WormBase Tree Display for Gene: WBGene00017959

WBGene00017959 SMap: S_parent: Sequence: F31F4
  Identity: Version: 2
    Name: CGC_name: ugt-42 Person_evidence: WBPerson1208
            WBPerson655
      Sequence_name: F31F4.7
      Molecular_name: F31F4.7
        F31F4.7.1
        CE36837
      Other_name: CELE_F31F4.7 Accession_evidence: NDB BX284605
      Public_name: ugt-42
    DB_info: Database: AceView gene 5B127
        WormQTL gene WBGene00017959
        WormFlux gene WBGene00017959
        NDB locus_tag CELE_F31F4.7
        Panther gene CAEEL|WormBase=WBGene00017959|UniProtKB=O17123
          family PTHR48043
        NCBI gene 185168
        RefSeq protein NM_070877.4
        TREEFAM TREEFAM_ID TF352368
        TrEMBL UniProtAcc O17123
        UniProt_GCRP UniProtAcc O17123
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:59 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 10 Jun 2005 11:17:00 WBPerson2970 Name_change: CGC_name: ugt-42
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: ugt
    Allele (132)
    RNASeq_FPKM (74)
    GO_annotation: 00029359
      00029360
      00029361
      00029362
      00029363
      00029364
      00123221
    Ortholog (52)
    Paralog (74)
    Structured_description: Automated_description: Predicted to enable UDP-glycosyltransferase activity. Predicted to be located in membrane. Is an ortholog of human UGT3A1 (UDP glycosyltransferase family 3 member A1). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F31F4.7
    Corresponding_CDS_history: F31F4.7:wp125
    Corresponding_transcript: F31F4.7.1
    Associated_feature: WBsf231358
  Experimental_info: RNAi_result: WBRNAi00014174 Inferred_automatically: RNAi_primary
      WBRNAi00114470 Inferred_automatically: RNAi_primary
      WBRNAi00046052 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1016024
      Expr1149944
      Expr2017788
    Drives_construct: WBCnstr00026887
    Construct_product: WBCnstr00026887
    Microarray_results (17)
    Expression_cluster: WBPaper00033065:clk-1(qm30)_upregulated
      WBPaper00033065:cyc-1(RNAi)_downregulated
      WBPaper00037950:A-class-motor-neurons_L2-larva_expressed
      WBPaper00037950:all-neurons_L2-larva_expressed
      WBPaper00037950:bodywall-muscle_L2-larva_expressed
      WBPaper00037950:CEP-sheath-cells_Day1-adult_expressed
      WBPaper00037950:coelomocytes_L1-larva_expressed
      WBPaper00037950:coelomocytes_L2-larva_expressed
      WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed
      WBPaper00037950:GABAergic-motor-neurons_L1-larva_expressed
      WBPaper00037950:hypodermis_L1-larva_expressed
      WBPaper00037950:intestine_L1-larva_expressed
      WBPaper00037950:intestine_L2-larva_expressed
      WBPaper00037950:pharyngeal-muscle_L1-larva_expressed
      WBPaper00038438:D.coniospora_12hr_downregulated_RNAseq
      WBPaper00038438:E.faecalis_24hr_upregulated_RNAseq
      WBPaper00038438:P.lumniescens_24hr_upregulated_RNAseq
      WBPaper00042194:nhr-114(RNAi)_downregulated
      WBPaper00042561:smg-2(RNAi)_upregulated
      WBPaper00042561:smgl-1(RNAi)_upregulated
      WBPaper00042561:smgl-2(RNAi)_upregulated
      WBPaper00044037:eat-2_upregulated
      WBPaper00044426:rotenone_24h_upregulated
      WBPaper00044578:reduced-humidity_downregulated_microarray
      WBPaper00044656:tatn-1(qd182)_upregulated
      WBPaper00044736:oscillating_dev_expression
      WBPaper00045257:bar-1(ga80)_downregulated
      WBPaper00045390:ubc-9(RNAi)_upregulated
      WBPaper00045420:fertilization_downregulated_transcript
      WBPaper00046024:sleep_downregulated_oscillating
      WBPaper00050080:rbr-2(tm3141)_downregulated
      WBPaper00050370:dpy-21(e428)_L3_upregulated
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00050488:daf-2(e1370)_vs_daf-2(e1370);mir-34(gk437)_regulated_dauer_25C
      WBPaper00050488:N2_vs_mir-34(gk437)_regulated_dauer_20C
      WBPaper00050488:N2_vs_mir-34(OverExpression)_regulated_dauer_20C
      WBPaper00053295:lin-22(ot269)_downregulated
      WBPaper00053402:cco-1(RNAi)_upregulated
      WBPaper00054493:hpl-2(tm1489)_upregulated
      WBPaper00055013:hmg-4(RNAi)_upregulated
      WBPaper00055386:daf-2(e1370)_upregulated
      WBPaper00055862:antimycin_damt-1(gk961032)_regulated
      WBPaper00056169:rrf-3(pk1426)_downregulated_L4
      WBPaper00056471:aak-1(tm1944);aak-2(ok524)_upregulated
      WBPaper00056617:adr-1_upregulated_L4_transcript
      WBPaper00057068:numr-1(RNAi)_downregulated
      WBPaper00057068:numr-1(RNAi)_downregulated_Cadmium
      WBPaper00058725:sftb-1(cer6)_downregulated
      WBPaper00059231:alh-6(lax105)_L4_upregulated
      WBPaper00059378:cec-4(ok3124);lmn-1(Y59C)_vs_lmn-1(Y59C)_downregulated
      WBPaper00059839:S.maltophilia_regulated
      WBPaper00059895:wounding_downregulated
      WBPaper00060434:pH4.33_vs_pH6.33_downrgulated
      WBPaper00060445:ikb-1(nr2027)_downregulated_L1
      WBPaper00061527:sre-33-ZK1025.1_8337
      WBPaper00061653:alh-4(hj221)_downregulated
      WBPaper00061753:csr-1(tor159)_upregulated_20C
      WBPaper00062095:unc-4(e120)_upregulated_VA-neuron
      WBPaper00062325:muscle_depleted_coding-RNA
      WBPaper00062440:crh-1(n3315)_upregulated
      WBPaper00062440:crh-1(syb385)_upregulated
      WBPaper00062446:nhr-8(hd117)_upregulated
      WBPaper00064130:Beta-Amyloid_24h_upregulated_mRNA
      WBPaper00064532:pals-25(icb98)_downregulated
      WBPaper00064539:nhr-114(gk849)_downregulated
      WBPaper00064716:paraquat_downregulated
      WBPaper00064769:him-17(me24)_upregulated
      WBPaper00064933:bcf-1(ylf1)_upregulated_transcript
      WBPaper00065096:npr-8(ok1439)_upregulated_Day1_20C
      WBPaper00065288:mdt-15(tm2182)_downregulated
      WBPaper00065823:pmk-1(km25)_upregulated
      WBPaper00065841:33_0
      WBPaper00066232:ash-2(RNAi)_downregulated_WT
      cgc4386_cluster_6_5
      cgc4489_group_24
      WBPaper00026929:sir-2.1_overexpression_regulated
      WBPaper00031003:24hr_muscle_enriched
      WBPaper00031003:hlh_1_enriched
      WBPaper00031003:total_muscle_enriched
      WBPaper00031252:AIN-1_IP_enriched
      WBPaper00031662:spaceflight_upregulated
      WBPaper00040210:Diazinon_24C_regulated
      WBPaper00040858:eQTL_age_regulated_developing
      WBPaper00040858:eQTL_regulated_developing
      WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_48h
      WBPaper00045015:acs-3(ft5)_downregulated
      WBPaper00045015:nhr-25(RNAi)_downregulated
      WBPaper00045960:L4-lethargus_downregulated
      WBPaper00048989:eat-2(ad465)_upregulated_in-DMSO
      [cgc5976]:class_1
    Interaction: WBInteraction000197350
      WBInteraction000232412
      WBInteraction000316859
      WBInteraction000400095
      WBInteraction000585747
  Map_info: Map: V Position: -19.971
    Positive: Positive_clone: F31F4 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00038491
    WBPaper00055090
    WBPaper00055433
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene