WormBase Tree Display for Gene: WBGene00017157

WBGene00017157 SMap: S_parent: Sequence: F01E11
  Identity: Version: 2
    Name: CGC_name: tyra-2 Person_evidence: WBPerson2227
            WBPerson3043
      Sequence_name: F01E11.5
      Molecular_name: F01E11.5a
        F01E11.5a.1
        CE38313
        F01E11.5b
        CE35711
        F01E11.5c
        CE30931
        F01E11.5b.1
        F01E11.5b.2
        F01E11.5c.1
      Other_name: CELE_F01E11.5 Accession_evidence: NDB BX284606
      Public_name: tyra-2
    DB_info: Database: AceView gene XH616
        WormQTL gene WBGene00017157
        WormFlux gene WBGene00017157
        NDB locus_tag CELE_F01E11.5
        Panther gene CAEEL|WormBase=WBGene00017157|UniProtKB=Q19084
          family PTHR24248
        NCBI gene 180970
        RefSeq protein NM_001038448.5
            NM_001029351.6
            NM_001029350.7
        SwissProt UniProtAcc Q19084
        TREEFAM TREEFAM_ID TF351748
        UniProt_GCRP UniProtAcc Q19084
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:58 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 26 Aug 2005 14:40:50 WBPerson2970 Name_change: CGC_name: tyra-2
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: tyra
    Allele (128)
    RNASeq_FPKM (74)
    GO_annotation (12)
    Ortholog (28)
    Paralog (18)
    Structured_description: Automated_description: Predicted to enable G protein-coupled amine receptor activity. Predicted to be involved in adenylate cyclase-activating adrenergic receptor signaling pathway. Predicted to be located in plasma membrane. Expressed in neurons. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F01E11.5a
      F01E11.5b
      F01E11.5c
    Corresponding_CDS_history: F01E11.5a:wp141
      F01E11.5b:wp109
    Corresponding_transcript: F01E11.5a.1
      F01E11.5b.1
      F01E11.5b.2
      F01E11.5c.1
    Other_sequence: Oden_isotig28023
      JI227792.1
      CJC16133_1
      Oden_isotig29509
      Dviv_isotig25227
      Acan_isotig12515
      JI224343.1
      JI221162.1
    Associated_feature: WBsf654102
      WBsf1005708
      WBsf1005709
      WBsf1023170
      WBsf237539
  Experimental_info: RNAi_result: WBRNAi00072205 Inferred_automatically: RNAi_primary
      WBRNAi00000762 Inferred_automatically: RNAi_primary
      WBRNAi00030535 Inferred_automatically: RNAi_primary
      WBRNAi00012733 Inferred_automatically: RNAi_primary
      WBRNAi00043739 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr2715
      Expr3414
      Expr3415
      Expr12557
      Expr14828
      Expr14829
      Expr1011682
      Expr1147724
      Expr2017691
      Expr2035829
    Drives_construct: WBCnstr00000008
      WBCnstr00011388
      WBCnstr00011389
      WBCnstr00027525
      WBCnstr00041551
    Construct_product: WBCnstr00011389
      WBCnstr00027525
      WBCnstr00041551
    Microarray_results (26)
    Expression_cluster: WBPaper00032031:DConiospora_downregulated_OligoArray_24h
      WBPaper00032976:dosage_compensated_genes
      WBPaper00036375:enriched_in_PVD_OLL
      WBPaper00037950:all-neurons_L1-larva_expressed
      WBPaper00037950:all-neurons_larva_enriched
      WBPaper00037950:BAG-neuron_embryo_enriched
      WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed
      WBPaper00037950:dopaminergic-neurons_larva_enriched
      WBPaper00037950:glr-1(+)-neurons_larva_enriched
      WBPaper00038438:E.faecalis_24hr_upregulated_RNAseq
      WBPaper00038438:Harposporium_24hr_downregulated_RNAseq
      WBPaper00038438:P.lumniescens_24hr_upregulated_TilingArray
      WBPaper00038438:S.marcescens_24hr_upregulated_RNAseq
      WBPaper00042215:wdr-23(tm1817)_upregulated
      WBPaper00044736:flat_dev_expression
      WBPaper00045729:gld-2(RNAi)_upregulated
      WBPaper00045974:NSM_enriched_totalRNA_RNAseq
      WBPaper00048690:gonad-hermaphrodite-biased
      WBPaper00048923:Aging_regulated
      WBPaper00048988:neuron_enriched
      WBPaper00048988:neuron_expressed
      WBPaper00049545:cco-1(RNAi)_upregulated
      WBPaper00049626:UNC-75_target
      WBPaper00050344:AFD-neuron_enriched
      WBPaper00050344:ASER-neuron_enriched
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_dauer_20C
      WBPaper00050488:N2_vs_mir-34(gk437)_regulated_dauer_20C
      WBPaper00050726:OsmoticStress_regulated_Food
      WBPaper00050726:starvation_regulated_LowSalt
      WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
      WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day2-adult
      WBPaper00053295:lin-22(icb38)_upregulated
      WBPaper00055354:Allantoin_upregulated
      WBPaper00055354:Psora_upregulated
      WBPaper00055354:Rapamycin-Psora_upregulated
      WBPaper00055354:Rapamycin-Rifampicin-Allantoin_downregulated
      WBPaper00055354:Rapamycin-Rifampicin_downregulated
      WBPaper00055626:pry-1(mu38)_downregulated
      WBPaper00056809:smn-1(ok355)_upregulated
      WBPaper00056997:nmad-1(ok3133)_upregulated_germline_25C
      WBPaper00057068:ints-4(RNAi)_upregulated
      WBPaper00058598:mex-1(or286)_upregulated
      WBPaper00058598:mex-3(eu149)_upregulated
      WBPaper00058598:spn-4(tm291)_upregulated
      WBPaper00058691:cfp-1(tm6369)_upregulated
      WBPaper00058691:set-2(bn129)_upregulated
      WBPaper00058948:npr-8(ok1439)_downregulated_OP50
      WBPaper00058948:npr-8(ok1439)_downregulated_PA14
      WBPaper00058969:RIS_enriched
      WBPaper00059027:neuron-synapses_depleted
      WBPaper00059328:mrps-5(RNAi)_upregulated_mRNA
      WBPaper00059471:EGL-43_interacting
      WBPaper00059763:neuron_acr-2(n2420gf)_regulated
      WBPaper00060459:bcat-1(RNAi)_upregulated
      WBPaper00060661:sensory-neuron_enriched
      WBPaper00060811:L1_vs_adult_upregulated_neural
      WBPaper00061340:AIA
      WBPaper00061340:AIZ
      WBPaper00061340:AUA
      WBPaper00061340:DVA
      WBPaper00061340:Excretory_duct_and_pore
      WBPaper00061340:Pharyngeal_intestinal_valve
      WBPaper00061340:RIB
      WBPaper00061340:RIC
      WBPaper00061340:SIB
      WBPaper00061357:mett-10(ok2204)_upregulated_OP50
      WBPaper00061479:hda-1(ne4752)_upregulated
      WBPaper00061527:acy-2-F35C5.11
      WBPaper00061651:AIZ_enriched
      WBPaper00061651:DVA_enriched
      WBPaper00061651:PVR_enriched
      WBPaper00061651:RIG_enriched
      WBPaper00061753:csr-1(tor159)_upregulated_25C
      WBPaper00061995:mter-4(syb3662syb3403)_downregulated
      WBPaper00062095:unc-4(e120)_upregulated_VA-neuron
      WBPaper00062103:neuron_enriched
      WBPaper00062156:jmjd-5(zr1234)_downregulated_germline
      WBPaper00062159:hda-2(ok1479)_upregulated
      WBPaper00062325:muscle_depleted_coding-RNA
      WBPaper00062446:nhr-8(hd117)_upregulated
      WBPaper00064088:Day-1-adult_vs_L4_upregulated_glp-1(e2141)
      WBPaper00064088:Day-3-adult_vs_L4_downregulated_fem-3(q20)
      WBPaper00064088:Day-3-adult_vs_L4_upregulated_daf-16(mu86);glp-1(e2141)
      WBPaper00064088:Day-3-adult_vs_L4_upregulated_glp-1(e2141)
      WBPaper00064315:mes-4(bn73)_upregulated_EGCs
      WBPaper00064509:static-magnetic-field_downregulated
      WBPaper00065158:AFD_enriched
      WBPaper00065749:Heat-Shock_downregulated_endu-2(tm4977)
      WBPaper00065841:35_2
      WBPaper00065841:60_0
      WBPaper00065841:70_1
      WBPaper00065841:80_0
      WBPaper00065841:83_0
      WBPaper00065841:85_0
      WBPaper00065841:87_0
      WBPaper00065841:90_0
      WBPaper00065841:92_0
      WBPaper00065841:97_0
      WBPaper00065841:103_0
      WBPaper00065841:104_0
      WBPaper00065841:112_0
      WBPaper00065841:114_0
      WBPaper00065841:120_0
      WBPaper00065841:122_0
      WBPaper00065841:124_0
      WBPaper00065841:129_0
      WBPaper00065841:137_0
      WBPaper00065993:glp-1(e2141)_upregulated
      WBPaper00066232:ash-2(RNAi)_downregulated_WT
      cgc4489_group_5
      WBPaper00024671:AFD_AWB_vs_unsorted_upregulated
      WBPaper00025141:N2_Expressed_Genes
      WBPaper00025141:unc-4::GFP_Expressed_Genes
      WBPaper00030839:Embryo_Pan_Neuronal
      WBPaper00030839:Larval_Pan_Neuronal
      WBPaper00031003:0hr_muscle_depleted
      WBPaper00031003:total_muscle_depleted
      WBPaper00031532:Larva_Pan_Neuronal_Enriched
      WBPaper00035588:alg-1(-)_upregulated
      WBPaper00037147:heatshock_upregulated
      WBPaper00041174:environmental
      WBPaper00041174:genotype_environment_interaction
      WBPaper00041174:genotypic
      WBPaper00041174:genotypic_and_environmental
      WBPaper00041267:SpaceFlight_Downregulated
      WBPaper00041939:control_vs_EtBr-exposed_48h
      WBPaper00041939:EtBr-exposed_vs_UVC-exposed_48h
      WBPaper00041939:EtBr-exposed_vs_UVC-exposed_51h
      WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_48h
      WBPaper00042548:miRISC_enriched
      WBPaper00045673:colistin_upregulated
      WBPaper00048989:eat-2(ad465)_rapamycin_downregulated
      WBPaper00053236:Starvation_regulated_GR1307
      WBPaper00053236:Starvation_regulated_N2
    Interaction: WBInteraction000428264
      WBInteraction000455480
  Map_info: Positive: Positive_clone: F01E11 Inferred_automatically: From sequence, transcript, pseudogene data
    Mapping_data: Multi_point: 5477
        4441
    Interpolated_map_position: X -1.92724
    Pseudo_map_position
  Reference (28)
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene