WormBase Tree Display for Gene: WBGene00016502

WBGene00016502 SMap: S_parent: Sequence: C37C3
  Identity: Version: 1
    Name: Sequence_name: C37C3.10
      Molecular_name: C37C3.10
        C37C3.10.1
        CE06935
      Other_name: CELE_C37C3.10 Accession_evidence: NDB BX284605
      Public_name: C37C3.10
    DB_info: Database: AceView gene 5I340
        WormQTL gene WBGene00016502
        WormFlux gene WBGene00016502
        NDB locus_tag CELE_C37C3.10
        NCBI gene 183290
        RefSeq protein NM_072625.3
        TrEMBL UniProtAcc Q22920
        UniProt_GCRP UniProtAcc Q22920
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:57 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (24)
    RNASeq_FPKM (74)
    Ortholog: WBGene00212985 Caenorhabditis japonica From_analysis: Inparanoid_8
      chrV_pilon.g14840 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Automated_description: Enriched in intestine based on tiling array studies. Is affected by several genes including daf-16; daf-2; and eat-2 based on microarray and RNA-seq studies. Is affected by eighteen chemicals including tryptophan; Tunicamycin; and mianserin based on microarray and RNA-seq studies. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C37C3.10
    Corresponding_transcript: C37C3.10.1
    Associated_feature: WBsf234000
  Experimental_info: RNAi_result: WBRNAi00042103 Inferred_automatically: RNAi_primary
      WBRNAi00011713 Inferred_automatically: RNAi_primary
      WBRNAi00029633 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1018899
      Expr1146103
      Expr2001494
      Expr2019715
    Drives_construct: WBCnstr00028014
    Construct_product: WBCnstr00028014
    Microarray_results (16)
    Expression_cluster: WBPaper00037950:all-neurons_L1-larva_expressed
      WBPaper00037950:bodywall-muscle_L2-larva_expressed
      WBPaper00037950:CEP-sheath-cells_Day1-adult_expressed
      WBPaper00037950:coelomocytes_L1-larva_expressed
      WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed
      WBPaper00037950:excretory-cell_L2-larva_expressed
      WBPaper00037950:GABAergic-motor-neurons_L1-larva_expressed
      WBPaper00037950:hypodermis_L1-larva_expressed
      WBPaper00037950:intestine_L2-larva_expressed
      WBPaper00037950:intestine_larva_enriched
      WBPaper00037950:intestine_larva_SelectivelyEnriched
      WBPaper00037950:PVD-OLL-neurons_L3-L4-larva_expressed
      WBPaper00038438:E.faecalis_24hr_upregulated_RNAseq
      WBPaper00038438:P.lumniescens_24hr_upregulated_RNAseq
      WBPaper00038438:S.marcescens_24hr_upregulated_RNAseq
      WBPaper00038438:S.marcescens_24hr_upregulated_TilingArray
      WBPaper00042194:Tryptophan_upregulated
      WBPaper00042561:smg-2(RNAi)_upregulated
      WBPaper00042561:smgl-1(RNAi)_upregulated
      WBPaper00044030:nhr-8(hd117)_upregulated
      WBPaper00044578:reduced-humidity_downregulated_microarray
      WBPaper00045316:prg-1_upregulated_L1
      WBPaper00045390:tunicamycin_downregulated
      WBPaper00046497:B.thuringiensis_0.1mix_upregulated_6h
      WBPaper00046497:B.thuringiensis_0.1mix_upregulated_12h
      WBPaper00046497:B.thuringiensis_0.5mix_upregulated_6h
      WBPaper00046497:B.thuringiensis_0.5mix_upregulated_12h
      WBPaper00048926:miaserin_upregulated_adult-day3
      WBPaper00049134:hpk-1(pk1393)_upregulated
      WBPaper00049498:npr-1(ur89)_regulated_2
      WBPaper00049920:Glucose-Diet_downregulated_hyl-2(tm2031)
      WBPaper00050370:dpy-21(e428)_L3_upregulated
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00050504:hrp-2(RNAi)_upregulated
      WBPaper00050561:indole_0.1mM-indole_upregulated
      WBPaper00050561:indole_10-fold_upregulated
      WBPaper00051404:alg-1(gk214)_downregulated
      WBPaper00051404:alg-2(ok304)_downregulated
      WBPaper00051404:alg-5(ram2)_downregulated
      WBPaper00052884:emb-4(hc60)_upregulated
      WBPaper00053388:dauer_regulated_Cluster3
      WBPaper00053402:his-3(RNAi)_upregulated
      WBPaper00053771:up_at_24h-NaCl
      WBPaper00053888:drh-3(rrr2)_upregulated
      WBPaper00053909:N2_vs_CB4856_upregulated
      WBPaper00054493:hpl-2(tm1489)_downregulated
      WBPaper00054872:egl-9(sa307)_upregulated
      WBPaper00055060:flr-1(RNAi)_downregulated
      WBPaper00055354:eat-2(ad1116)_downregulated
      WBPaper00055354:Psora-Allantoin_downregulated
      WBPaper00055354:Psora_downregulated
      WBPaper00055354:Rapamycin-Rifampicin_downregulated
      WBPaper00055354:Rapamycin_upregulated
      WBPaper00055354:Rifampicin-Allantoin_downregulated
      WBPaper00055354:Rifampicin-Psora_downregulated
      WBPaper00055354:Rifampicin_downregulated
      WBPaper00055386:daf-2(e1370)_downregulated
      WBPaper00055626:pry-1(mu38)_downregulated
      WBPaper00055971:nhl-2(ok818)_20C_downregulated
      WBPaper00055971:nhl-2(ok818)_25C_downregulated
      WBPaper00056167:Cry5B_downregulated
      WBPaper00056471:flcn-1(ok975)_upregulated
      WBPaper00056550:ceh-60(ok1485)_upregulated_AdultDay1
      WBPaper00057041:unc-70(cas983)_upregulated
      WBPaper00057068:Cadmium_upregulated
      WBPaper00057068:ints-4(RNAi)_upregulated
      WBPaper00057068:numr-1(RNAi)_upregulated_Cadmium
      WBPaper00057143:ztf-11(RNAi)_upregulated
      WBPaper00057196:raga-1(ok386)_upregulated)
      WBPaper00058948:npr-8(ok1439)_upregulated_PA14
      WBPaper00058948:PA14_downregulated
      WBPaper00058958:10mGy-irradiation-72h_upregulated
      WBPaper00058969:RIS_depleted
      WBPaper00059895:wounding_upregulated
      WBPaper00059987:Wounding_upregulated
      WBPaper00060358:B.thuringiensis_pathogen_regulated_elt-2(RNAi)
      WBPaper00060358:B.thuringiensis_pathogen_regulated_N2
      WBPaper00060399:CoCl2_6hr_upregulated_N2
      WBPaper00060634:fhod-1(tm2363)_downregulated
      WBPaper00061341:28C_24h_upregulated
      WBPaper00061527:snt-4_17845-T27C4.1
      WBPaper00061530:nhr-49(e2144)_upregulated
      WBPaper00061636:atracurium_downregulated
      WBPaper00061753:csr-1(tor159)_upregulated_25C
      WBPaper00061853:tunicamycin_downregulated_N2
      WBPaper00062167:mbl-1(tm1563)_upregulated
      WBPaper00062193:daf-16(RNAi)_upregulated
      WBPaper00062446:nhr-8(hd117)_upregulated
      WBPaper00064229:B.thuringiensis-Cry5Ba_downregulated
      WBPaper00064661:lpd-3(ok2138)_upregulated
      WBPaper00064762:freezing-thaw_regulated
      WBPaper00064769:him-17(me24)_upregulated
      WBPaper00064871:PA14_upregulated_AWA
      WBPaper00064933:bcf-1(ylf1)_upregulated_transcript
      WBPaper00065086:N2_N.ausubeli_regulated
      WBPaper00065086:N2_N.ferruginous_regulated
      WBPaper00065158:25C_vs_15C_downregulated_WholeAnimal
      WBPaper00065392:P.pentosaceus_upregulated
      WBPaper00065734:unc-25(e156)_upregulated
      WBPaper00065877:rege-1(imm070)_upregulated_OP50
      WBPaper00065926:pgph-2(overepxreesion)_upregulated
      WBPaper00065984:pals-17(syb3980)_upregulated
      WBPaper00066110:tetraploid_vs_diploid_upregulated
      WBPaper00066204:CdCl2_upregulated_mRNA
      cgc4489_group_13
      WBPaper00006465:II_ethanol_late_induction
      WBPaper00026929:Resveratrol_regulated_daf-16
      WBPaper00031532:Larva_Pan_Neuronal_Depleted
      WBPaper00032948:FedUp
      WBPaper00038231:Cry5B_1.5-fold_upregulated
      WBPaper00038231:Cry5B_2-fold_upregulated
      WBPaper00040116:pRJ-FR.5_down_regulated
      WBPaper00040858:eQTL_age_regulated_aging
      WBPaper00040858:eQTL_regulated_aging
      WBPaper00040858:eQTL_regulated_reproductive
      WBPaper00041002:HF_3d_0.2mM_Up
      WBPaper00041606:CE_S.marcescens_regulated
      WBPaper00042067:Cu2+_upregulated_kgb-1_top50
      WBPaper00042067:Cu2+_upregulated_kgb-1_top66
      WBPaper00042067:Cu2+_upregulated_WT
      WBPaper00045960:L4-lethargus_upregulated
      WBPaper00046083:oga-1(ok1207)_OP50_downregulated
      WBPaper00046083:pmk-1(km25)_OP50_downregulated
      WBPaper00048989:N2_rapamycin_upregulated
    Interaction: WBInteraction000203229
      WBInteraction000311085
      WBInteraction000341622
      WBInteraction000389405
  Map_info: Positive: Positive_clone: C37C3 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: V 0.920281
  Method: Gene