WormBase Tree Display for Gene: WBGene00016215

WBGene00016215 SMap: S_parent: Sequence: C29F5
  Identity: Version: 2
    Name: CGC_name: glb-10 Paper_evidence: WBPaper00031066
          Person_evidence: WBPerson1540
      Sequence_name: C29F5.7
      Molecular_name: C29F5.7
        C29F5.7.1
        CE02514
      Other_name: CELE_C29F5.7 Accession_evidence: NDB BX284602
      Public_name: glb-10
    DB_info: Database: AceView gene 2G596
        WormQTL gene WBGene00016215
        WormFlux gene WBGene00016215
        NDB locus_tag CELE_C29F5.7
        NCBI gene 183015
        RefSeq protein NM_062867.4
        TrEMBL UniProtAcc Q18311
        UniProt_GCRP UniProtAcc Q18311
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:57 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 22 Oct 2007 15:16:41 WBPerson2970 Name_change: CGC_name: glb-10
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: glb
    Allele (23)
    RNASeq_FPKM (74)
    GO_annotation: 00060892
      00060893
      00060894
      00121888
      00121889
    Ortholog (26)
    Paralog (15)
    Structured_description: Concise_description: glb-10 encodes a globin; glb-10 is expressed in pharynx, intestine, vulval muscle, and many neurons, with at least some subcellular localization to synapses. Paper_evidence: WBPaper00025067
            WBPaper00026667
            WBPaper00031066
          Curator_confirmed: WBPerson1843
            WBPerson567
          Date_last_updated: 24 May 2010 00:00:00
      Automated_description: Predicted to enable heme binding activity; oxygen binding activity; and oxygen carrier activity. Predicted to be involved in oxygen transport. Located in plasma membrane. Expressed in several structures, including excretory cell; gonad; neurons; non-striated muscle; and somatic nervous system. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C29F5.7
    Corresponding_transcript: C29F5.7.1
    Other_sequence: Dviv_isotig24298
      Acan_isotig11118
      EY468085.1
      Oden_isotig22342
      ACC11530_1
    Associated_feature: WBsf988131
      WBsf988132
      WBsf1012361
      WBsf223148
      WBsf223149
      WBsf223150
      WBsf223151
  Experimental_info: RNAi_result: WBRNAi00029326 Inferred_automatically: RNAi_primary
      WBRNAi00060922 Inferred_automatically: RNAi_primary
      WBRNAi00081183 Inferred_automatically: RNAi_primary
      WBRNAi00060923 Inferred_automatically: RNAi_primary
      WBRNAi00011344 Inferred_automatically: RNAi_primary
      WBRNAi00060921 Inferred_automatically: RNAi_primary
      WBRNAi00041477 Inferred_automatically: RNAi_primary
      WBRNAi00060924 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr3536
      Expr3550
      Expr8490
      Expr9443
      Expr1015191
      Expr1145504
      Expr2012045
      Expr2030281
    Drives_construct: WBCnstr00011460
      WBCnstr00013319
      WBCnstr00028241
    Construct_product: WBCnstr00011474
      WBCnstr00014008
      WBCnstr00028241
    Microarray_results (19)
    Expression_cluster: WBPaper00037950:A-class-motor-neurons_L2-larva_expressed
      WBPaper00037950:all-neurons_L2-larva_expressed
      WBPaper00037950:all-neurons_larva_enriched
      WBPaper00037950:all-neurons_larva_SelectivelyEnriched
      WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed
      WBPaper00037950:dopaminergic-neurons_larva_enriched
      WBPaper00037950:dopaminergic-neurons_larva_SelectivelyEnriched
      WBPaper00037950:excretory-cell_L2-larva_expressed
      WBPaper00037950:GABAergic-motor-neurons_L2-larva_expressed
      WBPaper00037950:glr-1(+)-neurons_L2-larva_expressed
      WBPaper00037950:glr-1(+)-neurons_larva_enriched
      WBPaper00037950:glr-1(+)-neurons_larva_SelectivelyEnriched
      WBPaper00037950:PVD-OLL-neurons_L3-L4-larva_expressed
      WBPaper00038438:E.faecalis_24hr_upregulated_TilingArray
      WBPaper00038438:Harposporium_24hr_upregulated_RNAseq
      WBPaper00038438:P.lumniescens_24hr_upregulated_TilingArray
      WBPaper00044037:eat-2_upregulated
      WBPaper00044426:rotenone_24h_upregulated
      WBPaper00044578:reduced-humidity_downregulated_microarray
      WBPaper00044656:tatn-1(qd182)_upregulated
      WBPaper00044736:flat_dev_expression
      WBPaper00044786:emr-1(RNAi);lem-2(tm1582)_upregulated
      WBPaper00048988:neuron_enriched
      WBPaper00048988:neuron_expressed
      WBPaper00050488:20C_vs_25C_regulated_N2_adult
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_dauer_20C
      WBPaper00050496:RID_enriched
      WBPaper00050496:unc-39(hp701)_regulated
      WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
      WBPaper00050990:arcade_intestinal-valve_expressed
      WBPaper00050990:GABAergic-neuron_expressed
      WBPaper00050990:intestine_expressed
      WBPaper00050990:NMDA-neuron_expressed
      WBPaper00050990:seam_expressed
      WBPaper00053184:sma-2(rax5)_upregulated
      WBPaper00053184:sma-4(rax3)_upregulated
      WBPaper00053388:dauer_regulated_Cluster4
      WBPaper00054758:alg-1(gk204)_upregulated
      WBPaper00055354:Psora-Allantoin_downregulated
      WBPaper00055354:Rapamycin-Metformin_downregulated
      WBPaper00055354:Rapamycin-Psora-Allantoin_downregulated
      WBPaper00055354:Rapamycin-Rifampicin_downregulated
      WBPaper00055354:Rifampicin-Allantoin_downregulated
      WBPaper00055354:Rifampicin-Psora_downregulated
      WBPaper00055354:Rifampicin_downregulated
      WBPaper00056731:human-amylin_downregulated
      WBPaper00058598:mex-1(or286)_upregulated
      WBPaper00058598:mex-3(eu149)_upregulated
      WBPaper00058598:sin-3(tm1276)_upregulated
      WBPaper00058711:paraquat_downregulated
      WBPaper00058711:skn-1(lax188)_upregulated
      WBPaper00058969:RIS_enriched
      WBPaper00059027:neuron-synapses_depleted
      WBPaper00059609:malt-1_ilc-17.1_nfki-1_downregulated
      WBPaper00059664:srbc-48(ac23)_upregulated
      WBPaper00059763:neuron_acr-2(n2420gf)_regulated
      WBPaper00059824:rnp-6(dh1127)_regulated_S.aureus
      WBPaper00060459:bcat-1(RNAi)_upregulated
      WBPaper00060661:sensory-neuron_enriched
      WBPaper00060811:L1_vs_adult_upregulated_neural
      WBPaper00061203:sin-3(tm1276)_downregulated
      WBPaper00061274:hypergravity_15xg_downregulated
      WBPaper00061340:AVE
      WBPaper00061340:AVJ
      WBPaper00061340:pm8
      WBPaper00061340:RIH
      WBPaper00061357:mett-10(ok2204)_downregulated_OP50
      WBPaper00061439:unc-30(ok613)_downregulated
      WBPaper00061466:nath-10(icb99)_downregulated
      WBPaper00061479:hda-1(ne4752)_upregulated
      WBPaper00061527:T16H12.9-kin-9_20752
      WBPaper00061651:AQR_enriched
      WBPaper00061651:AVA_enriched
      WBPaper00061651:AVG_enriched
      WBPaper00061651:AVH_enriched
      WBPaper00061651:DVC_enriched
      WBPaper00061651:HSN_enriched
      WBPaper00061651:IL2_LR_enriched
      WBPaper00061651:PVN_enriched
      WBPaper00061651:RID_enriched
      WBPaper00061651:RIG_enriched
      WBPaper00061651:RMG_enriched
      WBPaper00061651:SMB_enriched
      WBPaper00062103:neuron_enriched
      WBPaper00062159:hda-2(ok1479)_upregulated
      WBPaper00062325:muscle_depleted_coding-RNA
      WBPaper00062520:qui-1(db104)_upregulated
      WBPaper00064088:Day-3-adult_vs_L4_downregulated_fem-3(q20)
      WBPaper00064716:paraquat_downregulated
      WBPaper00065096:Day10_vs_Day1_downregulated
      WBPaper00065749:Heat-Shock_downregulated_N2
      WBPaper00065841:17_0
      WBPaper00065841:22_0
      WBPaper00065841:39_3
      WBPaper00065841:49_0
      WBPaper00065841:61_0
      WBPaper00065841:66_0
      WBPaper00065841:108_0
      WBPaper00065841:111_0
      WBPaper00065841:114_0
      WBPaper00065841:122_0
      WBPaper00065841:123_0
      WBPaper00065841:129_0
      WBPaper00065841:131_0
      WBPaper00065841:142_0
      WBPaper00065993:glp-1(e2141)_upregulated
      WBPaper00066062:xrep-4(lax137)_upregulated
      WBPaper00036286:Pattern_I
      WBPaper00037695:WC_5-day
      WBPaper00040858:eQTL_age_regulated_aging
      WBPaper00040858:eQTL_age_regulated_developing
      WBPaper00040858:eQTL_regulated_developing
      WBPaper00041174:genotypic
      WBPaper00041174:genotypic_prime
      WBPaper00047070:N2_starvation_upregulated
      WBPaper00047070:xpa-1_UV_downregulated
      WBPaper00048989:N2_rapamycin_upregulated
      WBPaper00053236:Starvation_regulated_GR1307
    Interaction (17)
  Map_info: Map: II Position: -0.384 Error: 0.000779
    Positive: Positive_clone: C29F5 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00031066
    WBPaper00034662
    WBPaper00038444
    WBPaper00061065
    WBPaper00064863
    WBPaper00065135
    WBPaper00065693
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene