expr1158747
      Expr2006967
      Expr2025189
    Drives_construct: WBCnstr00003141
    Microarray_results (19)
    Expression_cluster: WBPaper00036375:enriched_in_PVD_OLL
      WBPaper00037950:A-class-motor-neurons_L2-larva_expressed
      WBPaper00037950:A-class-motor-neurons_larva_enriched
      WBPaper00037950:all-neurons_L2-larva_expressed
      WBPaper00037950:AVE-neuron_embryo_enriched
      WBPaper00037950:bodywall-muscle_L2-larva_expressed
      WBPaper00037950:CEP-sheath-cells_Day1-adult_expressed
      WBPaper00037950:GABAergic-motor-neurons_embryo_enriched
      WBPaper00037950:GABAergic-motor-neurons_L1-larva_expressed
      WBPaper00037950:GABAergic-motor-neurons_L2-larva_expressed
      WBPaper00037950:glr-1(+)-neurons_L2-larva_expressed
      WBPaper00037950:PVD-OLL-neurons_L3-L4-larva_expressed
      WBPaper00038438:E.faecalis_24hr_upregulated_TilingArray
      WBPaper00038438:P.lumniescens_24hr_upregulated_TilingArray
      WBPaper00040221:DAF-12_target_ALF4
      WBPaper00044736:flat_dev_expression
      WBPaper00044786:emr-1(RNAi);lem-2(tm1582)_upregulated
      WBPaper00045974:NSM_enriched_totalRNA_tiling
      WBPaper00048923:Aging_regulated
      WBPaper00048988:neuron_enriched
      WBPaper00048988:neuron_expressed
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_dauer_20C
      WBPaper00050488:N2_vs_mir-34(gk437)_regulated_dauer_20C
      WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
      WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day2-adult
      WBPaper00050990:GABAergic-neuron_expressed
      WBPaper00050990:hypodermis_expressed
      WBPaper00050990:NMDA-neuron_expressed
      WBPaper00050990:pharynx_expressed
      WBPaper00053184:sma-2(rax5)_upregulated
      WBPaper00053184:sma-4(rax3)_upregulated
      WBPaper00053295:lin-22(icb38)_upregulated
      WBPaper00053295:lin-22(ot269)_upregulated
      WBPaper00053308:SMG-2_associated_NMD(-)_unaltered_ClassII
      WBPaper00053388:dauer_regulated_Cluster5
      WBPaper00053664:ins-11(tm1053)_downregulated
      WBPaper00055354:Psora-Allantoin_downregulated
      WBPaper00055354:Psora_downregulated
      WBPaper00055354:Rapamycin-Allantoin_downregulated
      WBPaper00055354:Rapamycin-Metformin_downregulated
      WBPaper00055354:Rifampicin-Allantoin_downregulated
      WBPaper00055354:Rifampicin_downregulated
      WBPaper00055565:AVK_enriched
      WBPaper00055971:nhl-2(ok818)_25C_downregulated
      WBPaper00056326:zip-3(gk3164)_upregulated_P.aeruginosa-infected
      WBPaper00056443:sek-1(km4)_upregulated
      WBPaper00056826:hmc_biased
      WBPaper00058598:mex-1(or286)_upregulated
      WBPaper00058598:mex-3(eu149)_upregulated
      WBPaper00058598:sin-3(tm1276)_downregulated
      WBPaper00058958:100mGy-irradiation-72h_upregulated
      WBPaper00059027:neuron-synapses_depleted
      WBPaper00059471:EGL-43_interacting
      WBPaper00059566:wdr-23(mac32)_upregulated
      WBPaper00059609:malt-1_ilc-17.1_nfki-1_upregulated
      WBPaper00059664:srbc-48(ac23)_upregulated
      WBPaper00060459:bcat-1(RNAi)_upregulated
      WBPaper00060661:sensory-neuron_enriched
      WBPaper00061203:sin-3(tm1276)_upregulated
      WBPaper00061340:Glia
      WBPaper00061357:mett-10(ok2204)_downregulated_NA22
      WBPaper00061479:mep-1(ne4629)_upregulated
      WBPaper00061527:tub-2_4713-daf-2_5288
      WBPaper00061995:mter-4(syb3662syb3403)_downregulated
      WBPaper00062103:neuron_enriched
      WBPaper00062159:hda-2(ok1479)_upregulated
      WBPaper00062325:muscle_enriched_coding-RNA
      WBPaper00064005:starvation_upregulated_N2_mRNA
      WBPaper00064071:NHR-49_interacting
      WBPaper00064088:Day-1-adult_vs_L4_downregulated_fem-3(q20)
      WBPaper00064088:Day-3-adult_vs_L4_downregulated_daf-16(mu86);glp-1(e2141)
      WBPaper00064088:Day-3-adult_vs_L4_downregulated_fem-3(q20)
      WBPaper00064721:fasn-1(g14)_downregulated_starved
      WBPaper00065096:Day10_vs_Day1_downregulated
      WBPaper00065158:AFD_enriched
      WBPaper00065581:hpk-1(pk1393)_upregulated
      WBPaper00065841:6_1
      WBPaper00065841:6_3
      WBPaper00065841:14_0
      WBPaper00065841:14_2
      WBPaper00065841:29_0
      WBPaper00065841:55_0
      WBPaper00065975:P-body_vs_WholeAnimal_depleted
      WBPaper00065993:glp-1(e2141)_upregulated
      WBPaper00066110:tetraploid_vs_diploid_upregulated
      WBPaper00066232:ash-2(RNAi)_downregulated_WT
      WBPaper00031252:AIN-2_IP_enriched
      WBPaper00041939:control_vs_UVC-EtBr-exposed_48h
      WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_48h
    Interaction: WBInteraction000032031
      WBInteraction000509623
      WBInteraction000569652
  Map_info: Positive: Positive_clone: Y105E8A Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: I 24.4237
  Reference: WBPaper00038491
    WBPaper00055090
  Method: Gene